# GeneSpring v.4.1 # This is the annotations file for the Master Table of Genes (for both # ORFs and non-ORFs) for genome Pae_G1a_cf. This file contains # annotations for the genes and genetic elements listed in the files # specified by the ORFs and nonORFs entries in your .genomedef file. Systematic Name EC Description Product Phenotype Function Keywords PubMedID Custom Field 1 Custom Field 2 Custom Field 3 Type DBid GO biological process GO molecular function GO cellular component RefSeq UniGene SequenceSource_Affy SequenceDerivedFrom_Affy SequenceDescription_Affy Title_Affy Unigene_Affy LocusLink_Affy SwissProt_Affy EnsembliD_Affy References_Affy GO_BiologicalProcess_Affy GO_Cellular Component_Affy GO_Molecular Function_Affy PathwaysGenMAPP_Affy EC_Num_Affy EC_Def_Affy OrthologsHomologs_Affy InterPro_Affy Pfam_Affy BLOCKS_Affy SCOP_Affy OverlappingTranscripts_Affy Map_Affy Map_GBK ProteinSimilaritiesBLASTP_Affy ProteinSimilaritiesBLASTx_Affy TMM_Affy Protein Families_Affy ID_Hemant Homology_Hemant Pathway_Hemant Biofunction_Hemant Medline_Hemant Rating_Hemant AFFX-Athal_actin_at Arabidopsis thaliana actin-2 mRNA GenBank U37281 U37281 Arabidopsis thaliana actin-2 mRNA U37281 AFFX-Athal_GAPDH_at Arabidopsis thaliana glyceraldehyde 3-phosphate dehydrogenase C subunit (GapC) gene GenBank M64116 M64116 Arabidopsis thaliana glyceraldehyde 3-phosphate dehydrogenase C subunit (GapC) gene M64116 AFFX-Athal_ubq_at Arabidopsis thaliana ubiquitin (UBQ11) gene GenBank U84969 U84969 Arabidopsis thaliana ubiquitin (UBQ11) gene U84969 AFFX-Bsubtilis_dapB_at " Bacillus subtilis dapB, dihydropicolinate reductase, nucleotides 1358-2101" GenBank L38424 "L38424 Bacillus subtilis dapB, dihydropicolinate reductase, nucleotides 1358-2101" L38424 AFFX-Bsubtilis_lys_at " Bacillus subtilis lys, diaminopimelate decarboxylase, nucleotides 362-1345" GenBank X17013 "X17013 Bacillus subtilis lys, diaminopimelate decarboxylase, nucleotides 362-1345" X17013 AFFX-Bsubtilis_pheB_at " Bacillus subtilis pheB, phenylalanine biosynthesis associated protein, nucleotides 2017-2460" GenBank M24537 "M24537 Bacillus subtilis pheB, phenylalanine biosynthesis associated protein, nucleotides 2017-2460" M24537 AFFX-Bsubtilis_thrC_at "Bacillus subtilis thrC, threonine synthase, nucleotides 248-1306" GenBank X04603 "X04603 Bacillus subtilis thrC, threonine synthase, nucleotides 248-1306" X04603 AFFX-Bsubtilis_trpD_at "Bacillus subtilis trpD, TrpD protein, nucleotides 2136-3149" GenBank K01391 "K01391 Bacillus subtilis trpD, TrpD protein, nucleotides 2136-3149" K01391 AFFX-YEL002C_WPB1_at "S.cerevisiae WBP1 Oligosaccharyl transferase beta glycoprotein comples, beta subunit" Stanford Public Database YEL002C "X61388 SGD:YEL002C S.cerevisiae WBP1 Oligosaccharyl transferase beta glycoprotein comples, beta subunit" X61388 AFFX-YEL018W_at S. cerevisiae Hypothetical ORF Stanford Public Database YEL018W U18530 SGD:YEL018W S. cerevisiae Hypothetical ORF U18530 AFFX-YEL024W_RIP1_at S.cerevisiae RIP1 Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex Stanford Public Database YEL024W M23316 SGD:YEL024W S.cerevisiae RIP1 Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex M23316 AFFX-YER022W_SRB4_at S. cerevisiae SRB4 RNA polymerase II holoenzyme/mediator subunit Stanford Public Database YER022W L12026 SGD:YER022W S. cerevisiae SRB4 RNA polymerase II holoenzyme/mediator subunit L12026 AFFX-YER148W_SPT15_at S. cerevisiae SPT15 TFIID subunit Stanford Public Database YER148W X16860 SGD:YER148W S. cerevisiae SPT15 TFIID subunit X16860 AFFX-YFL039C_ACT1_at S. cerevisiae ACT1 Actin Stanford Public Database YFL039C V01288 SGD:YFL039C S. cerevisiae ACT1 Actin V01288 ig_1046911_1047549_at "Intergenic region between PA0981 and PA0982, 1046911-1047549, (+) strand" GenBank 1036911 "Intergenic region between PA0981 and PA0982, 1046911-1047549, (+) strand" AE004531 ig_1047549_1046911_at "Intergenic region between PA0981 and PA0982, 1046911-1047549, (-) strand" GenBank 1036911 "Intergenic region between PA0981 and PA0982, 1046911-1047549, (-) strand" AE004531 ig_1063544_1064555_at "Intergenic region between PA1003 and PA1004, 1063544-1064555, (+) strand" GenBank 1053544 "Intergenic region between PA1003 and PA1004, 1063544-1064555, (+) strand" AE004533 ig_1064555_1063544_at "Intergenic region between PA1003 and PA1004, 1063544-1064555, (-) strand" GenBank 1053544 "Intergenic region between PA1003 and PA1004, 1063544-1064555, (-) strand" AE004533 ig_1087095_1087843_at "Intergenic region between PA1030 and PA1031, 1087095-1087843, (+) strand" GenBank 1077095 "Intergenic region between PA1030 and PA1031, 1087095-1087843, (+) strand" AE004535 ig_1087843_1087095_at "Intergenic region between PA1030 and PA1031, 1087095-1087843, (-) strand" GenBank 1077095 "Intergenic region between PA1030 and PA1031, 1087095-1087843, (-) strand" AE004535 ig_1117390_1118158_at "Intergenic region between PA1112 and PA1113, 1117390-1118158, (+) strand" GenBank 1107390 "Intergenic region between PA1112 and PA1113, 1117390-1118158, (+) strand" AE004541 ig_1118158_1117390_at "Intergenic region between PA1112 and PA1113, 1117390-1118158, (-) strand" GenBank 1107390 "Intergenic region between PA1112 and PA1113, 1117390-1118158, (-) strand" AE004541 ig_1204781_1205771_at "Intergenic region between PA1152 and PA1153, 1204781-1205771, (+) strand" GenBank 1194781 "Intergenic region between PA1152 and PA1153, 1204781-1205771, (+) strand" AE004545 ig_1205771_1204781_at "Intergenic region between PA1152 and PA1153, 1204781-1205771, (-) strand" GenBank 1194781 "Intergenic region between PA1152 and PA1153, 1204781-1205771, (-) strand" AE004545 ig_1246788_1247932_at "Intergenic region between PA1156 and PA1157, 1246788-1247932, (+) strand" GenBank 1236788 "Intergenic region between PA1156 and PA1157, 1246788-1247932, (+) strand" AE004546 ig_1247932_1246788_at "Intergenic region between PA1156 and PA1157, 1246788-1247932, (-) strand" GenBank 1236788 "Intergenic region between PA1156 and PA1157, 1246788-1247932, (-) strand" AE004545 ig_1254309_1255042_at "Intergenic region between PA1221 and PA1222, 1254309-1255042, (+) strand" GenBank 1244309 "Intergenic region between PA1221 and PA1222, 1254309-1255042, (+) strand" AE004552 ig_1255042_1254309_at "Intergenic region between PA1221 and PA1222, 1254309-1255042, (-) strand" GenBank 1244309 "Intergenic region between PA1221 and PA1222, 1254309-1255042, (-) strand" AE004552 ig_1324109_1324793_at "Intergenic region between PA1244 and PA1245, 1324109-1324793, (+) strand" GenBank 1314109 "Intergenic region between PA1244 and PA1245, 1324109-1324793, (+) strand" AE004554 ig_1324793_1324109_at "Intergenic region between PA1244 and PA1245, 1324109-1324793, (-) strand" GenBank 1314109 "Intergenic region between PA1244 and PA1245, 1324109-1324793, (-) strand" AE004554 ig_1348401_1349416_at "Intergenic region between PA1316 and PA1317, 1348401-1349416, (+) strand" GenBank 1338401 "Intergenic region between PA1316 and PA1317, 1348401-1349416, (+) strand" AE004561 ig_1349416_1348401_at "Intergenic region between PA1316 and PA1317, 1348401-1349416, (-) strand" GenBank 1338401 "Intergenic region between PA1316 and PA1317, 1348401-1349416, (-) strand" AE004561 ig_1427453_1428080_at "Intergenic region between PA1372 and PA1373, 1427453-1428080, (+) strand" GenBank 1417453 "Intergenic region between PA1372 and PA1373, 1427453-1428080, (+) strand" AE004567 ig_1428080_1427453_at "Intergenic region between PA1372 and PA1373, 1427453-1428080, (-) strand" GenBank 1417453 "Intergenic region between PA1372 and PA1373, 1427453-1428080, (-) strand" AE004567 ig_1489095_1489815_at "Intergenic region between PA1427 and PA1428, 1489095-1489815, (+) strand" GenBank 1479095 "Intergenic region between PA1427 and PA1428, 1489095-1489815, (+) strand" AE004572 ig_1489815_1489095_at "Intergenic region between PA1427 and PA1428, 1489095-1489815, (-) strand" GenBank 1479095 "Intergenic region between PA1427 and PA1428, 1489095-1489815, (-) strand" AE004572 ig_1553675_1554415_at "Intergenic region between PA1507 and PA1508, 1553675-1554415, (+) strand" GenBank 1543675 "Intergenic region between PA1507 and PA1508, 1553675-1554415, (+) strand" AE004579 ig_1554415_1553675_at "Intergenic region between PA1507 and PA1508, 1553675-1554415, (-) strand" GenBank 1543675 "Intergenic region between PA1507 and PA1508, 1553675-1554415, (-) strand" AE004579 ig_1637696_1638379_at "Intergenic region between PA1655 and PA1656, 1637696-1638379, (+) strand" GenBank 1627696 "Intergenic region between PA1655 and PA1656, 1637696-1638379, (+) strand" AE004593 ig_1638379_1637696_at "Intergenic region between PA1655 and PA1656, 1637696-1638379, (-) strand" GenBank 1627696 "Intergenic region between PA1655 and PA1656, 1637696-1638379, (-) strand" AE004593 ig_1802453_1803626_at "Intergenic region between PA1796 and PA1797, 1802453-1803626, (+) strand" GenBank 1792453 "Intergenic region between PA1796 and PA1797, 1802453-1803626, (+) strand" AE004605 ig_1803626_1802453_at "Intergenic region between PA1796 and PA1797, 1802453-1803626, (-) strand" GenBank 1792453 "Intergenic region between PA1796 and PA1797, 1802453-1803626, (-) strand" AE004605 ig_188448_189120_at "Intergenic region between PA0194 and PA0195, 188448-189120, (+) strand" GenBank 178448 "Intergenic region between PA0194 and PA0195, 188448-189120, (+) strand" AE004457 ig_189120_188448_at "Intergenic region between PA0194 and PA0195, 188448-189120, (-) strand" GenBank 178448 "Intergenic region between PA0194 and PA0195, 188448-189120, (-) strand" AE004457 ig_1947041_1948502_at "Intergenic region between PA1838 and PA1839, 1947041-1948502, (+) strand" GenBank 1937041 "Intergenic region between PA1838 and PA1839, 1947041-1948502, (+) strand" AE004610 ig_1948502_1947041_at "Intergenic region between PA1838 and PA1839, 1947041-1948502, (-) strand" GenBank 1937041 "Intergenic region between PA1838 and PA1839, 1947041-1948502, (-) strand" AE004610 ig_1996806_1997509_at "Intergenic region between PA1897 and PA1898, 1996806-1997509, (+) strand" GenBank 1986806 "Intergenic region between PA1897 and PA1898, 1996806-1997509, (+) strand" AE004616 ig_1997509_1996806_at "Intergenic region between PA1897 and PA1898, 1996806-1997509, (-) strand" GenBank 1986806 "Intergenic region between PA1897 and PA1898, 1996806-1997509, (-) strand" AE004616 ig_2068728_2069490_at "Intergenic region between PA1934 and PA1935, 2068728-2069490, (+) strand" GenBank 2058728 "Intergenic region between PA1934 and PA1935, 2068728-2069490, (+) strand" AE004620 ig_2069490_2068728_at "Intergenic region between PA1934 and PA1935, 2068728-2069490, (-) strand" GenBank 2058728 "Intergenic region between PA1934 and PA1935, 2068728-2069490, (-) strand" AE004620 ig_2116265_2117030_at "Intergenic region between PA1978 and PA1979, 2116265-2117030, (+) strand" GenBank 2106265 "Intergenic region between PA1978 and PA1979, 2116265-2117030, (+) strand" AE004624 ig_2117030_2116265_at "Intergenic region between PA1978 and PA1979, 2116265-2117030, (-) strand" GenBank 2106265 "Intergenic region between PA1978 and PA1979, 2116265-2117030, (-) strand" AE004624 ig_2164548_2165213_at "Intergenic region between PA2035 and PA2036, 2164548-2165213, (+) strand" GenBank 2154548 "Intergenic region between PA2035 and PA2036, 2164548-2165213, (+) strand" AE004630 ig_2165213_2164548_at "Intergenic region between PA2035 and PA2036, 2164548-2165213, (-) strand" GenBank 2154548 "Intergenic region between PA2035 and PA2036, 2164548-2165213, (-) strand" AE004630 ig_2226144_2226879_at "Intergenic region between PA2046 and PA2047, 2226144-2226879, (+) strand" GenBank 2216144 "Intergenic region between PA2046 and PA2047, 2226144-2226879, (+) strand" AE004631 ig_2226879_2226144_at "Intergenic region between PA2046 and PA2047, 2226144-2226879, (-) strand" GenBank 2216144 "Intergenic region between PA2046 and PA2047, 2226144-2226879, (-) strand" AE004631 ig_223454_224101_at "Intergenic region between PA0263 and PA0264, 223454-224101, (+) strand" GenBank 213454 "Intergenic region between PA0263 and PA0264, 223454-224101, (+) strand" AE004464 ig_2239267_2240302_at "Intergenic region between PA2049 and PA2050, 2239267-2240302, (+) strand" GenBank 2229267 "Intergenic region between PA2049 and PA2050, 2239267-2240302, (+) strand" AE004631 ig_2240302_2239267_at "Intergenic region between PA2049 and PA2050, 2239267-2240302, (-) strand" GenBank 2229267 "Intergenic region between PA2049 and PA2050, 2239267-2240302, (-) strand" AE004631 ig_224101_223454_at "Intergenic region between PA0263 and PA0264, 223454-224101, (-) strand" GenBank 213454 "Intergenic region between PA0263 and PA0264, 223454-224101, (-) strand" AE004464 ig_2243603_2244492_at "Intergenic region between PA2056 and PA2057, 2243603-2244492, (+) strand" GenBank 2233603 "Intergenic region between PA2056 and PA2057, 2243603-2244492, (+) strand" AE004632 ig_2244492_2243603_at "Intergenic region between PA2056 and PA2057, 2243603-2244492, (-) strand" GenBank 2233603 "Intergenic region between PA2056 and PA2057, 2243603-2244492, (-) strand" AE004632 ig_2250595_2251275_at "Intergenic region between PA2075 and PA2076, 2250595-2251275, (+) strand" GenBank 2240595 "Intergenic region between PA2075 and PA2076, 2250595-2251275, (+) strand" AE004635 ig_2251275_2250595_at "Intergenic region between PA2075 and PA2076, 2250595-2251275, (-) strand" GenBank 2240595 "Intergenic region between PA2075 and PA2076, 2250595-2251275, (-) strand" AE004635 ig_2281578_2282480_at "Intergenic region between PA2127 and PA2128, 2281578-2282480, (+) strand" GenBank 2271578 "Intergenic region between PA2127 and PA2128, 2281578-2282480, (+) strand" AE004640 ig_2282480_2281578_at "Intergenic region between PA2127 and PA2128, 2281578-2282480, (-) strand" GenBank 2271578 "Intergenic region between PA2127 and PA2128, 2281578-2282480, (-) strand" AE004640 ig_2341640_2342493_at "Intergenic region between PA2228 and PA2229, 2341640-2342493, (+) strand" GenBank 2331640 "Intergenic region between PA2228 and PA2229, 2341640-2342493, (+) strand" AE004649 ig_2342493_2341640_at "Intergenic region between PA2228 and PA2229, 2341640-2342493, (-) strand" GenBank 2331640 "Intergenic region between PA2228 and PA2229, 2341640-2342493, (-) strand" AE004649 ig_2450765_2451707_at "Intergenic region between PA2319 and PA2320, 2450765-2451707, (+) strand" GenBank 2440765 "Intergenic region between PA2319 and PA2320, 2450765-2451707, (+) strand" AE004658 ig_2451707_2450765_at "Intergenic region between PA2319 and PA2320, 2450765-2451707, (-) strand" GenBank 2440765 "Intergenic region between PA2319 and PA2320, 2450765-2451707, (-) strand" AE004657 ig_2557964_2558918_s_at "Intergenic region between PA2326 and PA2327, 2557964-2558918, (+) strand" GenBank 2547964 "Intergenic region between PA2326 and PA2327, 2557964-2558918, (+) strand" AE004658 ig_2558918_2557964_s_at "Intergenic region between PA2326 and PA2327, 2557964-2558918, (-) strand" GenBank 2547964 "Intergenic region between PA2326 and PA2327, 2557964-2558918, (-) strand" AE004659 ig_2568284_2568929_at "Intergenic region between PA2425 and PA2426, 2568284-2568929, (+) strand" GenBank 2558284 "Intergenic region between PA2425 and PA2426, 2568284-2568929, (+) strand" AE004670 ig_2568929_2568284_at "Intergenic region between PA2425 and PA2426, 2568284-2568929, (-) strand" GenBank 2558284 "Intergenic region between PA2425 and PA2426, 2568284-2568929, (-) strand" AE004670 ig_2721530_2722174_at "Intergenic region between PA2439 and PA2440, 2721530-2722174, (+) strand" GenBank 2711530 "Intergenic region between PA2439 and PA2440, 2721530-2722174, (+) strand" AE004671 ig_2722174_2721530_at "Intergenic region between PA2439 and PA2440, 2721530-2722174, (-) strand" GenBank 2711530 "Intergenic region between PA2439 and PA2440, 2721530-2722174, (-) strand" AE004671 ig_2737193_2737881_at "Intergenic region between PA2559 and PA2560, 2737193-2737881, (+) strand" GenBank 2727193 "Intergenic region between PA2559 and PA2560, 2737193-2737881, (+) strand" AE004684 ig_2737881_2737193_at "Intergenic region between PA2559 and PA2560, 2737193-2737881, (-) strand" GenBank 2727193 "Intergenic region between PA2559 and PA2560, 2737193-2737881, (-) strand" AE004684 ig_2893827_2894451_at "Intergenic region between PA2566 and PA2567, 2893827-2894451, (+) strand" GenBank 2883827 "Intergenic region between PA2566 and PA2567, 2893827-2894451, (+) strand" AE004685 ig_2894451_2893827_at "Intergenic region between PA2566 and PA2567, 2893827-2894451, (-) strand" GenBank 2883827 "Intergenic region between PA2566 and PA2567, 2893827-2894451, (-) strand" AE004685 ig_2901558_2902217_at "Intergenic region between PA2570 and PA2571, 2901558-2902217, (+) strand" GenBank 2891558 "Intergenic region between PA2570 and PA2571, 2901558-2902217, (+) strand" AE004685 ig_2902217_2901558_at "Intergenic region between PA2570 and PA2571, 2901558-2902217, (-) strand" GenBank 2891558 "Intergenic region between PA2570 and PA2571, 2901558-2902217, (-) strand" AE004685 ig_2905549_2906165_at "Intergenic region between PA2581 and PA2582, 2905549-2906165, (+) strand" GenBank 2895549 "Intergenic region between PA2581 and PA2582, 2905549-2906165, (+) strand" AE004686 ig_2906165_2905549_at "Intergenic region between PA2581 and PA2582, 2905549-2906165, (-) strand" GenBank 2895549 "Intergenic region between PA2581 and PA2582, 2905549-2906165, (-) strand" AE004686 ig_2918211_2918966_at "Intergenic region between PA2583 and PA2584, 2918211-2918966, (+) strand" GenBank 2908211 "Intergenic region between PA2583 and PA2584, 2918211-2918966, (+) strand" AE004686 ig_2918966_2918211_at "Intergenic region between PA2583 and PA2584, 2918211-2918966, (-) strand" GenBank 2908211 "Intergenic region between PA2583 and PA2584, 2918211-2918966, (-) strand" AE004687 ig_2922568_2923366_at "Intergenic region between PA2587 and PA2588, 2922568-2923366, (+) strand" GenBank 2912568 "Intergenic region between PA2587 and PA2588, 2922568-2923366, (+) strand" AE004687 ig_2923366_2922568_at "Intergenic region between PA2587 and PA2588, 2922568-2923366, (-) strand" GenBank 2912568 "Intergenic region between PA2587 and PA2588, 2922568-2923366, (-) strand" AE004687 ig_2927920_2928538_at "Intergenic region between PA2698 and PA2699, 2927920-2928538, (+) strand" GenBank 2917920 "Intergenic region between PA2698 and PA2699, 2927920-2928538, (+) strand" AE004698 ig_2928538_2927920_at "Intergenic region between PA2698 and PA2699, 2927920-2928538, (-) strand" GenBank 2917920 "Intergenic region between PA2698 and PA2699, 2927920-2928538, (-) strand" AE004698 ig_297561_299081_at "Intergenic region between PA0290 and PA0291, 297561-299081, (+) strand" GenBank 287561 "Intergenic region between PA0290 and PA0291, 297561-299081, (+) strand" AE004467 ig_299081_297561_at "Intergenic region between PA0290 and PA0291, 297561-299081, (-) strand" GenBank 287561 "Intergenic region between PA0290 and PA0291, 297561-299081, (-) strand" AE004467 ig_3051348_3051956_at "Intergenic region between PA2729 and PA2730, 3051348-3051956, (+) strand" GenBank 3041348 "Intergenic region between PA2729 and PA2730, 3051348-3051956, (+) strand" AE004701 ig_3051956_3051348_at "Intergenic region between PA2729 and PA2730, 3051348-3051956, (-) strand" GenBank 3041348 "Intergenic region between PA2729 and PA2730, 3051348-3051956, (-) strand" AE004701 ig_3087490_3088659_at "Intergenic region between PA2750 and PA2751, 3087490-3088659, (+) strand" GenBank 3077490 "Intergenic region between PA2750 and PA2751, 3087490-3088659, (+) strand" AE004703 ig_3088659_3087490_at "Intergenic region between PA2750 and PA2751, 3087490-3088659, (-) strand" GenBank 3077490 "Intergenic region between PA2750 and PA2751, 3087490-3088659, (-) strand" AE004703 ig_3112150_3112877_at "Intergenic region between PA2754 and PA2755, 3112150-3112877, (+) strand" GenBank 3102150 "Intergenic region between PA2754 and PA2755, 3112150-3112877, (+) strand" AE004703 ig_3112877_3112150_at "Intergenic region between PA2754 and PA2755, 3112150-3112877, (-) strand" GenBank 3102150 "Intergenic region between PA2754 and PA2755, 3112150-3112877, (-) strand" AE004703 ig_3115632_3116653_at "Intergenic region between PA2763 and PA2764, 3115632-3116653, (+) strand" GenBank 3105632 "Intergenic region between PA2763 and PA2764, 3115632-3116653, (+) strand" AE004704 ig_3116653_3115632_at "Intergenic region between PA2763 and PA2764, 3115632-3116653, (-) strand" GenBank 3105632 "Intergenic region between PA2763 and PA2764, 3115632-3116653, (-) strand" AE004704 ig_3122585_3123598_at "Intergenic region between PA2770 and PA2771, 3122585-3123598, (+) strand" GenBank 3112585 "Intergenic region between PA2770 and PA2771, 3122585-3123598, (+) strand" AE004705 ig_3123598_3122585_at "Intergenic region between PA2770 and PA2771, 3122585-3123598, (-) strand" GenBank 3112585 "Intergenic region between PA2770 and PA2771, 3122585-3123598, (-) strand" AE004705 ig_3129070_3129728_at "Intergenic region between PA2852 and PA2853, 3129070-3129728, (+) strand" GenBank 3119070 "Intergenic region between PA2852 and PA2853, 3129070-3129728, (+) strand" AE004712 ig_3129728_3129070_at "Intergenic region between PA2852 and PA2853, 3129070-3129728, (-) strand" GenBank 3119070 "Intergenic region between PA2852 and PA2853, 3129070-3129728, (-) strand" AE004712 ig_3206252_3206914_at "Intergenic region between PA2910 and PA2911, 3206252-3206914, (+) strand" GenBank 3196252 "Intergenic region between PA2910 and PA2911, 3206252-3206914, (+) strand" AE004717 ig_3206914_3206252_at "Intergenic region between PA2910 and PA2911, 3206252-3206914, (-) strand" GenBank 3196252 "Intergenic region between PA2910 and PA2911, 3206252-3206914, (-) strand" AE004717 ig_3265210_3265847_at "Intergenic region between PA3094 and PA3095, 3265210-3265847, (+) strand" GenBank 3255210 "Intergenic region between PA3094 and PA3095, 3265210-3265847, (+) strand" AE004734 ig_3265847_3265210_at "Intergenic region between PA3094 and PA3095, 3265210-3265847, (-) strand" GenBank 3255210 "Intergenic region between PA3094 and PA3095, 3265210-3265847, (-) strand" AE004734 ig_326671_327284_at "Intergenic region between PA0458 and PA0459, 326671-327284, (+) strand" GenBank 316671 "Intergenic region between PA0458 and PA0459, 326671-327284, (+) strand" AE004483 ig_327284_326671_at "Intergenic region between PA0458 and PA0459, 326671-327284, (-) strand" GenBank 316671 "Intergenic region between PA0458 and PA0459, 326671-327284, (-) strand" AE004483 ig_3475169_3475955_at "Intergenic region between PA3133 and PA3134, 3475169-3475955, (+) strand" GenBank 3465169 "Intergenic region between PA3133 and PA3134, 3475169-3475955, (+) strand" AE004737 ig_3475955_3475169_at "Intergenic region between PA3133 and PA3134, 3475169-3475955, (-) strand" GenBank 3465169 "Intergenic region between PA3133 and PA3134, 3475169-3475955, (-) strand" AE004737 ig_3514564_3515415_at "Intergenic region between PA3141 and PA3142, 3514564-3515415, (+) strand" GenBank 3504564 "Intergenic region between PA3141 and PA3142, 3514564-3515415, (+) strand" AE004738 ig_3515415_3514564_at "Intergenic region between PA3141 and PA3142, 3514564-3515415, (-) strand" GenBank 3504564 "Intergenic region between PA3141 and PA3142, 3514564-3515415, (-) strand" AE004738 ig_3526677_3527428_at "Intergenic region between PA3159 and PA3160, 3526677-3527428, (+) strand" GenBank 3516677 "Intergenic region between PA3159 and PA3160, 3526677-3527428, (+) strand" AE004740 ig_3527428_3526677_at "Intergenic region between PA3159 and PA3160, 3526677-3527428, (-) strand" GenBank 3516677 "Intergenic region between PA3159 and PA3160, 3526677-3527428, (-) strand" AE004740 ig_3545073_3545880_at "Intergenic region between PA3160 and PA3161, 3545073-3545880, (+) strand" GenBank 3535073 "Intergenic region between PA3160 and PA3161, 3545073-3545880, (+) strand" AE004740 ig_3545880_3545073_at "Intergenic region between PA3160 and PA3161, 3545073-3545880, (-) strand" GenBank 3535073 "Intergenic region between PA3160 and PA3161, 3545073-3545880, (-) strand" AE004740 ig_3546926_3547688_at "Intergenic region between PA3261 and PA3262, 3546926-3547688, (+) strand" GenBank 3536926 "Intergenic region between PA3261 and PA3262, 3546926-3547688, (+) strand" AE004748 ig_3547688_3546926_at "Intergenic region between PA3261 and PA3262, 3546926-3547688, (-) strand" GenBank 3536926 "Intergenic region between PA3261 and PA3262, 3546926-3547688, (-) strand" AE004748 ig_3648915_3649704_at "Intergenic region between PA3284 and PA3285, 3648915-3649704, (+) strand" GenBank 3638915 "Intergenic region between PA3284 and PA3285, 3648915-3649704, (+) strand" AE004750 ig_3649704_3648915_at "Intergenic region between PA3284 and PA3285, 3648915-3649704, (-) strand" GenBank 3638915 "Intergenic region between PA3284 and PA3285, 3648915-3649704, (-) strand" AE004750 ig_3677080_3677719_at "Intergenic region between PA3305 and PA3306, 3677080-3677719, (+) strand" GenBank 3667080 "Intergenic region between PA3305 and PA3306, 3677080-3677719, (+) strand" AE004753 ig_3677719_3677080_at "Intergenic region between PA3305 and PA3306, 3677080-3677719, (-) strand" GenBank 3667080 "Intergenic region between PA3305 and PA3306, 3677080-3677719, (-) strand" AE004753 ig_3705160_3705889_at "Intergenic region between PA3463 and PA3464, 3705160-3705889, (+) strand" GenBank 3695160 "Intergenic region between PA3463 and PA3464, 3705160-3705889, (+) strand" AE004767 ig_3705889_3705160_at "Intergenic region between PA3463 and PA3464, 3705160-3705889, (-) strand" GenBank 3695160 "Intergenic region between PA3463 and PA3464, 3705160-3705889, (-) strand" AE004767 ig_3874653_3873835_r_at "Intergenic region between PA3539 and PA3540, 3873835-3874653, (-) strand" GenBank 3863835 "Intergenic region between PA3539 and PA3540, 3873835-3874653, (-) strand" AE004774 ig_3961922_3962824_at "Intergenic region between PA3781 and PA3782, 3961922-3962824, (+) strand" GenBank 3951922 "Intergenic region between PA3781 and PA3782, 3961922-3962824, (+) strand" AE004797 ig_3962824_3961922_at "Intergenic region between PA3781 and PA3782, 3961922-3962824, (-) strand" GenBank 3951922 "Intergenic region between PA3781 and PA3782, 3961922-3962824, (-) strand" AE004797 ig_4240578_4241341_at "Intergenic region between PA3835 and PA3836, 4240578-4241341, (+) strand" GenBank 4230578 "Intergenic region between PA3835 and PA3836, 4240578-4241341, (+) strand" AE004801 ig_4241341_4240578_at "Intergenic region between PA3835 and PA3836, 4240578-4241341, (-) strand" GenBank 4230578 "Intergenic region between PA3835 and PA3836, 4240578-4241341, (-) strand" AE004801 ig_4294604_4297249_at "Intergenic region between PA3860 and PA3861, 4294604-4297249, (+) strand" GenBank 4284604 "Intergenic region between PA3860 and PA3861, 4294604-4297249, (+) strand" AE004803 ig_4297249_4294604_at "Intergenic region between PA3860 and PA3861, 4294604-4297249, (-) strand" GenBank 4284604 "Intergenic region between PA3860 and PA3861, 4294604-4297249, (-) strand" AE004803 ig_4320819_4321433_at "Intergenic region between PA3865 and PA3866, 4320819-4321433, (+) strand" GenBank 4310819 "Intergenic region between PA3865 and PA3866, 4320819-4321433, (+) strand" AE004804 ig_4321433_4320819_at "Intergenic region between PA3865 and PA3866, 4320819-4321433, (-) strand" GenBank 4310819 "Intergenic region between PA3865 and PA3866, 4320819-4321433, (-) strand" AE004804 ig_4326394_4327696_at "Intergenic region between PA3969 and PA3970, 4326394-4327696, (+) strand" GenBank 4316394 "Intergenic region between PA3969 and PA3970, 4326394-4327696, (+) strand" AE004815 ig_4327696_4326394_at "Intergenic region between PA3969 and PA3970, 4326394-4327696, (-) strand" GenBank 4316394 "Intergenic region between PA3969 and PA3970, 4326394-4327696, (-) strand" AE004815 ig_4448217_4448892_at "Intergenic region between PA4028 and PA4029, 4448217-4448892, (+) strand" GenBank 4438217 "Intergenic region between PA4028 and PA4029, 4448217-4448892, (+) strand" AE004820 ig_4448892_4448217_at "Intergenic region between PA4028 and PA4029, 4448217-4448892, (-) strand" GenBank 4438217 "Intergenic region between PA4028 and PA4029, 4448217-4448892, (-) strand" AE004820 ig_4509996_4510970_at "Intergenic region between PA4080 and PA4081, 4509996-4510970, (+) strand" GenBank 4499996 "Intergenic region between PA4080 and PA4081, 4509996-4510970, (+) strand" AE004824 ig_4510970_4509996_at "Intergenic region between PA4080 and PA4081, 4509996-4510970, (-) strand" GenBank 4499996 "Intergenic region between PA4080 and PA4081, 4509996-4510970, (-) strand" AE004824 ig_4559649_4560294_at "Intergenic region between PA4100 and PA4101, 4559649-4560294, (+) strand" GenBank 4549649 "Intergenic region between PA4100 and PA4101, 4559649-4560294, (+) strand" AE004826 ig_4560294_4559649_at "Intergenic region between PA4100 and PA4101, 4559649-4560294, (-) strand" GenBank 4549649 "Intergenic region between PA4100 and PA4101, 4559649-4560294, (-) strand" AE004826 ig_4584530_4585148_at "Intergenic region between PA4138 and PA4139, 4584530-4585148, (+) strand" GenBank 4574530 "Intergenic region between PA4138 and PA4139, 4584530-4585148, (+) strand" AE004830 ig_4585148_4584530_at "Intergenic region between PA4138 and PA4139, 4584530-4585148, (-) strand" GenBank 4574530 "Intergenic region between PA4138 and PA4139, 4584530-4585148, (-) strand" AE004830 ig_4629184_4629943_at "Intergenic region between PA4204 and PA4205, 4629184-4629943, (+) strand" GenBank 4619184 "Intergenic region between PA4204 and PA4205, 4629184-4629943, (+) strand" AE004837 ig_4629943_4629184_at "Intergenic region between PA4204 and PA4205, 4629184-4629943, (-) strand" GenBank 4619184 "Intergenic region between PA4204 and PA4205, 4629184-4629943, (-) strand" AE004837 ig_4705304_4705955_at "Intergenic region between PA4209 and PA4210, 4705304-4705955, (+) strand" GenBank 4695304 "Intergenic region between PA4209 and PA4210, 4705304-4705955, (+) strand" AE004837 ig_4705955_4705304_at "Intergenic region between PA4209 and PA4210, 4705304-4705955, (-) strand" GenBank 4695304 "Intergenic region between PA4209 and PA4210, 4705304-4705955, (-) strand" AE004838 ig_4713098_4713795_at "Intergenic region between PA4280 and PA4281, 4713098-4713795, (+) strand" GenBank 4703098 "Intergenic region between PA4280 and PA4281, 4713098-4713795, (+) strand" AE004844 ig_4713795_4713098_at "Intergenic region between PA4280 and PA4281, 4713098-4713795, (-) strand" GenBank 4703098 "Intergenic region between PA4280 and PA4281, 4713098-4713795, (-) strand" AE004844 ig_4888194_4889111_at "Intergenic region between PA4421 and PA4422, 4888194-4889111, (+) strand" GenBank 4878194 "Intergenic region between PA4421 and PA4422, 4888194-4889111, (+) strand" AE004857 ig_4889111_4888194_at "Intergenic region between PA4421 and PA4422, 4888194-4889111, (-) strand" GenBank 4878194 "Intergenic region between PA4421 and PA4422, 4888194-4889111, (-) strand" AE004857 ig_4956028_4956733_at "Intergenic region between PA4541 and PA4542, 4956028-4956733, (+) strand" GenBank 4946028 "Intergenic region between PA4541 and PA4542, 4956028-4956733, (+) strand" AE004868 ig_4956733_4956028_at "Intergenic region between PA4541 and PA4542, 4956028-4956733, (-) strand" GenBank 4946028 "Intergenic region between PA4541 and PA4542, 4956028-4956733, (-) strand" AE004868 ig_5086695_5087407_at "Intergenic region between PA4581 and PA4582, 5086695-5087407, (+) strand" GenBank 5076695 "Intergenic region between PA4581 and PA4582, 5086695-5087407, (+) strand" AE004872 ig_5087407_5086695_at "Intergenic region between PA4581 and PA4582, 5086695-5087407, (-) strand" GenBank 5076695 "Intergenic region between PA4581 and PA4582, 5086695-5087407, (-) strand" AE004872 ig_5130767_5131427_at "Intergenic region between PA4639 and PA4640, 5130767-5131427, (+) strand" GenBank 5120767 "Intergenic region between PA4639 and PA4640, 5130767-5131427, (+) strand" AE004878 ig_5131427_5130767_at "Intergenic region between PA4639 and PA4640, 5130767-5131427, (-) strand" GenBank 5120767 "Intergenic region between PA4639 and PA4640, 5130767-5131427, (-) strand" AE004878 ig_517462_518083_at "Intergenic region between PA0484 and PA0485, 517462-518083, (+) strand" GenBank 507462 "Intergenic region between PA0484 and PA0485, 517462-518083, (+) strand" AE004486 ig_518083_517462_at "Intergenic region between PA0484 and PA0485, 517462-518083, (-) strand" GenBank 507462 "Intergenic region between PA0484 and PA0485, 517462-518083, (-) strand" AE004486 ig_5207621_5208463_at "Intergenic region between PA4674 and PA4675, 5207621-5208463, (+) strand" GenBank 5197621 "Intergenic region between PA4674 and PA4675, 5207621-5208463, (+) strand" AE004881 ig_5208463_5207621_at "Intergenic region between PA4674 and PA4675, 5207621-5208463, (-) strand" GenBank 5197621 "Intergenic region between PA4674 and PA4675, 5207621-5208463, (-) strand" AE004881 ig_5242558_5243177_at "Intergenic region between PA4690 and PA4691, 5242558-5243177, (+) strand" GenBank 5232558 "Intergenic region between PA4690 and PA4691, 5242558-5243177, (+) strand" AE004883 ig_5243177_5242558_at "Intergenic region between PA4690 and PA4691, 5242558-5243177, (-) strand" GenBank 5232558 "Intergenic region between PA4690 and PA4691, 5242558-5243177, (-) strand" AE004883 ig_5308424_5309325_at "Intergenic region between PA4858 and PA4859, 5308424-5309325, (+) strand" GenBank 5298424 "Intergenic region between PA4858 and PA4859, 5308424-5309325, (+) strand" AE004899 ig_5309325_5308424_at "Intergenic region between PA4858 and PA4859, 5308424-5309325, (-) strand" GenBank 5298424 "Intergenic region between PA4858 and PA4859, 5308424-5309325, (-) strand" AE004899 ig_53521_56546_at "Intergenic region between PA0049 and PA0050, 53521-56546, (+) strand" GenBank 43521 "Intergenic region between PA0049 and PA0050, 53521-56546, (+) strand" AE004444 ig_545644_546334_at "Intergenic region between PA0574 and PA0575, 545644-546334, (+) strand" GenBank 535644 "Intergenic region between PA0574 and PA0575, 545644-546334, (+) strand" AE004493 ig_5457716_5458499_i_at "Intergenic region between PA4913 and PA4914, 5457716-5458499, (+) strand" GenBank 5447716 "Intergenic region between PA4913 and PA4914, 5457716-5458499, (+) strand" AE004904 ig_5458499_5457716_at "Intergenic region between PA4913 and PA4914, 5457716-5458499, (-) strand" GenBank 5447716 "Intergenic region between PA4913 and PA4914, 5457716-5458499, (-) strand" AE004904 ig_546334_545644_at "Intergenic region between PA0574 and PA0575, 545644-546334, (-) strand" GenBank 535644 "Intergenic region between PA0574 and PA0575, 545644-546334, (-) strand" AE004493 ig_5513111_5513731_at "Intergenic region between PA4937 and PA4938, 5513111-5513731, (+) strand" GenBank 5503111 "Intergenic region between PA4937 and PA4938, 5513111-5513731, (+) strand" AE004907 ig_5513731_5513111_at "Intergenic region between PA4937 and PA4938, 5513111-5513731, (-) strand" GenBank 5503111 "Intergenic region between PA4937 and PA4938, 5513111-5513731, (-) strand" AE004907 ig_5541409_5542072_at "Intergenic region between PA4957 and PA4958, 5541409-5542072, (+) strand" GenBank 5531409 "Intergenic region between PA4957 and PA4958, 5541409-5542072, (+) strand" AE004908 ig_5542072_5541409_at "Intergenic region between PA4957 and PA4958, 5541409-5542072, (-) strand" GenBank 5531409 "Intergenic region between PA4957 and PA4958, 5541409-5542072, (-) strand" AE004908 ig_5563286_5563964_at "Intergenic region between PA5125 and PA5126, 5563286-5563964, (+) strand" GenBank 5553286 "Intergenic region between PA5125 and PA5126, 5563286-5563964, (+) strand" AE004926 ig_5563964_5563286_at "Intergenic region between PA5125 and PA5126, 5563286-5563964, (-) strand" GenBank 5553286 "Intergenic region between PA5125 and PA5126, 5563286-5563964, (-) strand" AE004926 ig_56546_53521_at "Intergenic region between PA0049 and PA0050, 53521-56546, (-) strand" GenBank 43521 "Intergenic region between PA0049 and PA0050, 53521-56546, (-) strand" AE004444 ig_5774806_5775619_at "Intergenic region between PA5169 and PA5170, 5774806-5775619, (+) strand" GenBank 5764806 "Intergenic region between PA5169 and PA5170, 5774806-5775619, (+) strand" AE004930 ig_5775619_5774806_at "Intergenic region between PA5169 and PA5170, 5774806-5775619, (-) strand" GenBank 5764806 "Intergenic region between PA5169 and PA5170, 5774806-5775619, (-) strand" AE004930 ig_5820113_5820909_at "Intergenic region between PA5321 and PA5322, 5820113-5820909, (+) strand" GenBank 5810113 "Intergenic region between PA5321 and PA5322, 5820113-5820909, (+) strand" AE004945 ig_5820909_5820113_at "Intergenic region between PA5321 and PA5322, 5820113-5820909, (-) strand" GenBank 5810113 "Intergenic region between PA5321 and PA5322, 5820113-5820909, (-) strand" AE004945 ig_5991130_5992382_at "Intergenic region between PA5369 and PA5370, 5991130-5992382, (+) strand" GenBank 5981130 "Intergenic region between PA5369 and PA5370, 5991130-5992382, (+) strand" AE004949 ig_5992382_5991130_at "Intergenic region between PA5369 and PA5370, 5991130-5992382, (-) strand" GenBank 5981130 "Intergenic region between PA5369 and PA5370, 5991130-5992382, (-) strand" AE004949 ig_6090705_6092045_at "Intergenic region between PA5440 and PA5441, 6090705-6092045, (+) strand" GenBank 6080705 "Intergenic region between PA5440 and PA5441, 6090705-6092045, (+) strand" AE004957 ig_6092045_6090705_at "Intergenic region between PA5440 and PA5441, 6090705-6092045, (-) strand" GenBank 6080705 "Intergenic region between PA5440 and PA5441, 6090705-6092045, (-) strand" AE004957 ig_6125079_6125795_at "Intergenic region between and , 6125079-6125795, (+) strand" GenBank 6115079 "Intergenic region between and , 6125079-6125795, (+) strand" ig_6125795_6125079_at "Intergenic region between and , 6125079-6125795, (-) strand" GenBank 6115079 "Intergenic region between and , 6125079-6125795, (-) strand" ig_629884_630527_at "Intergenic region between PA0668 and PA0669, 629884-630527, (+) strand" GenBank 619884 "Intergenic region between PA0668 and PA0669, 629884-630527, (+) strand" AE004502 ig_630527_629884_at "Intergenic region between PA0668 and PA0669, 629884-630527, (-) strand" GenBank 619884 "Intergenic region between PA0668 and PA0669, 629884-630527, (-) strand" AE004502 ig_64729_65339_at "Intergenic region between PA0050 and PA0051, 64729-65339, (+) strand" GenBank 54729 "Intergenic region between PA0050 and PA0051, 64729-65339, (+) strand" AE004445 ig_65339_64729_at "Intergenic region between PA0050 and PA0051, 64729-65339, (-) strand" GenBank 54729 "Intergenic region between PA0050 and PA0051, 64729-65339, (-) strand" AE004445 ig_65479_66303_at "Intergenic region between PA0052 and PA0053, 65479-66303, (+) strand" GenBank 55479 "Intergenic region between PA0052 and PA0053, 65479-66303, (+) strand" AE004445 ig_66303_65479_at "Intergenic region between PA0052 and PA0053, 65479-66303, (-) strand" GenBank 55479 "Intergenic region between PA0052 and PA0053, 65479-66303, (-) strand" AE004445 ig_68616_69272_at "Intergenic region between PA0164 and PA0165, 68616-69272, (+) strand" GenBank 58616 "Intergenic region between PA0164 and PA0165, 68616-69272, (+) strand" AE004454 ig_69272_68616_at "Intergenic region between PA0164 and PA0165, 68616-69272, (-) strand" GenBank 58616 "Intergenic region between PA0164 and PA0165, 68616-69272, (-) strand" AE004454 ig_721556_727608_s_at "Intergenic region between PA0701 and PA0702, 721556-727608, (+) strand" GenBank 711556 "Intergenic region between PA0701 and PA0702, 721556-727608, (+) strand" AE004506 ig_727608_721556_s_at "Intergenic region between PA0701 and PA0702, 721556-727608, (-) strand" GenBank 711556 "Intergenic region between PA0701 and PA0702, 721556-727608, (-) strand" AE004506 ig_773696_774416_at "Intergenic region between PA0714 and PA0715, 773696-774416, (+) strand" GenBank 763696 "Intergenic region between PA0714 and PA0715, 773696-774416, (+) strand" AE004507 ig_774416_773696_at "Intergenic region between PA0714 and PA0715, 773696-774416, (-) strand" GenBank 763696 "Intergenic region between PA0714 and PA0715, 773696-774416, (-) strand" AE004507 ig_785174_785969_at "Intergenic region between PA0716 and PA0717, 785174-785969, (+) strand" GenBank 775174 "Intergenic region between PA0716 and PA0717, 785174-785969, (+) strand" AE004507 ig_785969_785174_at "Intergenic region between PA0716 and PA0717, 785174-785969, (-) strand" GenBank 775174 "Intergenic region between PA0716 and PA0717, 785174-785969, (-) strand" AE004507 ig_788253_789144_at "Intergenic region between PA0788 and PA0789, 788253-789144, (+) strand" GenBank 778253 "Intergenic region between PA0788 and PA0789, 788253-789144, (+) strand" AE004514 ig_789144_788253_at "Intergenic region between PA0788 and PA0789, 788253-789144, (-) strand" GenBank 778253 "Intergenic region between PA0788 and PA0789, 788253-789144, (-) strand" AE004514 ig_863300_864095_at "Intergenic region between PA0806 and PA0807, 863300-864095, (+) strand" GenBank 853300 "Intergenic region between PA0806 and PA0807, 863300-864095, (+) strand" AE004516 ig_864095_863300_at "Intergenic region between PA0806 and PA0807, 863300-864095, (-) strand" GenBank 853300 "Intergenic region between PA0806 and PA0807, 863300-864095, (-) strand" AE004516 ig_884172_884799_at "Intergenic region between PA0826 and PA0827, 884172-884799, (+) strand" GenBank 874172 "Intergenic region between PA0826 and PA0827, 884172-884799, (+) strand" AE004517 ig_884799_884172_at "Intergenic region between PA0826 and PA0827, 884172-884799, (-) strand" GenBank 874172 "Intergenic region between PA0826 and PA0827, 884172-884799, (-) strand" AE004517 ig_901046_901934_at "Intergenic region between PA0905 and PA0906, 901046-901934, (+) strand" GenBank 891046 "Intergenic region between PA0905 and PA0906, 901046-901934, (+) strand" AE004525 ig_901934_901046_at "Intergenic region between PA0905 and PA0906, 901046-901934, (-) strand" GenBank 891046 "Intergenic region between PA0905 and PA0906, 901046-901934, (-) strand" AE004525 ig_991198_991830_at "Intergenic region between PA0961 and PA0962, 991198-991830, (+) strand" GenBank 981198 "Intergenic region between PA0961 and PA0962, 991198-991830, (+) strand" AE004530 ig_991830_991198_at "Intergenic region between PA0961 and PA0962, 991198-991830, (-) strand" GenBank 981198 "Intergenic region between PA0961 and PA0962, 991198-991830, (-) strand" AE004530 PA0001_dnaA_at chromosomal replication initiator protein DnaA PA0001 bac_dnaA Pseudomonas PA0001 "PA0001 /GENE=dnaA /DEF=chromosomal replication initiator protein DnaA /FUNCTION=DNA replication, recombination, modification and repair" 3677 // DNA binding // extended:inferred from electronic annotation; bac_dnaA; 1e-216 bac_dnaA // Bacterial dnaA protein;1e-216 d1in4a2 // c.37.1.13 // Holliday junction helicase RuvB;2.93e-16 118709; Chromosomal replication initiator protein dnaA;0.0 ; 15595199; (NC_002516) chromosomal replication initiator protein DnaA [Pseudomonas aeruginosa];0.0 AE004440 74% similar to DnaA protein [Escherichia coli] "DNA replication, recombination, modification and repair" 90160310; 90117642; 83116961 Class 2 PA0002_dnaN_at 2.7.7.7 "DNA polymerase III, beta chain" PA0002 DNA_pol3_beta_3 Pseudomonas PA0002 "PA0002 /GENE=dnaN /DEF=DNA polymerase III, beta chain /FUNCTION=DNA replication, recombination, modification and repair" 3677 // DNA binding // extended:inferred from electronic annotation; DNA_pol3_beta; 4.6e-63 "DNA_pol3_beta_2 // DNA polymerase III beta subunit, central domain;1.4e-58 /// DNA_pol3_beta // DNA polymerase III beta subunit, N-terminal domain;4.6e-63 /// DNA_pol3_beta_3 // DNA polymerase III beta subunit, C-terminal domain;1.8e-56" "d2pola1 // d.131.1.1 // DNA polymerase III, beta subunit;3.03e-32" "15595200; (NC_002516) DNA polymerase III, beta chain [Pseudomonas aeruginosa];0.0 ; 118802; DNA POLYMERASE III, BETA CHAIN;e-179" AE004440 92% similar to dnaN gene product of [P. putida]; 71% similar to DNA polymerase III beta-subunit [Escherichia coli] Purine metabolism; Pyrimidine metabolism "DNA replication, recombination, modification and repair" 92257585; 82060252 Class 2 PA0003_recF_at RecF protein PA0003 SMC_N Pseudomonas PA0003 "PA0003 /GENE=recF /DEF=RecF protein /FUNCTION=DNA replication, recombination, modification and repair" 5524 // ATP binding // extended:inferred from electronic annotation; SMC_N; 1.9e-124 SMC_N // RecF/RecN/SMC N terminal domain;1.9e-124 15595201; (NC_002516) RecF protein [Pseudomonas aeruginosa];0.0 ; 132249; DNA replication and repair protein recF;e-173 AE004440 90% similar to RecF protein [Pseudomonas putida]; 59% similar to RecF protein [Escherichia coli] "DNA replication, recombination, modification and repair" 89218947 Class 2 PA0004_gyrB_at 5.99.1.3 DNA gyrase subunit B PA0004 DNA_gyraseB_C Pseudomonas PA0004 "PA0004 /GENE=gyrB /DEF=DNA gyrase subunit B /FUNCTION=DNA replication, recombination, modification and repair" 5524 // ATP binding // extended:inferred from electronic annotation; HATPase_c; 3.6e-34 "Toprim // Toprim domain;3.2e-07 /// DNA_gyraseB // DNA gyrase B;1.4e-86 /// HATPase_c // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;3.6e-34 /// DNA_gyraseB_C // DNA gyrase B subunit, carboxyl terminus;6.3e-47" d1ei1a1 // d.14.1.3 // DNA gyrase B;1.33e-57 /// d1ei1a2 // d.122.1.2 // DNA gyrase B;1.25e-91 6116692; (AB005881) DNA gyrase subunit B [Pseudomonas aeruginosa];0.0 ; 15595202; (NC_002516) DNA gyrase subunit B [Pseudomonas aeruginosa];0.0 "EC:5.99.1.3 // TP2B_HUMAN DNA TOPOISOMERASE II, BETA ISOZYME (EC 5.99.1.3).;2.47e-271" AE004440 92% similar to DNA gyrase [Pseudomonas putida]; 82% similar to gyrB gene product [E. coli]. "DNA replication, recombination, modification and repair" 95314243; 89218947 Class 2 PA0005_at probable acyltransferase PA0005 Acyltransferase Pseudomonas PA0005 PA0005 /DEF=probable acyltransferase /FUNCTION=Fatty acid and phospholipid metabolism 8415 // acyltransferase activity // extended:Unknown; Acyltransferase; 1e-24 2.3.1.51 EC:2.3.1.51; PLCB_HUMAN 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE BETA (EC 2.3.1.51) (1- AGP ACYLTRANSFERASE 2) (1-AGPAT 2) (LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE-BETA) (LPAAT-BETA) (1-ACYLGLYCEROL-3-PHOSPHATE O- ACYLTRANSFERASE 2).;2.2e-47 Acyltransferase // Acyltransferase;1e-24 15595203; (NC_002516) probable acyltransferase [Pseudomonas aeruginosa];e-149 ; 11120074; (AF286536) putative N-acylhomoserine lactone synthase [Pseudomonas fluorescens];e-100 numtm:1;Nin-prob:0.97328;Type:SIGNAL;Span:TM from 12 to 34: Eval:0.62213 EC:2.3.1.51 // PLCB_HUMAN 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE BETA (EC 2.3.1.51) (1- AGP ACYLTRANSFERASE 2) (1-AGPAT 2) (LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE-BETA) (LPAAT-BETA) (1-ACYLGLYCEROL-3-PHOSPHATE O- ACYLTRANSFERASE 2).;1.29e-68 AE004440 56% similar to putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Rickettsia prowazekii]; 44% similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase [Mus musculus]. Fatty acid and phospholipid metabolism Class 3 PA0006_at conserved hypothetical protein PA0006 Hydrolase Pseudomonas PA0006 "PA0006 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3.1.3.18 EC:3.1.3.18; GPH_SYNP7 PHOSPHOGLYCOLATE PHOSPHATASE (EC 3.1.3.18) (PGP).;5.9e-09 d1j97a_ // c.108.1.4 // Phosphoserine phosphatase;4.6e-12 11120073; (AF286536) HisB-like protein [Pseudomonas fluorescens];1e-81 ; 15595204; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-100 EC:3.1.3.18 // GPH_SYNP7 PHOSPHOGLYCOLATE PHOSPHATASE (EC 3.1.3.18) (PGP).;5.09e-11 /// EC:5.4.2.6 // PGMB_LACLA BETA-PHOSPHOGLUCOMUTASE (EC 5.4.2.6) (BETA-PGM).;1.17e-14 /// EC:3.8.1.3 // DEH2_MORSP HALOACETATE DEHALOGENASE H-2 (EC 3.8.1.3).;6.2e-12 AE004440 56% similar to putative phosphatase YaeD [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0007_at hypothetical protein PA0007 Pseudomonas PA0007 "PA0007 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 15597273; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-47 ; 15595205; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004440 "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0008_glyS_at 6.1.1.14 glycyl-tRNA synthetase beta chain PA0008 tRNA_synt_2f Pseudomonas PA0008 "PA0008 /GENE=glyS /DEF=glycyl-tRNA synthetase beta chain /FUNCTION=Amino acid biosynthesis and metabolism; Translation, post-translational modification, degradation" 4820 // glycine-tRNA ligase activity // extended:Unknown; tRNA_synt_2f; 1.9e-241 tRNA_synt_2f // Glycyl-tRNA synthetase beta subunit;1.9e-241 15602967; (NC_002663) GlyS [Pasteurella multocida];0.0 ; 15595206; (NC_002516) glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa];0.0 AE004440 64% similar to glycyl-tRNA synthetase beta subunit [Escherichia coli] "Aminoacyl-tRNA biosynthesis; Glycine, serine and threonine metabolism" "Amino acid biosynthesis and metabolism; Translation, post-translational modification, degradation" 83030764 Class 2 PA0009_glyQ_at 6.1.1.14 glycyl-tRNA synthetase alpha chain PA0009 tRNA_synt_2e Pseudomonas PA0009 "PA0009 /GENE=glyQ /DEF=glycyl-tRNA synthetase alpha chain /FUNCTION=Amino acid biosynthesis and metabolism; Translation, post-translational modification, degradation" 4820 // glycine-tRNA ligase activity // extended:Unknown; tRNA_synt_2e; 1.2e-246 tRNA_synt_2e // Glycyl-tRNA synthetase alpha subunit;1.2e-246 d1j5wa_ // d.104.1.1 // Glycyl-tRNA synthetase (GlyRS) alpha chain;5.23e-147 2500992; Glycyl-tRNA synthetase alpha chain (Glycine--tRNA ligase alpha chain) (GlyRS);e-152 ; 15595207; (NC_002516) glycyl-tRNA synthetase alpha chain [Pseudomonas aeruginosa];0.0 AE004440 "86% similar to glycine-tRNA synthetase, alpha subunit [Escherichia coli]" "Aminoacyl-tRNA biosynthesis; Glycine, serine and threonine metabolism" "Amino acid biosynthesis and metabolism; Translation, post-translational modification, degradation" 83030764 Class 2 PA0010_tag_at 3.2.2.20 DNA-3-methyladenine glycosidase I PA0010 Adenine_glyco Pseudomonas PA0010 "PA0010 /GENE=tag /DEF=DNA-3-methyladenine glycosidase I /FUNCTION=DNA replication, recombination, modification and repair" 8725 // DNA 3-methyladenine glycosylase I activity // extended:inferred from electronic annotation; Adenine_glyco; 1e-118 Adenine_glyco // Methyladenine glycosylase;1e-118 d1lmza_ // a.96.1.4 // 3-Methyladenine DNA glycosylase I (Tag);9.93e-75 15595208; (NC_002516) DNA-3-methyladenine glycosidase I [Pseudomonas aeruginosa];e-107 ; 2330642; (Y14568) tag [Pseudomonas fluorescens];3e-89 AE004441 88% similar to tag gene product [Pseudomonas fluorescens]; 66% similar to 3-methyladenine-DNA glycosylase I (tag) [E. coli] "DNA replication, recombination, modification and repair" 86232617; 97096907 Class 2 PA0011_at 2.3.1.- probable 2-OH-lauroyltransferase PA0011 Lip_A_acyltrans Pseudomonas PA0011 PA0011 /DEF=probable 2-OH-lauroyltransferase /FUNCTION=Cell wall / LPS / capsule 8415 // acyltransferase activity // extended:Unknown; Lip_A_acyltrans; 2e-30 Lip_A_acyltrans // Bacterial lipid A biosynthesis acyltransferase;2e-30 15595209; (NC_002516) probable 2-OH-lauroyltransferase [Pseudomonas aeruginosa];e-172 ; 2330641; (Y14568) htrB [Pseudomonas fluorescens];e-114 AE004441 88% similar to htrB gene product [Pseudomonas fluorescens]; 45% similar to HtrB protein [Escherichia coli] Lipopolysaccharide biosynthesis Cell wall / LPS / capsule 95050264; 90368739 Class 3 PA0012_at hypothetical protein PA0012 Pseudomonas PA0012 "PA0012 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595210; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-45 AE004441 "Hypothetical, unclassified, unknown" Class 4 PA0013_at conserved hypothetical protein PA0013 DUF165 Pseudomonas PA0013 PA0013 /DEF=conserved hypothetical protein /FUNCTION=Membrane proteins "DUF165 // Uncharacterized ACR, YhhQ family COG1738;2e-70" "15803983; (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7 EDL933];5e-71 ; 15595211; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-122" numtm:6;Nin-prob:0.96192;Type: ;Span:TM from 13 to 35: Eval:0.32786/TM from 45 to 64: Eval:0.39894/TM from 71 to 90: Eval:0.82101/TM from 100 to 122: Eval:0.84812/TM from 142 to 164: Eval:0.78701/TM from 184 to 206: Eval:0.81068 AE004441 77% similar to hypothetical protein YhhQ [Escherichia coli]. Membrane proteins Class 4 PA0014_at hypothetical protein PA0014 Pseudomonas PA0014 "PA0014 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595212; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];5e-44 AE004441 "Hypothetical, unclassified, unknown" Class 4 PA0015_at hypothetical protein PA0015 TPR Pseudomonas PA0015 "PA0015 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" TPR // TPR Domain;2.9e-06 d1elwa_ // a.118.8.1 // Hop;2.84e-09 15890251; (NC_003063) AGR_L_275p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];3e-18 ; 15595213; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-55 EC:1.14.11.16 // ASPH_HUMAN ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE (EC 1.14.11.16) (ASPARTATE BETA- HYDROXYLASE) (ASP BETA-HYDROXYLASE) (PEPTIDE-ASPARTATE BETA- DIOXYGENASE).;4.42e-11 AE004441 46% similar to putative protein [Aquifex aeolicus]. "Hypothetical, unclassified, unknown" Class 4 PA0016_trkA_at potassium uptake protein TrkA PA0016 TrkA-C Pseudomonas PA0016 PA0016 /GENE=trkA /DEF=potassium uptake protein TrkA /FUNCTION=Transport of small molecules 6813 // potassium ion transport // extended:inferred from electronic annotation; TrkA-N; 1.6e-16 TrkA-N // TrkA-N domain;1.8e-32 /// TrkA-C // TrkA-C domain;1.9e-38 d1lssa_ // c.2.1.9 // Ktn Mja218;3.05e-30 731009; Trk system potassium uptake protein trkA (K(+)-uptake protein trkA);e-172 ; 15595214; (NC_002516) potassium uptake protein TrkA [Pseudomonas aeruginosa];0.0 EC:1.5.1.28 // ODH_ARTSP OPINE DEHYDROGENASE (EC 1.5.1.28) (N-(1-D-CARBOXYETHYL)-L-NORVALINE DEHYDROGENASE).;5.47e-10 AE004441 79% similar to TrkA [Vibrio alginolyticus]; 79% similar to TrkA protein of the constitutive K+ -transport system Trk [Escherichia coli] Transport of small molecules Class 2 PA0017_at conserved hypothetical protein PA0017 Nol1_Nop2_Sun Pseudomonas PA0017 "PA0017 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3723 // RNA binding // extended:inferred from direct assay; NusB; 6.5e-32 2.1.1.17 EC:2.1.1.17; PMTA_RHOSH PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE (EC 2.1.1.17).;1.2e-10 Nol1_Nop2_Sun // NOL1/NOP2/sun family;2.5e-89 /// NusB // NusB family;6.5e-32 d1dl5a1 // c.66.1.7 // Protein-L-isoaspartyl O-methyltransferase;1.21e-21 /// d1ey1a_ // a.79.1.1 // Antitermination factor NusB;5.13e-17 15595215; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15640076; (NC_002505) sun protein [Vibrio cholerae];e-114 "EC:2.1.1.132 // COBL_PSEDE PRECORRIN-6Y C5,15-METHYLTRANSFERASE [DECARBOXYLATING] (EC 2.1.1.132) (PRECORRIN-6 METHYLTRANSFERASE) (PRECORRIN-6Y METHYLASE).;9.33e-13" AE004441 63% similar to hypothetical protein Sun [Escherichia coli]. "Hypothetical, unclassified, unknown" 94018648; 98386520 Class 4 PA0018_fmt_at 2.1.2.9 methionyl-tRNA formyltransferase PA0018 formyl_trans_C Pseudomonas PA0018 "PA0018 /GENE=fmt /DEF=methionyl-tRNA formyltransferase /FUNCTION=Amino acid biosynthesis and metabolism; Translation, post-translational modification, degradation" "16742 // hydroxymethyl-, formyl- and related transferase activity // extended:Unknown; formyl_transf; 2.6e-64" 2.1.2.9 "EC:2.1.2.9; FMT_YEAST PROBABLE METHIONYL-TRNA FORMYLTRANSFERASE, MITOCHONDRIAL PRECURSOR (EC 2.1.2.9).;5.5e-103 ; EC:3.5.1.10; PURU_SYNY3 FORMYLTETRAHYDROFOLATE DEFORMYLASE (EC 3.5.1.10) (FORMYL-FH(4) HYDROLASE).;7.7e-61" "formyl_transf // Formyl transferase;2.6e-64 /// formyl_trans_C // Formyl transferase, C-terminal domain;1.3e-44" "d1fmta2 // c.65.1.1 // Methionyl-tRNAfmet formyltransferase;3.6e-67 /// d1fmta1 // b.46.1.1 // Methionyl-tRNAfmet formyltransferase, C-terminal domain;3.25e-31" 15595216; (NC_002516) methionyl-tRNA formyltransferase [Pseudomonas aeruginosa];e-177 ; 15803815; (NC_002655) 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase [Escherichia coli O157:H7 EDL933];e-102 "EC:3.5.1.10 // PURU_SYNY3 FORMYLTETRAHYDROFOLATE DEFORMYLASE (EC 3.5.1.10) (FORMYL-FH(4) HYDROLASE).;1.35e-64 /// EC:2.1.2.9 // FMT_YEAST PROBABLE METHIONYL-TRNA FORMYLTRANSFERASE, MITOCHONDRIAL PRECURSOR (EC 2.1.2.9).;1.08e-111" AE004441 74% similar to methionyl-tRNA formyltransferase [Escherichia coli] Aminoacyl-tRNA biosynthesis; Methionine metabolism; One carbon pool by folate "Amino acid biosynthesis and metabolism; Translation, post-translational modification, degradation" 97042366; 93163064 Class 2 PA0019_def_at polypeptide deformylase PA0019 Pep_deformylase Pseudomonas PA0019 "PA0019 /GENE=def /DEF=polypeptide deformylase /FUNCTION=Translation, post-translational modification, degradation" 8463 // formylmethionine deformylase activity // extended:Unknown; Pep_deformylase; 3e-72 /// 8463 // formylmethionine deformylase activity // extended:Unknown; 3.5.1.31; 1.28e-58 3.5.1.31 EC:3.5.1.31; DEF_TREPA POLYPEPTIDE DEFORMYLASE (EC 3.5.1.31) (PDF) (FORMYLMETHIONINE DEFORMYLASE).;1.5e-52 Pep_deformylase // Polypeptide deformylase;3e-72 d1lrya_ // d.167.1.1 // Peptide deformylase;9.25e-61 15595217; (NC_002516) polypeptide deformylase [Pseudomonas aeruginosa];6e-94 ; 15837528; (NC_002488) polypeptide deformylase [Xylella fastidiosa 9a5c];3e-52 EC:3.5.1.31 // DEF_TREPA POLYPEPTIDE DEFORMYLASE (EC 3.5.1.31) (PDF) (FORMYLMETHIONINE DEFORMYLASE).;1.28e-58 AE004441 75% similar to E. coli polypeptide deformylase. "Translation, post-translational modification, degradation" Class 2 PA0020_at hypothetical protein PA0020 LysM Pseudomonas PA0020 "PA0020 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16998 // cell wall catabolism // extended:Unknown; LysM; 6.6e-11 LysM // LysM domain;6.6e-11 15676037; (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58];7e-45 ; 15595218; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004441 "Hypothetical, unclassified, unknown" Class 4 PA0021_at conserved hypothetical protein PA0021 SMF Pseudomonas PA0021 "PA0021 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 9294 // DNA mediated transformation // extended:Unknown; SMF; 2.3e-92 SMF // SMF family;2.3e-92 15595219; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15640080; (NC_002505) smf protein [Vibrio cholerae];1e-65 AE004441 59% similar to Smf protein [Escherichia coli]. "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0022_at conserved hypothetical protein PA0022 Sua5_yciO_yrdC Pseudomonas PA0022 "PA0022 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" Sua5_yciO_yrdC // yrdC domain;4.9e-54 d1hrua_ // d.115.1.1 // Hypothetical protein YrdC;1.28e-55 "15595220; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-107 ; 13096287; Chain A, The Structure Of The Yrdc Gene Product From E.Coli;1e-39" AE004441 63% similar to E. coli yrdC hypothetical gene product. "Hypothetical, unclassified, unknown" Class 4 PA0023_qor_at 1.6.5.5 quinone oxidoreductase PA0023 adh_zinc Pseudomonas PA0023 PA0023 /GENE=qor /DEF=quinone oxidoreductase /FUNCTION=Energy metabolism "4024 // alcohol dehydrogenase activity, zinc-dependent // extended:Unknown; ADH_zinc_N; 3.6e-95" 1.2.1.46 EC:1.2.1.46; FADH_PSEPU GLUTATHIONE-INDEPENDENT FORMALDEHYDE DEHYDROGENASE (EC 1.2.1.46) (FDH) (FALDH).;9.3e-70 ; EC:1.1.1.14; DHSO_HUMAN SORBITOL DEHYDROGENASE (EC 1.1.1.14) (L-IDITOL 2-DEHYDROGENASE).;4.1e-72 ; EC:1.6.5.5; QOR_HUMAN QUINONE OXIDOREDUCTASE (EC 1.6.5.5) (NADPH:QUINONE REDUCTASE) (ZETA- CRYSTALLIN).;2e-80 ADH_zinc_N // Zinc-binding dehydrogenase;3.6e-95 d1qora1 // b.35.1.2 // Quinone oxidoreductase;8.65e-57 /// d1qora2 // c.2.1.1 // Quinone oxidoreductase;8.98e-34 1073008; quinone oxidoreductase (EC 1.6.5.5) - Pseudomonas aeruginosa;0.0 ; 15595221; (NC_002516) quinone oxidoreductase [Pseudomonas aeruginosa];0.0 EC:1.6.5.5 // QOR_HUMAN QUINONE OXIDOREDUCTASE (EC 1.6.5.5) (NADPH:QUINONE REDUCTASE) (ZETA- CRYSTALLIN).;2.55e-90 /// EC:1.2.1.1 // ADHX_HUMAN ALCOHOL DEHYDROGENASE CLASS III CHI CHAIN (EC 1.1.1.1) (GLUTATHIONE- DEPENDENT FORMALDEHYDE DEHYDROGENASE) (EC 1.2.1.1) (FDH).;1.39e-84 /// EC:1.1.1.14 // DHSO_HUMAN SORBITOL DEHYDROGENASE (EC 1.1.1.14) (L-IDITOL 2-DEHYDROGENASE).;1.95e-83 AE004441 72% similar to quinone oxidoreductase [E. coli]. Energy metabolism Class 2 PA0024_hemF_at 1.3.3.3 "coproporphyrinogen III oxidase, aerobic" PA0024 Coprogen_oxidas Pseudomonas PA0024 "PA0024 /GENE=hemF /DEF=coproporphyrinogen III oxidase, aerobic /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 4109 // coproporphyrinogen oxidase activity // extended:inferred from electronic annotation; Coprogen_oxidas; 1.4e-244 /// 4109 // coproporphyrinogen oxidase activity // extended:inferred from electronic annotation; 1.3.3.3; 6.56e-146 1.3.3.3 "EC:1.3.3.3; HEM6_HUMAN COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL PRECURSOR (EC 1.3.3.3) (COPROPORPHYRINOGENASE) (COPROGEN OXIDASE) (COX).;6e-148" Coprogen_oxidas // Coproporphyrinogen III oxidase;1.4e-244 "16130361; (NC_000913) coproporphyrinogen III oxidase [Escherichia coli K12];e-127 ; 15595222; (NC_002516) coproporphyrinogen III oxidase, aerobic [Pseudomonas aeruginosa];0.0" "EC:1.3.3.3 // HEM6_HUMAN COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL PRECURSOR (EC 1.3.3.3) (COPROPORPHYRINOGENASE) (COPROGEN OXIDASE) (COX).;6.56e-146" AE004442 80% similar to S. typhimurium hemF gene product. Porphyrin and chlorophyll metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" Class 2 PA0025_aroE_at 1.1.1.25 shikimate dehydrogenase PA0025 Shikimate_DH Pseudomonas PA0025 PA0025 /GENE=aroE /DEF=shikimate dehydrogenase /FUNCTION=Amino acid biosynthesis and metabolism 4764 // shikimate 5-dehydrogenase activity // extended:inferred from mutant phenotype; 1.1.1.25; 4.01e-86 /// 4764 // shikimate 5-dehydrogenase activity // extended:inferred from mutant phenotype; Shikimate_DH; 8e-114 1.1.1.25 EC:1.1.1.25; AROE_PSEAE SHIKIMATE 5-DEHYDROGENASE (EC 1.1.1.25).;4.1e-85 Shikimate_DH // Shikimate / quinate 5-dehydrogenase;8e-114 d1gpja2 // c.2.1.10 // Glutamyl tRNA-reductase middle domain;3.48e-32 747873; (X85015) shikimate 5-dehydrogenase [Pseudomonas aeruginosa];e-155 ; 15595223; (NC_002516) shikimate dehydrogenase [Pseudomonas aeruginosa];e-156 "EC:1.5.1.10 // LYS9_YEAST SACCHAROPINE DEHYDROGENASE [NADP+, L-GLUTAMATE FORMING] (EC 1.5.1.10).;7.8e-19 /// EC:1.1.1.25 // AROE_PSEAE SHIKIMATE 5-DEHYDROGENASE (EC 1.1.1.25).;4.01e-86" AE004442 64% similar to E. coli shikimate dehydrogenase. "Phenylalanine, tyrosine and tryptophan biosynthesis" Amino acid biosynthesis and metabolism Class 2 PA0026_at hypothetical protein PA0026 Pseudomonas PA0026 "PA0026 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595224; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004442 "Hypothetical, unclassified, unknown" Class 4 PA0027_at hypothetical protein PA0027 Pseudomonas PA0027 "PA0027 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1eq3a_ // d.26.1.1 // Parvulin;2.87e-09 15613740; (NC_002570) protein secretion (post-translocation chaperonin) [Bacillus halodurans];4e-07 ; 15595225; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004442 "Hypothetical, unclassified, unknown" Class 4 PA0028_at hypothetical protein PA0028 Pseudomonas PA0028 "PA0028 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595226; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-109 numtm:1;Nin-prob:0.77507;Type:SIGNAL;Span:TM from 5 to 27: Eval:0.56929 AE004442 "Hypothetical, unclassified, unknown" Class 4 PA0029_at probable sulfate transporter PA0029 Sulfate_transp Pseudomonas PA0029 PA0029 /DEF=probable sulfate transporter /FUNCTION=Membrane proteins; Transport of small molecules 8271 // sulfate porter activity // extended:inferred from electronic annotation; Sulfate_transp; 3.7e-54 Sulfate_transp // Sulfate transporter family;3.7e-54 /// STAS // STAS domain;0.00033 d1auz__ // c.13.2.1 // Anti-sigma factor antagonist SpoIIaa;7.54e-10 15595227; (NC_002516) probable sulfate transporter [Pseudomonas aeruginosa];0.0 numtm:10;Nin-prob:0.31263;Type: ;Span:TM from 44 to 66: Eval:0.56432/TM from 71 to 93: Eval:0.66802/TM from 103 to 125: Eval:0.33160/TM from 132 to 154: Eval:0.46645/TM from 174 to 196: Eval:0.83436/TM from 203 to 225: Eval:0.86008/TM from 250 to 272: Eval:0.87848/TM from 325 to 342: Eval:0.86819/TM from 349 to 366: Eval:0.86150/TM from 391 to 413: Eval:0.51549 AE004442 48% similar to putative high affinity sulfate transporter [Aquifex aeolicus]. Membrane proteins; Transport of small molecules Class 3 PA0030_at hypothetical protein PA0030 OpuAC Pseudomonas PA0030 "PA0030 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Transport of small molecules" OpuAC // Substrate binding domain of ABC-type glycine betaine transport system;1.7e-98 15595228; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15890343; (NC_003063) AGR_L_470p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];2e-84 AE004442 "Hypothetical, unclassified, unknown; Transport of small molecules" Class 4 PA0031_betC_at choline sulfatase PA0031 Sulfatase Pseudomonas PA0031 "PA0031 /GENE=betC /DEF=choline sulfatase /FUNCTION=Adaptation, protection" 8484 // sulfuric ester hydrolase activity // extended:inferred from electronic annotation; Sulfatase; 2.2e-37 3.1.6.6 EC:3.1.6.6; BETC_RHIME CHOLINE-SULFATASE (EC 3.1.6.6).;6e-106 Sulfatase // Sulfatase;2.2e-37 d1auk__ // c.76.1.2 // Arylsulfatase A;1.47e-119 15890342; (NC_003063) AGR_L_469p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];e-131 ; 15595229; (NC_002516) choline sulfatase [Pseudomonas aeruginosa];0.0 EC:3.6.1.9 // PC1_HUMAN PLASMA-CELL MEMBRANE GLYCOPROTEIN PC-1 [INCLUDES: ALKALINE PHOSPHODIESTERASE I (EC 3.1.4.1) NUCLEOTIDE PYROPHOSPHATASE (EC 3.6.1.9) (NPPASE)].;5.27e-09 /// EC:2.7.8.20 // MDOB_ECOLI PHOSPHOGLYCEROL TRANSFERASE I (EC 2.7.8.20) (PHOSPHATIDYLGLYCEROL-- MEMBRANE-OLIGOSACCHARIDE GLYCEROPHOSPHOTRANSFERASE).;1.66e-37 /// EC:3.1.6.6 // BETC_RHIME CHOLINE-SULFATASE (EC 3.1.6.6).;4.22e-143 AE004442 62% similar to choline sulfatase [Sinorhizobium meliloti]. "Adaptation, protection" Class 2 PA0032_at probable transcriptional regulator PA0032 LysR_substrate Pseudomonas PA0032 PA0032 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 1.7e-29 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;1.7e-29 /// LysR_substrate // LysR substrate binding domain;4.2e-39" 15595230; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-175 ; 15890344; (NC_003063) AGR_L_471p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];2e-48 AE004442 49% similar to glycine cleavage system transcriptional activator protein GcvA [Escherichia coli]. Transcriptional regulators Class 3 PA0033_at hypothetical protein PA0033 Pseudomonas PA0033 "PA0033 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595231; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-63 ; 15599141; (NC_002516) probable two-component sensor [Pseudomonas aeruginosa];6e-08 AE004443 "Hypothetical, unclassified, unknown" Class 4 PA0034_at probable two-component response regulator PA0034 response_reg Pseudomonas PA0034 PA0034 /DEF=probable two-component response regulator /FUNCTION=Transcriptional regulators; Two-component regulatory systems 156 // two-component response regulator activity // extended:inferred from electronic annotation; response_reg; 3e-45 "response_reg // Response regulator receiver domain;3e-45 /// GerE // Bacterial regulatory proteins, luxR family;1.2e-28" d1nat__ // c.23.1.1 // Sporulation response regulator Spo0F;7.41e-28 /// d1fsea_ // a.4.6.2 // Germination protein GerE;7.05e-17 115157; Virulence factors putative positive transcription regulator bvgA;2e-60 ; 15595232; (NC_002516) probable two-component response regulator [Pseudomonas aeruginosa];e-110 EC:3.1.1.61 // Y415_BORBU PROBABLE PROTEIN-GLUTAMATE METHYLESTERASE BB0415 (EC 3.1.1.61).;1.42e-42 AE004443 86% similar to PUTATIVE TRANSCRIPTIONAL REGULATOR TrpO [Pseudomonas aeruginosa] 75% similar to BvgA positive transcription regulator; putative [Bordetella pertussis] Two-component System Transcriptional regulators; Two-component regulatory systems 92167813 Class 3 PA0035_trpA_at 4.2.1.20 tryptophan synthase alpha chain PA0035 trp_syntA Pseudomonas PA0035 PA0035 /GENE=trpA /DEF=tryptophan synthase alpha chain /FUNCTION=Amino acid biosynthesis and metabolism 4834 // tryptophan synthase activity // extended:Unknown; trp_syntA; 5.2e-150 4.2.1.20 EC:4.2.1.20; TRP_YEAST TRYPTOPHAN SYNTHASE (EC 4.2.1.20).;1.8e-87 trp_syntA // Tryptophan synthase alpha chain;5.2e-150 d1geqa_ // c.1.2.4 // Trp synthase alpha-subunit;8.03e-81 151617; (M15826) tryptophan synthase alpha subunit [Pseudomonas aeruginosa];e-148 ; 15595233; (NC_002516) tryptophan synthase alpha chain [Pseudomonas aeruginosa];e-149 EC:4.2.1.20 // TRP_YEAST TRYPTOPHAN SYNTHASE (EC 4.2.1.20).;7.36e-87 AE004443 "Phenylalanine, tyrosine and tryptophan biosynthesis" Amino acid biosynthesis and metabolism 88174343 Class 1 PA0036_trpB_at 4.2.1.20 tryptophan synthase beta chain PA0036 PALP Pseudomonas PA0036 PA0036 /GENE=trpB /DEF=tryptophan synthase beta chain /FUNCTION=Amino acid biosynthesis and metabolism 16829 // lyase activity // extended:Unknown; PALP; 3.8e-127 4.2.99.8 EC:4.2.99.8; Y4XP_RHISN PUTATIVE CYSTEINE SYNTHASE (EC 4.2.99.8) (O-ACETYLSERINE SULFHYDRYLASE) (O-ACETYLSERINE (THIOL)-LYASE) (CSASE).;4.6e-90 ; EC:4.1.99.4; 1A1D_THEMA PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (EC 4.1.99.4) (ACC DEAMINASE).;2.2e-97 ; EC:4.2.1.20; TRP_YEAST TRYPTOPHAN SYNTHASE (EC 4.2.1.20).;5.7e-156 PALP // Pyridoxal-phosphate dependent enzyme;3.8e-127 "d1qopb_ // c.79.1.1 // Tryptophan synthase, beta-subunit;3.75e-157" 151616; (M15826) tryptophan synthase beta subunit [Pseudomonas aeruginosa];0.0 ; 15595234; (NC_002516) tryptophan synthase beta chain [Pseudomonas aeruginosa];0.0 EC:4.2.99.8 // Y4XP_RHISN PUTATIVE CYSTEINE SYNTHASE (EC 4.2.99.8) (O-ACETYLSERINE SULFHYDRYLASE) (O-ACETYLSERINE (THIOL)-LYASE) (CSASE).;6.57e-69 /// EC:4.1.99.4 // 1A1D_THEMA PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (EC 4.1.99.4) (ACC DEAMINASE).;3.63e-89 /// EC:4.2.1.20 // TRP_YEAST TRYPTOPHAN SYNTHASE (EC 4.2.1.20).;7.22e-154 AE004443 "Phenylalanine, tyrosine and tryptophan biosynthesis" Amino acid biosynthesis and metabolism 88174343 Class 1 PA0037_trpI_at transcriptional regulator TrpI PA0037 HTH_1 Pseudomonas PA0037 PA0037 /GENE=trpI /DEF=transcriptional regulator TrpI /FUNCTION=Amino acid biosynthesis and metabolism; Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 4.1e-25 "LysR_substrate // LysR substrate binding domain;6.6e-17 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;4.1e-25" 94826; regulatory protein trpI - Pseudomonas aeruginosa;e-165 ; 15595235; (NC_002516) transcriptional regulator TrpI [Pseudomonas aeruginosa];e-170 AE004443 97% similarity to TrpI protein [Pseudomonas aeruginosa] Amino acid biosynthesis and metabolism; Transcriptional regulators Class 1 PA0038_at hypothetical protein PA0038 Pseudomonas PA0038 "PA0038 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595236; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-35 ; 16263816; (NC_003078) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti];1e-16 AE004443 "Hypothetical, unclassified, unknown" Class 4 PA0039_at hypothetical protein PA0039 Pseudomonas PA0039 "PA0039 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595237; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-36 ; 1196763; (M21093) unknown protein [Pseudomonas aeruginosa];5e-20 AE004443 57% similar to hypothetical protein YnfD [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0040_s_at conserved hypothetical protein PA0040 HlyB Pseudomonas PA0040 "PA0040 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" HlyB // Hemolysin activator HlyB;1.3e-19 15597659; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15595238; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 AE004443 48% similar to hemolysin activator protein HpmB precursor [Proteus mirabilis]. "Hypothetical, unclassified, unknown" Class 4 PA0041_at probable hemagglutinin PA0041 Pseudomonas PA0041 "PA0041 /DEF=probable hemagglutinin /FUNCTION=Secreted Factors (toxins, enzymes, alginate)" DUF637 // Possible hemagglutinin (DUF637);1.3e-99 /// Fil_haemagg // Haemagluttinin repeat;3.9e-188 /// Haemagg_act // haemagglutination activity domain;4.7e-59 15595239; (NC_002516) probable hemagglutinin [Pseudomonas aeruginosa];0.0 ; 15597658; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:1;Nin-prob:0.97429;Type:SIGNAL;Span:TM from 11 to 33: Eval:0.53054 AE004443 43% similar to regions of filamentous hemagglutinin [Bordetella pertussis]. "Secreted factors (toxins, enzymes, alginate)" Class 3 PA0042_at hypothetical protein PA0042 Pseudomonas PA0042 "PA0042 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595240; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-73 AE004444 "Hypothetical, unclassified, unknown" Class 4 PA0043_at hypothetical protein PA0043 Pseudomonas PA0043 "PA0043 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 15595241; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 13475501; (NC_002678) hypothetical protein [Mesorhizobium loti];2e-58 numtm:13;Nin-prob:0.91682;Type: ;Span:TM from 44 to 66: Eval:0.77857/TM from 81 to 100: Eval:0.86829/TM from 107 to 125: Eval:0.88397/TM from 140 to 171: Eval:0.77647/TM from 184 to 206: Eval:0.89536/TM from 221 to 243: Eval:0.54639/TM from 248 to 270: Eval:0.48305/TM from 275 to 297: Eval:0.97147/TM from 310 to 332: Eval:0.59647/TM from 352 to 371: Eval:0.86754/TM from 378 to 400: Eval:0.76643/TM from 415 to 434: Eval:0.60453/TM from 439 to 458: Eval:0.91654 AE004444 58% similar to hypothetical protein [Methanobacterium thermoautotrophicum]. "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0044_exoT_at 2.4.2.- exoenzyme T PA0044 Yers_vir_YopE Pseudomonas PA0044 "PA0044 /GENE=exoT /DEF=exoenzyme T /FUNCTION=Secreted Factors (toxins, enzymes, alginate)" 5096 // GTPase activator activity // extended:inferred from direct assay; Yers_vir_YopE; 9e-44 2.4.2.31 EC:2.4.2.31; NARG_HUMAN GPI-LINKED NAD(P)(+)--ARGININE ADP-RIBOSYLTRANSFERASE PRECURSOR (EC 2.4.2.31) (MONO(ADP-RIBOSYL)TRANSFERASE).;8.7e-36 Yers_vir_YopE // Yersinia virulence determinant (YopE);9e-44 d1he1a_ // a.24.11.1 // ExoS toxin;1.24e-50 2120612; ADP-ribosyltransferase (EC 2.4.2.-) - Pseudomonas aeruginosa;0.0 ; 15595242; (NC_002516) exoenzyme T [Pseudomonas aeruginosa];0.0 AE004444 99% similar to ADP-ribosyltransferase (exoenzyme 53) [Pseudomonas aeruginosa] Type III Secretion "Secreted factors (toxins, enzymes, alginate)" 96200112 Class 1 PA0045_at hypothetical protein PA0045 CsgG Pseudomonas PA0045 "PA0045 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" CsgG // Curli production assembly/transport component CsgG;2.8e-100 15595243; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-125 ; 15677003; (NC_003112) hypothetical protein [Neisseria meningitidis MC58];4e-88 AE004444 "Hypothetical, unclassified, unknown" Class 4 PA0046_at hypothetical protein PA0046 Pseudomonas PA0046 "PA0046 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15677002; (NC_003112) hypothetical protein [Neisseria meningitidis MC58];2e-13 ; 15595244; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-63 AE004444 "Hypothetical, unclassified, unknown" Class 4 PA0047_at hypothetical protein PA0047 Pseudomonas PA0047 "PA0047 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF799 // Putative bacterial lipoprotein (DUF799);1.5e-28 15595245; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-90 ; 7228969; (AF226570) putative lipoprotein GNA1162 [Neisseria meningitidis];1e-39 AE004444 "Hypothetical, unclassified, unknown" Class 4 PA0048_at probable transcriptional regulator PA0048 HTH_3 Pseudomonas PA0048 PA0048 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3677 // DNA binding // extended:inferred from electronic annotation; HTH_3; 8.8e-12 HTH_3 // Helix-turn-helix;8.8e-12 "d1b0na2 // a.35.1.3 // SinR repressor, DNA-binding domain;7.38e-11" 15595246; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];2e-66 AE004444 55% similar to a region of TrbA [Plasmid RK2] [Escherichia coli]. Transcriptional regulators Class 3 PA0049_at hypothetical protein PA0049 Pseudomonas PA0049 "PA0049 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595247; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 6562795; (AL133423) hypothetical protein SC4A7.22 [Streptomyces coelicolor];1e-54 numtm:1;Nin-prob:0.94705;Type:SIGNAL;Span:TM from 7 to 29: Eval:0.87350 AE004444 "Hypothetical, unclassified, unknown" Class 4 PA0050_r_at hypothetical protein PA0050 Pseudomonas PA0050 "PA0050 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595248; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];8e-22 AE004445 "Hypothetical, unclassified, unknown" Class 4 PA0051_at probable glutamine amidotransferase PA0051 GATase_2 Pseudomonas PA0051 PA0051 /DEF=probable glutamine amidotransferase /FUNCTION=Putative enzymes 8152 // metabolism // extended:inferred from electronic annotation; GATase_2; 7.4e-08 6.3.5.4 EC:6.3.5.4; ASNS_HUMAN ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] (EC 6.3.5.4) (GLUTAMINE- DEPENDENT ASPARAGINE SYNTHETASE) (TS11 CELL CYCLE CONTROL PROTEIN).;2.9e-131 ; EC:2.4.2.14; PUR1_HUMAN AMIDOPHOSPHORIBOSYLTRANSFERASE PRECURSOR (EC 2.4.2.14) (GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE) (ATASE) (GPAT).;5.3e-49 ; EC:2.6.1.16; GFA2_HUMAN GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2 (EC 2.6.1.16) (HEXOSEPHOSPHATE AMINOTRANSFERASE 2) (D-FRUCTOSE-6- PHOSPHATE AMIDOTRANSFERASE 2) (GFAT 2) (GFAT2).;1.1e-84 GATase_2 // Glutamine amidotransferases class-II;7.4e-08 /// Asn_synthase // Asparagine synthase;7.2e-14 "d1ct9a1 // c.26.2.1 // Asparagine synthetase B, C-terminal domain;3.8e-72 /// d1ct9a2 // d.153.1.1 // Asparagine synthetase B, N-terminal domain;4.48e-58" 6572985; (AF195615) PhzH [Pseudomonas chlororaphis];0.0 ; 15595249; (NC_002516) probable glutamine amidotransferase [Pseudomonas aeruginosa];0.0 EC:6.3.5.4 // ASNS_HUMAN ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] (EC 6.3.5.4) (GLUTAMINE- DEPENDENT ASPARAGINE SYNTHETASE) (TS11 CELL CYCLE CONTROL PROTEIN).;3.9e-151 /// EC:2.4.2.14 // PUR1_HUMAN AMIDOPHOSPHORIBOSYLTRANSFERASE PRECURSOR (EC 2.4.2.14) (GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE) (ATASE) (GPAT).;4.21e-74 AE004445 59% similar to putative asparagine synthetase YucB [Bacillus subtilis]. Putative enzymes Class 3 PA0052_at hypothetical protein PA0052 Pseudomonas PA0052 "PA0052 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16330587; (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803];8e-10 ; 15595250; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-79 AE004445 55% similar to hypothetical protein [Synechocystis sp.]. "Hypothetical, unclassified, unknown" Class 4 PA0053_at hypothetical protein PA0053 Pseudomonas PA0053 "PA0053 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595251; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-44 AE004445 "Hypothetical, unclassified, unknown" Class 4 PA0054_at conserved hypothetical protein PA0054 DUF60 Pseudomonas PA0054 "PA0054 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "16772 // transferase activity, transferring phosphorus-containing groups // extended:Unknown; PTS_2-RNA; 1.5e-70" "PTS_2-RNA // RNA 2'-phosphotransferase, Tpt1 / KptA family;1.5e-70" 12231009; RNA 2'-phosphotransferase;3e-55 ; 15595252; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-101 AE004445 74% similar to hypothetical protein YjiI [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0055_at hypothetical protein PA0055 Pseudomonas PA0055 "PA0055 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16127884; (NC_002696) hypothetical protein [Caulobacter crescentus CB15];2e-44 ; 15595253; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-90 AE004445 "Hypothetical, unclassified, unknown" Class 4 PA0056_at probable transcriptional regulator PA0056 HTH_1 Pseudomonas PA0056 PA0056 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 1.5e-18 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;1.5e-18 /// LysR_substrate // LysR substrate binding domain;1.4e-59" "15595254; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-172 ; 15601806; (NC_002506) transcriptional regulator, LysR family [Vibrio cholerae];1e-55" AE004445 55% similar to regulator GstR [Rhizobium leguminosarum]. Transcriptional regulators Class 3 PA0057_at hypothetical protein PA0057 lactamase_B Pseudomonas PA0057 "PA0057 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" lactamase_B // Metallo-beta-lactamase superfamily;2.4e-15 d1jjea_ // d.157.1.1 // Zn metallo-beta-lactamase;7.29e-43 15838874; (NC_002488) hypothetical protein [Xylella fastidiosa 9a5c];2e-90 ; 15595255; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-166 numtm:1;Nin-prob:0.90277;Type:SIGNAL;Span:TM from 5 to 27: Eval:0.65238 AE004445 "Hypothetical, unclassified, unknown" Class 4 PA0058_at hypothetical protein PA0058 Pseudomonas PA0058 "PA0058 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595256; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-136 ; 5916091; (AF130250) hypothetical protein [Ralstonia eutropha];9e-48 AE004445 "Hypothetical, unclassified, unknown" Class 4 PA0059_osmC_at osmotically inducible protein OsmC PA0059 OsmC Pseudomonas PA0059 "PA0059 /GENE=osmC /DEF=osmotically inducible protein OsmC /FUNCTION=Adaptation, protection" 6950 // response to stress // extended:inferred from electronic annotation; OsmC; 1.6e-35 OsmC // OsmC-like protein;1.6e-35 16760310; (NC_003198) osmotically inducible protein C [Salmonella enterica subsp. enterica serovar Typhi];3e-45 ; 15595257; (NC_002516) osmotically inducible protein OsmC [Pseudomonas aeruginosa];1e-81 AE004445 69% similar to osmotically inducible protein OsmC [Escherichia coli]. "Adaptation, protection" 96417852; 98326816 Class 2 PA0060_at conserved hypothetical protein PA0060 Pseudomonas PA0060 "PA0060 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595258; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];8e-38 ; 15595237; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];4e-13 AE004445 58% similar to hypothetical protein YnfD [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0061_at hypothetical protein PA0061 Pseudomonas PA0061 "PA0061 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595259; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-81 ; 15595260; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];9e-13 AE004445 "Hypothetical, unclassified, unknown" Class 4 PA0062_at hypothetical protein PA0062 Pseudomonas PA0062 "PA0062 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595260; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-79 ; 15595259; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];9e-13 AE004445 "Hypothetical, unclassified, unknown" Class 4 PA0063_at hypothetical protein PA0063 Pseudomonas PA0063 "PA0063 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 13472615; (NC_002678) hypothetical protein [Mesorhizobium loti];6e-79 ; 15595261; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004446 "Hypothetical, unclassified, unknown" Class 4 PA0064_at hypothetical protein PA0064 Pseudomonas PA0064 "PA0064 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595262; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:8;Nin-prob:0.99605;Type: ;Span:TM from 28 to 50: Eval:0.43971/TM from 70 to 89: Eval:0.60530/TM from 101 to 123: Eval:0.87674/TM from 151 to 173: Eval:0.40029/TM from 186 to 208: Eval:0.91920/TM from 223 to 245: Eval:0.38473/TM from 258 to 280: Eval:0.74176/TM from 290 to 312: Eval:0.78051 AE004446 "Hypothetical, unclassified, unknown" Class 4 PA0065_at hypothetical protein PA0065 Hydrolase Pseudomonas PA0065 "PA0065 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16787 // hydrolase activity // extended:Unknown; Hydrolase; 8.6e-25 3.8.1.3 EC:3.8.1.3; DEH2_MORSP HALOACETATE DEHALOGENASE H-2 (EC 3.8.1.3).;9.2e-27 ; EC:3.1.3.18; GPH_SYNP7 PHOSPHOGLYCOLATE PHOSPHATASE (EC 3.1.3.18) (PGP).;3.2e-34 ; EC:5.4.2.6; PGMB_LACLA BETA-PHOSPHOGLUCOMUTASE (EC 5.4.2.6) (BETA-PGM).;3.1e-26 Hydrolase // haloacid dehalogenase-like hydrolase;8.6e-25 d1lvha_ // c.108.1.6 // beta-Phosphoglucomutase;1.78e-38 "15893709; (NC_003030) Predicted phosphatase, HAD family [Clostridium acetobutylicum];5e-48 ; 15595263; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-128" EC:3.1.3.18 // GPH_SYNP7 PHOSPHOGLYCOLATE PHOSPHATASE (EC 3.1.3.18) (PGP).;2.05e-49 /// EC:3.8.1.3 // DEH2_MORSP HALOACETATE DEHALOGENASE H-2 (EC 3.8.1.3).;2.06e-34 /// EC:5.4.2.6 // PGMB_LACLA BETA-PHOSPHOGLUCOMUTASE (EC 5.4.2.6) (BETA-PGM).;7.24e-38 AE004446 54% similar to hypothetical protein Rv2233 [Mycobacterium tuberculosis]; 39% similar to phosphoglycolate phosphatase [Alcaligenes eutrophus] "Hypothetical, unclassified, unknown" Class 4 PA0066_at conserved hypothetical protein PA0066 hexapep Pseudomonas PA0066 "PA0066 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 2.3.1.79 EC:2.3.1.79; MAA_ECOLI MALTOSE O-ACETYLTRANSFERASE (EC 2.3.1.79) (MALTOSE TRANSACETYLASE).;1e-24 hexapep // Bacterial transferase hexapeptide (three repeats);3.7e-06 d1qrea_ // b.81.1.5 // Carbonic anhydrase;5.52e-48 "15640090; (NC_002505) carbonic anhydrase, family 3 [Vibrio cholerae];2e-65 ; 15595264; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-100" EC:2.7.7.13 // MPG1_YEAST MANNOSE-1-PHOSPHATE GUANYLTRANSFERASE (EC 2.7.7.13) (ATP-MANNOSE-1- PHOSPHATE GUANYLYLTRANSFERASE) (NDP-HEXOSE PYROPHOSPHORYLASE).;3.78e-08 /// EC:2.3.1.18 // THGA_LACLA GALACTOSIDE O-ACETYLTRANSFERASE (EC 2.3.1.18) (THIOGALACTOSIDE ACETYLTRANSFERASE).;1.04e-29 AE004446 81% similar to putative transferase YrdA [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0067_prlC_at oligopeptidase A PA0067 Peptidase_M3 Pseudomonas PA0067 "PA0067 /GENE=prlC /DEF=oligopeptidase A /FUNCTION=Translation, post-translational modification, degradation" 8944 // oligopeptidase A activity // extended:inferred from electronic annotation; 3.4.24.70; 2.96e-241 /// 4222 // metalloendopeptidase activity // extended:inferred from electronic annotation; Peptidase_M3; 5.2e-193 3.4.24.70 EC:3.4.24.70; OPDA_SALTY OLIGOPEPTIDASE A (EC 3.4.24.70).;5.2e-217 ; EC:3.4.15.5; DCP_SALTY PEPTIDYL-DIPEPTIDASE DCP (EC 3.4.15.5) (DIPEPTIDYL CARBOXYPEPTIDASE).;3.4e-217 ; EC:3.4.24.37; PRTD_YEAST SACCHAROLYSIN (EC 3.4.24.37) (PROTEASE D) (PROTEINASE YSCD) (OLIGOPEPTIDASE YSCD).;1.6e-221 Peptidase_M3 // Peptidase family M3;5.2e-193 d1i1ip_ // d.92.1.5 // Neurolysin (endopeptidase 24.16);2.42e-245 7288240; (AF146608) putative oligopeptidase A [Aeromonas hydrophila];0.0 ; 15595265; (NC_002516) oligopeptidase A [Pseudomonas aeruginosa];0.0 EC:3.4.24.70 // OPDA_SALTY OLIGOPEPTIDASE A (EC 3.4.24.70).;2.96e-241 /// EC:3.4.15.5 // DCP_SALTY PEPTIDYL-DIPEPTIDASE DCP (EC 3.4.15.5) (DIPEPTIDYL CARBOXYPEPTIDASE).;2.45e-254 AE004446 73% similar to oligopeptidase A [Escherichia coli]. "Translation, post-translational modification, degradation" 99011323 Class 2 PA0068_at hypothetical protein PA0068 Pseudomonas PA0068 "PA0068 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595266; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];8e-50 ; 15803863; (NC_002655) Z4708 gene product [Escherichia coli O157:H7 EDL933];4e-07 AE004446 "Hypothetical, unclassified, unknown" Class 4 PA0069_at conserved hypothetical protein PA0069 Radical_SAM Pseudomonas PA0069 "PA0069 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" Radical_SAM // Radical SAM superfamily;1.6e-23 15595267; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15888065; (NC_003062) AGR_C_1309p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];e-105 AE004446 72% similar to hypothetical protein [Brucella melitensis]. "Hypothetical, unclassified, unknown" Class 4 PA0070_at hypothetical protein PA0070 Pseudomonas PA0070 "PA0070 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 15595268; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-171 AE004446 "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0071_at hypothetical protein PA0071 DUF323 Pseudomonas PA0071 "PA0071 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF323 // Domain of unknown function (DUF323);2.4e-84 15603690; (NC_002663) unknown [Pasteurella multocida];1e-54 ; 15595269; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004446 42% similar to a region of endo-xylanase XylR [Bacillus stearothermophilus]. "Hypothetical, unclassified, unknown" Class 4 PA0072_at hypothetical protein PA0072 DUF214 Pseudomonas PA0072 "PA0072 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 16020 // membrane // extended:Unknown; FtsX; 4.2e-18 FtsX // Predicted permease;4.2e-18 15595270; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15603689; (NC_002663) unknown [Pasteurella multocida];1e-57 numtm:5;Nin-prob:0.7875;Type: ;Span:TM from 20 to 39: Eval:0.90977/TM from 272 to 294: Eval:0.45310/TM from 301 to 323: Eval:0.89592/TM from 327 to 349: Eval:0.36051/TM from 361 to 383: Eval:0.69911 AE004446 "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0073_at probable ATP-binding component of ABC transporter PA0073 ABC_tran Pseudomonas PA0073 PA0073 /DEF=probable ATP-binding component of ABC transporter /FUNCTION=Transport of small molecules 4009 // ATP-binding cassette (ABC) transporter activity // extended:inferred from electronic annotation; ABC_tran; 6.5e-41 ABC_tran // ABC transporter;6.5e-41 d1l2ta_ // c.37.1.12 // MJ0796;2.82e-41 15603688; (NC_002663) AttE [Pasteurella multocida];4e-36 ; 15595271; (NC_002516) probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa];e-132 AE004446 59% similar to putative ATP-binding component of a transport system YbjZ [Escherichia coli]. Transport of small molecules Class 3 PA0074_ppkA_at serine/threonine protein kinase PpkA PA0074 pkinase Pseudomonas PA0074 "PA0074 /GENE=ppkA /DEF=serine/threonine protein kinase PpkA /FUNCTION=Adaptation, protection; Translation, post-translational modification, degradation" 4672 // protein kinase activity // extended:inferred from electronic annotation; pkinase; 3.4e-58 2.7.1.38 "EC:2.7.1.38; KPBH_HUMAN PHOSPHORYLASE B KINASE GAMMA CATALYTIC CHAIN, TESTIS/LIVER ISOFORM (EC 2.7.1.38) (PHK-GAMMA-T) (PSK-C3) (PHOSPHORYLASE KINASE GAMMA SUBUNIT).;2.1e-73" pkinase // Protein kinase domain;3.4e-58 d1ia8a_ // d.144.1.1 // Cell cycle checkpoint kinase chk1;2.67e-62 15595272; (NC_002516) serine/threonine protein kinase PpkA [Pseudomonas aeruginosa];0.0 ; 5787973; (AF035395) serine/threonine protein kinase PpkA [Pseudomonas aeruginosa];0.0 "EC:3.1.13.4 // PAN3_YEAST PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3 (EC 3.1.13.4) (PAB1P-DEPENDENT POLY(A)-NUCLEASE).;2.99e-13 /// EC:2.7.1.38 // KPBH_HUMAN PHOSPHORYLASE B KINASE GAMMA CATALYTIC CHAIN, TESTIS/LIVER ISOFORM (EC 2.7.1.38) (PHK-GAMMA-T) (PSK-C3) (PHOSPHORYLASE KINASE GAMMA SUBUNIT).;3.18e-75 /// EC:4.6.1.2 // HSER_HUMAN HEAT-STABLE ENTEROTOXIN RECEPTOR PRECURSOR (GC-C) (INTESTINAL GUANYLATE CYCLASE) (EC 4.6.1.2) (STA RECEPTOR).;1.01e-73 /// Hanks:KLG // A39712 (KLG) KINASES:5.14.2 | PTK Group B membrane spanning protein tyrosine kinases.PTK Other membrane spanning kinases .KLG;1e-103" AE004446 "Adaptation, protection; Translation, post-translational modification, degradation" 99069359 Class 1 PA0075_at probable phosphoprotein phosphatase PA0075 PP2C Pseudomonas PA0075 PA0075 /DEF=probable phosphoprotein phosphatase /FUNCTION=Putative enzymes 3824 // catalytic activity // extended:Unknown; PP2C; 4.8e-06 PP2C // Protein phosphatase 2C;4.8e-06 d1a6q__ // d.158.1.1 // Protein serine/threonine phosphatase 2C;1.29e-52 15595273; (NC_002516) probable phosphoprotein phosphatase [Pseudomonas aeruginosa];e-134 ; 15596867; (NC_002516) serine/threonine phosphoprotein phosphatase Stp1 [Pseudomonas aeruginosa];6e-49 AE004446 51% similar to putative phosphoprotein phosphatase ppp [Mycobacterium tuberculosis]. Putative enzymes Class 3 PA0076_at hypothetical protein PA0076 Pseudomonas PA0076 "PA0076 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15890652; (NC_003063) AGR_L_1064p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];5e-21 ; 15595274; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-131 AE004446 "Hypothetical, unclassified, unknown" Class 4 PA0077_at hypothetical protein PA0077 Pseudomonas PA0077 "PA0077 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 13472159; (NC_002678) hypothetical protein [Mesorhizobium loti];e-166 ; 15595275; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:1;Nin-prob:0.80555;Type: ;Span:TM from 370 to 392: Eval:0.80402 AE004446 40% similar to IcmF protein [Legionella pneumophila]. "Hypothetical, unclassified, unknown" Class 4 PA0078_at hypothetical protein PA0078 OmpA Pseudomonas PA0078 "PA0078 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" OmpA // OmpA family;3.3e-29 15595276; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15890650; (NC_003063) AGR_L_1060p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];2e-61 numtm:1;Nin-prob:0.04673;Type: ;Span:TM from 245 to 267: Eval:0.60790 AE004447 53% similar in the C-terminal ~120 amino acids to motility protein B [Bacillus subtilis]. "Hypothetical, unclassified, unknown" Class 4 PA0079_at hypothetical protein PA0079 Pseudomonas PA0079 "PA0079 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF876 // Bacterial protein of unknown function (DUF876);2.6e-277 15890649; (NC_003063) AGR_L_1059p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];e-107 ; 15595277; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004447 75% similar over a small region in the C-terminus to hypothetical protein z29f [Vibrio cholerae]. "Hypothetical, unclassified, unknown" Class 4 PA0080_at hypothetical protein PA0080 Pseudomonas PA0080 "PA0080 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595278; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];6e-84 ; 15130929; (AJ320483) SciN protein [Salmonella enterica subsp. enterica serovar Typhimurium];4e-23 AE004447 "Hypothetical, unclassified, unknown" Class 4 PA0081_at hypothetical protein PA0081 FHA Pseudomonas PA0081 "PA0081 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" FHA // FHA domain;7.4e-15 d1lgpa_ // b.26.1.2 // Cell cycle checkpoint protein Chfr;5.17e-10 15595279; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 13472144; (NC_002678) hypothetical protein [Mesorhizobium loti];3e-54 AE004447 41% similar to a region of circumsporozoite protein [Plasmodium berghei]. "Hypothetical, unclassified, unknown" Class 4 PA0082_at hypothetical protein PA0082 Pseudomonas PA0082 "PA0082 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 13472137; (NC_002678) hypothetical protein [Mesorhizobium loti];6e-25 ; 15595280; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004447 "Hypothetical, unclassified, unknown" Class 4 PA0083_at conserved hypothetical protein PA0083 Pseudomonas PA0083 "PA0083 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF770 // Protein of unknown function (DUF770);3e-102 15595281; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];3e-92 ; 16763655; (NC_003197) putative cytoplasmic protein [Salmonella typhimurium LT2];5e-63 AE004447 61% similar to putative 19.5 kDa protein [Edwardsiella ictaluri]. "Hypothetical, unclassified, unknown" Class 4 PA0084_at conserved hypothetical protein PA0084 Pseudomonas PA0084 "PA0084 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF877 // Protein of unknown function (DUF877);0 15595282; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15130924; (AJ320483) SciI protein [Salmonella enterica subsp. enterica serovar Typhimurium];0.0 AE004447 66% similar to putative 54.5 kDa protein [Edwardsiella ictaluri]. "Hypothetical, unclassified, unknown" Class 4 PA0085_at conserved hypothetical protein PA0085 Pseudomonas PA0085 "PA0085 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF796 // Protein of unknown function (DUF796);2e-70 16763662; (NC_003197) putative cytoplasmic protein [Salmonella typhimurium LT2];8e-34 ; 15595283; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];8e-91 AE004447 47% similar to putative 17.8 kDa protein [Edwardsiella ictaluri] "Hypothetical, unclassified, unknown" Class 4 PA0086_at hypothetical protein PA0086 Pseudomonas PA0086 "PA0086 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595284; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-157 ; 15130920; (AJ320483) SciE protein [Salmonella enterica subsp. enterica serovar Typhimurium];1e-36 AE004447 "Hypothetical, unclassified, unknown" Class 4 PA0087_at hypothetical protein PA0087 Pseudomonas PA0087 "PA0087 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595285; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-91 ; 16763651; (NC_003197) putative cytoplasmic protein [Salmonella typhimurium LT2];4e-14 AE004447 45% similar to putative 18.8 kDa protein [Edwardsiella ictaluri]. "Hypothetical, unclassified, unknown" Class 4 PA0088_at hypothetical protein PA0088 Pseudomonas PA0088 "PA0088 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF879 // Bacterial protein of unknown function (DUF879);0 15130918; (AJ320483) SciC protein [Salmonella enterica subsp. enterica serovar Typhimurium];e-125 ; 15595286; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004447 "Hypothetical, unclassified, unknown" Class 4 PA0089_at hypothetical protein PA0089 Pseudomonas PA0089 "PA0089 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15130917; (AJ320483) SciB protein [Salmonella enterica subsp. enterica serovar Typhimurium];1e-47 ; 15595287; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004447 "Hypothetical, unclassified, unknown" Class 4 PA0090_at probable ClpA/B-type chaperone PA0090 AAA Pseudomonas PA0090 "PA0090 /DEF=probable ClpA/B-type chaperone /FUNCTION=Translation, post-translational modification, degradation" 3754 // chaperone activity // extended:inferred from electronic annotation; Clp_N; 0.0094 Clp_N // Clp amino terminal domain;0.0094 d1jbka_ // c.37.1.13 // ClpB;7.09e-58 15595288; (NC_002516) probable ClpA/B-type chaperone [Pseudomonas aeruginosa];0.0 ; 13472136; (NC_002678) probable ClpA/B-type protease [Mesorhizobium loti];0.0 EC:3.4.21.53 // LON_VIBPA ATP-DEPENDENT PROTEASE LA (EC 3.4.21.53).;2.16e-105 AE004447 56% similar to putative ClpB protein [Synechococcus sp.]. "Translation, post-translational modification, degradation" Class 3 PA0091_at conserved hypothetical protein PA0091 Pseudomonas PA0091 "PA0091 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "DUF586 // Protein of unknown function, DUF586;2.8e-59" 15595289; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15597881; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 AE004447 N-terminal ~500 amino acids 51-53% similar to VgrE and VgrG proteins [E. coli]. "Hypothetical, unclassified, unknown" Class 4 PA0092_at hypothetical protein PA0092 Pseudomonas PA0092 "PA0092 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595290; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-46 AE004448 "Hypothetical, unclassified, unknown" Class 4 PA0093_at hypothetical protein PA0093 Pseudomonas PA0093 "PA0093 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" PAAR_motif // PAAR motif;1.1e-16 15595291; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15130940; (AJ320483) Rhs1 protein [Salmonella enterica subsp. enterica serovar Typhimurium];5e-14 numtm:3;Nin-prob:0.54891;Type: ;Span:TM from 13 to 35: Eval:0.89030/TM from 39 to 61: Eval:0.89968/TM from 189 to 211: Eval:0.76363 AE004448 "Hypothetical, unclassified, unknown" Class 4 PA0094_at hypothetical protein PA0094 Pseudomonas PA0094 "PA0094 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595292; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];7e-81 AE004448 "Hypothetical, unclassified, unknown" Class 4 PA0095_at conserved hypothetical protein PA0095 Pseudomonas PA0095 "PA0095 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "DUF586 // Protein of unknown function, DUF586;2.8e-59" 15595293; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15597881; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 AE004448 N-tN-terminal ~500 amino acids 50% similar to VgrE and VgrG proteins [E. coli]. "Hypothetical, unclassified, unknown" Class 4 PA0096_at hypothetical protein PA0096 Pseudomonas PA0096 "PA0096 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595294; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];4e-78 ; 13472155; (NC_002678) hypothetical protein [Mesorhizobium loti];7e-23 AE004448 "Hypothetical, unclassified, unknown" Class 4 PA0097_at hypothetical protein PA0097 Pseudomonas PA0097 "PA0097 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595295; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 13472150; (NC_002678) hypothetical protein [Mesorhizobium loti];3e-65 AE004448 "Hypothetical, unclassified, unknown" Class 4 PA0098_at hypothetical protein PA0098 Pseudomonas PA0098 "PA0098 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1kas_1 // c.95.1.1 // Beta-ketoacyl-ACP synthase II;8.09e-08 15595296; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 13472151; (NC_002678) hypothetical protein [Mesorhizobium loti];4e-62 AE004448 "Hypothetical, unclassified, unknown" Class 4 PA0099_at hypothetical protein PA0099 Pseudomonas PA0099 "PA0099 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595297; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 13472152; (NC_002678) hypothetical protein [Mesorhizobium loti];1e-39 AE004448 "Hypothetical, unclassified, unknown" Class 4 PA0100_at hypothetical protein PA0100 Pseudomonas PA0100 "PA0100 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595298; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004448 "Hypothetical, unclassified, unknown" Class 4 PA0101_at hypothetical protein PA0101 HEAT_PBS Pseudomonas PA0101 "PA0101 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595299; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004448 "Hypothetical, unclassified, unknown" Class 4 PA0102_at probable carbonic anhydrase PA0102 Pro_CA Pseudomonas PA0102 PA0102 /DEF=probable carbonic anhydrase /FUNCTION=Central intermediary metabolism 4089 // carbonate dehydratase activity // extended:inferred from electronic annotation; Pro_CA; 1.3e-60 Pro_CA // Carbonic anhydrase;1.3e-60 d1ekja_ // c.53.2.1 // beta-carbonic anhydrase;1.5e-64 15595300; (NC_002516) probable carbonic anhydrase [Pseudomonas aeruginosa];e-140 ; 15800068; (NC_002655) carbonic anhydrase [Escherichia coli O157:H7 EDL933];1e-57 AE004449 68% similar to carbonic anhydrase CynT [Escherichia coli]. Central intermediary metabolism Class 3 PA0103_at probable sulfate transporter PA0103 Sulfate_transp Pseudomonas PA0103 PA0103 /DEF=probable sulfate transporter /FUNCTION=Membrane proteins; Transport of small molecules 8271 // sulfate porter activity // extended:inferred from electronic annotation; Sulfate_transp; 9.9e-42 Sulfate_transp // Sulfate transporter family;9.9e-42 15610409; (NC_000962) hypothetical protein Rv3273 [Mycobacterium tuberculosis H37Rv];3e-89 ; 15595301; (NC_002516) probable sulfate transporter [Pseudomonas aeruginosa];0.0 numtm:7;Nin-prob:0.04274;Type: ;Span:TM from 20 to 39: Eval:0.89838/TM from 46 to 68: Eval:0.61765/TM from 83 to 105: Eval:0.70745/TM from 118 to 140: Eval:0.53723/TM from 197 to 219: Eval:0.68180/TM from 250 to 272: Eval:0.60962/TM from 327 to 349: Eval:0.54745 AE004449 59% similar to hypothetical protein Rv3273 [Mycobacterium tuberculosis]. Membrane proteins; Transport of small molecules Class 3 PA0104_at hypothetical protein PA0104 Pseudomonas PA0104 "PA0104 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595302; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-112 AE004449 "Hypothetical, unclassified, unknown" Class 4 PA0105_coxB_at "cytochrome c oxidase, subunit II" PA0105 COX2 Pseudomonas PA0105 "PA0105 /GENE=coxB /DEF=cytochrome c oxidase, subunit II /FUNCTION=Energy metabolism" 4129 // cytochrome c oxidase activity // extended:Unknown; COX2_TM; 1.1e-06 "cytochrome_c // Cytochrome c;8.4e-05 /// COX2_TM // Cytochrome C oxidase subunit II, transmembrane domain;1.1e-06 /// COX2 // Cytochrome C oxidase subunit II, periplasmic domain;4.5e-47" d1ctj__ // a.3.1.1 // Cytochrome c6 (synonym: cytochrome c553);3.41e-12 /// d1ar1b1 // b.6.1.2 // Cytochrome c oxidase;1.32e-46 "15595303; (NC_002516) cytochrome c oxidase, subunit II [Pseudomonas aeruginosa];0.0 ; 16127637; (NC_002696) cytochrome c oxidase, subunit II [Caulobacter crescentus CB15];3e-48" numtm:3;Nin-prob:0.98864;Type: ;Span:TM from 7 to 29: Eval:0.75814/TM from 44 to 66: Eval:0.94517/TM from 87 to 109: Eval:0.50691 EC:1.7.99.6 // NOSZ_RHIME NITROUS-OXIDE REDUCTASE PRECURSOR (EC 1.7.99.6) (N(2)OR) (N2O REDUCTASE).;4.81e-67 AE004449 56% similar to cytochrome c oxidase II [Paracoccus denitrificans]. Energy metabolism 95379947 Class 2 PA0106_coxA_at "cytochrome c oxidase, subunit I" PA0106 COX1 Pseudomonas PA0106 "PA0106 /GENE=coxA /DEF=cytochrome c oxidase, subunit I /FUNCTION=Energy metabolism" 4129 // cytochrome c oxidase activity // extended:Unknown; COX1; 3.6e-253 COX1 // Cytochrome C and Quinol oxidase polypeptide I;3.6e-253 d1ar1a1 // f.2.1.3 // Cytochrome c oxidase;1.21e-214 "15595304; (NC_002516) cytochrome c oxidase, subunit I [Pseudomonas aeruginosa];0.0 ; 1177574; (X89566) cytochrome-c oxidase sbunit I [Nitrobacter winogradskyi];e-180" numtm:12;Nin-prob:0.99662;Type: ;Span:TM from 35 to 57: Eval:0.95197/TM from 77 to 99: Eval:0.83974/TM from 119 to 141: Eval:0.66992/TM from 161 to 183: Eval:0.85769/TM from 203 to 225: Eval:0.54811/TM from 254 to 276: Eval:0.88237/TM from 283 to 305: Eval:0.99436/TM from 320 to 342: Eval:0.91446/TM from 355 to 377: Eval:0.95809/TM from 392 to 414: Eval:0.82008/TM from 431 to 453: Eval:0.51490/TM from 468 to 490: Eval:0.64171 AE004449 "71% similar to cytochrome-c oxidase, subunit I [Bradyrhizobium japonicum]." Energy metabolism Class 2 PA0107_at conserved hypothetical protein PA0107 Pseudomonas PA0107 PA0107 /DEF=conserved hypothetical protein /FUNCTION=Energy metabolism CtaG_Cox11 // Cytochrome c oxidase assembly protein CtaG / Cox11;4.9e-78 8134375; Cytochrome c oxidase assembly protein ctaG;3e-25 ; 15595305; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-103 AE004449 55% similar to probable cytochrome c assembly protein [Paracoccus denitrificans]. Energy metabolism Class 4 PA0108_coIII_at 1.9.3.1 "cytochrome c oxidase, subunit III" PA0108 COX3 Pseudomonas PA0108 "PA0108 /GENE=coIII /DEF=cytochrome c oxidase, subunit III /FUNCTION=Energy metabolism" 4129 // cytochrome c oxidase activity // extended:Unknown; COX3; 6e-49 COX3 // Cytochrome c oxidase subunit III;6e-49 "15964662; (NC_003047) PUTATIVE CYTOCHROME C OXIDASE SUBUNIT III TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti];2e-60 ; 15595306; (NC_002516) cytochrome c oxidase, subunit III [Pseudomonas aeruginosa];e-180" numtm:8;Nin-prob:0.95257;Type: ;Span:TM from 13 to 35: Eval:0.36423/TM from 45 to 67: Eval:0.77632/TM from 88 to 110: Eval:0.60957/TM from 161 to 180: Eval:0.76415/TM from 193 to 210: Eval:0.67959/TM from 220 to 242: Eval:0.78182/TM from 244 to 261: Eval:0.46345/TM from 276 to 294: Eval:0.63449 AE004449 "cytochrome c oxidase, subunit III [Rhodobacter sphaeroides]." Energy metabolism Class 2 PA0109_at hypothetical protein PA0109 Pseudomonas PA0109 "PA0109 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 15595307; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];9e-33 numtm:2;Nin-prob:0.02956;Type:SIGNAL;Span:TM from 4 to 25: Eval:0.81669/TM from 38 to 57: Eval:0.77199 AE004449 "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0110_at hypothetical protein PA0110 Pseudomonas PA0110 "PA0110 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15888116; (NC_003062) AGR_C_1411p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];1e-09 ; 15595308; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-157 numtm:2;Nin-prob:0.98747;Type:SIGNAL;Span:TM from 29 to 51: Eval:0.30070/TM from 229 to 248: Eval:0.76733 AE004449 "Hypothetical, unclassified, unknown" Class 4 PA0111_at hypothetical protein PA0111 Pseudomonas PA0111 "PA0111 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595309; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-109 numtm:1;Nin-prob:0.92728;Type:SIGNAL;Span:TM from 20 to 38: Eval:0.86366 AE004449 "Hypothetical, unclassified, unknown" Class 4 PA0112_at hypothetical protein PA0112 COX15-CtaA Pseudomonas PA0112 "PA0112 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 6461 // protein complex assembly // extended:inferred from mutant phenotype; COX15-CtaA; 5.8e-06 COX15-CtaA // Cytochrome oxidase assembly protein;5.8e-06 15595310; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15837960; (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c];2e-57 numtm:6;Nin-prob:0.99272;Type: ;Span:TM from 79 to 101: Eval:0.88199/TM from 114 to 131: Eval:0.86382/TM from 141 to 163: Eval:0.37028/TM from 176 to 195: Eval:0.69628/TM from 245 to 267: Eval:0.71913/TM from 272 to 294: Eval:0.68508 AE004449 49% similar to a region of putative heme O oxygenase [Aquifex aeolicus]. "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0113_at probable cytochrome c oxidase assembly factor PA0113 UbiA Pseudomonas PA0113 PA0113 /DEF=probable cytochrome c oxidase assembly factor /FUNCTION=Energy metabolism 16020 // membrane // extended:Unknown; UbiA; 2.4e-72 UbiA // UbiA prenyltransferase family;2.4e-72 15837961; (NC_002488) cytochrome C oxidase assembly factor [Xylella fastidiosa 9a5c];3e-74 ; 15595311; (NC_002516) probable cytochrome c oxidase assembly factor [Pseudomonas aeruginosa];e-175 numtm:8;Nin-prob:0.99588;Type: ;Span:TM from 24 to 42: Eval:0.64525/TM from 52 to 74: Eval:0.93626/TM from 95 to 117: Eval:0.85641/TM from 122 to 142: Eval:0.73022/TM from 149 to 168: Eval:0.90338/TM from 218 to 240: Eval:0.95252/TM from 245 to 267: Eval:0.73925/TM from 280 to 299: Eval:0.57640 AE004449 59% similar to cytochrome c oxidase folding protein [Synechocystis sp.]. Energy metabolism Class 3 PA0114_at conserved hypothetical protein PA0114 SCO1-SenC Pseudomonas PA0114 "PA0114 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 6118 // electron transport // extended:Unknown; SCO1-SenC; 5.1e-30 SCO1-SenC // SCO1/SenC;5.1e-30 "d1jfua_ // c.47.1.10 // Membrane-anchored thioredoxin-like protein TlpA, soluble domain;1.87e-20" 15595312; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-119 ; 1351718; Hypothetical protein in APT 3'region;4e-50 numtm:1;Nin-prob:0.98089;Type:SIGNAL;Span:TM from 7 to 29: Eval:0.53843 AE004449 73% similar to hypothetical protein [Pseudomonas stutzeri]. "Hypothetical, unclassified, unknown" Class 4 PA0115_at conserved hypothetical protein PA0115 Acetyltransf Pseudomonas PA0115 "PA0115 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 8080 // N-acetyltransferase activity // extended:non-traceable author statement; Acetyltransf; 2.9e-09 Acetyltransf // Acetyltransferase (GNAT) family;2.9e-09 d1cjwa_ // d.108.1.1 // Serotonin N-acetyltranferase;2.69e-15 "15595313; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];4e-84 ; 16130202; (NC_000913) orf, hypothetical protein [Escherichia coli K12];5e-42" AE004449 69% similar to hypothetical protein ElaA [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0116_at hypothetical protein PA0116 DUF24 Pseudomonas PA0116 "PA0116 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF24 // Transcriptional regulator;1.1e-25 15597909; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];1e-51 ; 15595314; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-90 AE004450 65% similar to hypothetical protein Rv3095 [Mycobacterium tuberculosis]. "Hypothetical, unclassified, unknown" Class 4 PA0117_at probable short chain dehydrogenase PA0117 adh_short Pseudomonas PA0117 PA0117 /DEF=probable short chain dehydrogenase /FUNCTION=Putative enzymes 16491 // oxidoreductase activity // extended:Unknown; adh_short; 3.1e-22 1.1.1.253 EC:1.1.1.253; PTR1_LEITA PTERIDINE REDUCTASE 1 (EC 1.1.1.253) (H REGION METHOTREXATE RESISTANCE PROTEIN).;1.2e-40 ; EC:1.1.1.233; DHMA_FLAS1 N-ACYLMANNOSAMINE 1-DEHYDROGENASE (EC 1.1.1.233) (NAM-DH).;5.5e-37 adh_short // short chain dehydrogenase;3.1e-22 "d1g0oa_ // c.2.1.2 // 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase);2.97e-42" "16124897; (NC_002696) oxidoreductase, short-chain dehydrogenase/reductase family [Caulobacter crescentus CB15];3e-71 ; 15595315; (NC_002516) probable short chain dehydrogenase [Pseudomonas aeruginosa];e-140" EC:1.1.1.140 // SRLD_ECOLI SORBITOL-6-PHOSPHATE 2-DEHYDROGENASE (EC 1.1.1.140) (GLUCITOL-6- PHOSPHATE DEHYDROGENASE) (KETOSEPHOSPHATE REDUCTASE).;1.02e-44 AE004450 44% similar to putative alcohol dehydrogenase [Rhizobium leguminosarum bv. viciae]. Putative enzymes Class 3 PA0118_at hypothetical protein PA0118 HCCA_isomerase Pseudomonas PA0118 PA0118 /DEF=hypothetical protein /FUNCTION=Putative enzymes 15035 // protein disulfide oxidoreductase activity // extended:Unknown; DSBA; 1.3e-49 DSBA // DSBA-like thioredoxin domain;1.3e-49 15595316; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-111 ; 16124896; (NC_002696) conserved hypothetical protein [Caulobacter crescentus CB15];1e-37 AE004450 47% similar to 2-hydroxychromene-2-carboxylate isomerase NahD [Pseudomonas putida]. Putative enzymes Class 4 PA0119_at probable dicarboxylate transporter PA0119 SDF Pseudomonas PA0119 PA0119 /DEF=probable dicarboxylate transporter /FUNCTION=Transport of small molecules 5311 // sodium:dicarboxylate/tricarboxylate symporter activity // extended:inferred from sequence similarity; SDF; 4e-128 SDF // Sodium:dicarboxylate symporter family;4e-128 15595317; (NC_002516) probable dicarboxylate transporter [Pseudomonas aeruginosa];0.0 ; 4545128; (AF079997) DctA [Pseudomonas putida];0.0 numtm:7;Nin-prob:0.87473;Type: ;Span:TM from 16 to 38: Eval:0.41077/TM from 53 to 71: Eval:0.63986/TM from 84 to 106: Eval:0.61707/TM from 157 to 176: Eval:0.47018/TM from 229 to 251: Eval:0.34622/TM from 311 to 333: Eval:0.89598/TM from 358 to 380: Eval:0.62805 AE004450 67% similar to membrane-associated dicarboxylate transport protein DctA [Rhizobium meliloti]. Transport of small molecules 94049668 Class 3 PA0120_at probable transcriptional regulator PA0120 gntR Pseudomonas PA0120 PA0120 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; gntR; 3e-20 "gntR // Bacterial regulatory proteins, gntR family;3e-20" "d1hw1a1 // a.4.5.6 // Fatty acid responsive transcription factor FadR, N-terminal domain;1.71e-14" 6448717; (AL132991) putative transcriptional regulator [Streptomyces coelicolor A3(2)];1e-21 ; 15595318; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-122 AE004450 45% similar to putative transcriptional regulator LldR [Escherichia coli]. Transcriptional regulators Class 3 PA0121_at hypothetical protein PA0121 Pseudomonas PA0121 "PA0121 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3700 // transcription factor activity // extended:inferred from direct assay; gntR; 6.8e-06 "gntR // Bacterial regulatory proteins, gntR family;6.8e-06" 15596717; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];1e-31 ; 15595319; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-131 AE004450 44% similar to hypothetical transcriptional regulator [Streptomyces ambofaciens]. "Hypothetical, unclassified, unknown" Class 4 PA0122_at conserved hypothetical protein PA0122 Pseudomonas PA0122 "PA0122 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" Aegerolysin // Aegerolysin;6.7e-88 1078621; hemolysin - Aspergillus fumigatus;2e-22 ; 15595320; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];2e-77 AE004450 58% similar to Asp hemolysin [Aspergillus fumigatus]. "Hypothetical, unclassified, unknown" Class 4 PA0123_at probable transcriptional regulator PA0123 HTH_1 Pseudomonas PA0123 PA0123 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 2.2e-24 "LysR_substrate // LysR substrate binding domain;1.8e-46 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;2.2e-24" 15597743; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];2e-44 ; 15595321; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-170 AE004450 51% similar to transcriptional activator PtxR [Pseudomonas aeruginosa]. Transcriptional regulators Class 3 PA0124_at hypothetical protein PA0124 Pseudomonas PA0124 PA0124 /DEF=hypothetical protein /FUNCTION=Transcriptional regulators Plasmid_stabil // Plasmid stabilisation system protein;0.007 15595322; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-47 AE004450 "Hypothetical, unclassified, unknown" Class 4 PA0125_at hypothetical protein PA0125 Pseudomonas PA0125 "PA0125 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16265288; (NC_003078) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti];3e-06 ; 15595323; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];4e-37 AE004450 "Hypothetical, unclassified, unknown" Class 4 PA0126_at hypothetical protein PA0126 Pseudomonas PA0126 "PA0126 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595324; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-117 AE004450 "Hypothetical, unclassified, unknown" Class 4 PA0127_at hypothetical protein PA0127 Pseudomonas PA0127 "PA0127 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595325; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-92 ; 13937482; (U66917) hypothetical protein [Pseudomonas sp. ADP];9e-51 AE004450 "Hypothetical, unclassified, unknown" Class 4 PA0128_at conserved hypothetical protein PA0128 PhnA Pseudomonas PA0128 "PA0128 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" PhnA // PhnA protein;7.1e-34 13937480; (U66917) hypothetical protein [Pseudomonas sp. ADP];2e-53 ; 15595326; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];3e-61 AE004450 85% similar to putative alkylphosphonate uptake protein PhnA [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0129_gabP_at gamma-aminobutyrate permease PA0129 aa_permeases Pseudomonas PA0129 PA0129 /GENE=gabP /DEF=gamma-aminobutyrate permease /FUNCTION=Transport of small molecules 6810 // transport // extended:inferred from electronic annotation; aa_permeases; 3.4e-142 aa_permeases // Amino acid permease;3.4e-142 16130577; (NC_000913) transport permease protein of gamma-aminobutyrate [Escherichia coli K12];e-167 ; 15595327; (NC_002516) gamma-aminobutyrate permease [Pseudomonas aeruginosa];0.0 numtm:12;Nin-prob:0.80693;Type: ;Span:TM from 21 to 43: Eval:0.74289/TM from 47 to 69: Eval:0.95100/TM from 103 to 125: Eval:0.52356/TM from 135 to 154: Eval:0.68475/TM from 161 to 183: Eval:0.92096/TM from 203 to 225: Eval:0.83413/TM from 249 to 271: Eval:0.82676/TM from 296 to 318: Eval:0.49363/TM from 345 to 364: Eval:0.75080/TM from 368 to 390: Eval:0.89855/TM from 411 to 433: Eval:0.46327/TM from 438 to 457: Eval:0.78774 AE004450 77% similar to gamma-aminobutyrate permease GabP [Escherichia coli] Transport of small molecules Class 2 PA0130_at probable aldehyde dehydrogenase PA0130 aldedh Pseudomonas PA0130 PA0130 /DEF=probable aldehyde dehydrogenase /FUNCTION=Putative enzymes 16491 // oxidoreductase activity // extended:Unknown; aldedh; 9.6e-162 /// 4491 // methylmalonate-semialdehyde dehydrogenase (acylating) activity // extended:inferred from electronic annotation; 1.2.1.27; 6.88e-163 1.2.1.27 "EC:1.2.1.27; MMSA_HUMAN METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL PRECURSOR (EC 1.2.1.27) (MMSDH).;9.6e-155 ; EC:1.5.1.12; PUT2_HUMAN DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE PRECURSOR (EC 1.5.1.12) (P5C DEHYDROGENASE).;1.8e-145" aldedh // Aldehyde dehydrogenase family;9.6e-162 "d1bxsa_ // c.82.1.1 // Aldehyde reductase (dehydrogenase), ALDH;2.96e-147" 13473401; (NC_002678) malonic semialdehyde oxidative decarboxylase [Mesorhizobium loti];e-166 ; 15595328; (NC_002516) probable aldehyde dehydrogenase [Pseudomonas aeruginosa];0.0 "EC:1.2.1.27 // MMSA_HUMAN METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL PRECURSOR (EC 1.2.1.27) (MMSDH).;6.88e-163 /// EC:1.5.99.8 // PUTA_SALTY BIFUNCTIONAL PUTA PROTEIN [INCLUDES: PROLINE DEHYDROGENASE (EC 1.5.99.8) (PROLINE OXIDASE) DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE (EC 1.5.1.12) (P5C DEHYDROGENASE)].;6.61e-181 /// EC:1.5.1.12 // PUT2_HUMAN DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE PRECURSOR (EC 1.5.1.12) (P5C DEHYDROGENASE).;4.43e-158" AE004451 68% similar to methylmalonate semialdehyde dehydrogenase MmsA [Pseudomonas aeruginosa]. Putative enzymes Class 3 PA0131_at hypothetical protein PA0131 Pseudomonas PA0131 "PA0131 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 13474237; (NC_002678) hypothetical protein [Mesorhizobium loti];1e-22 ; 15595329; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-50 AE004451 "Hypothetical, unclassified, unknown" Class 4 PA0132_at 2.6.1.18 beta-alanine--pyruvate transaminase PA0132 aminotran_3 Pseudomonas PA0132 PA0132 /DEF=beta-alanine--pyruvate transaminase /FUNCTION=Amino acid biosynthesis and metabolism 16223 // beta-alanine-pyruvate aminotransferase activity // extended:Unknown; 2.6.1.18; 6.86e-128 /// 8483 // transaminase activity // extended:Unknown; aminotran_3; 6.9e-157 4.1.1.64 "EC:4.1.1.64; DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;1.8e-103 ; EC:5.4.3.8; GSA_XANCH GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE (EC 5.4.3.8) (GSA) (GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE) (GSA-AT).;3.3e-103 ; EC:2.6.1.18; OAPT_PSEPU OMEGA-AMINO ACID--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.18) (OMEGA-APT) (BETA-ALANINE--PYRUVATE AMINOTRANSFERASE).;2.2e-119" aminotran_3 // Aminotransferase class-III;6.9e-157 "d1qj5a_ // c.67.1.4 // Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA;2.32e-116" 538683; beta-alanine--pyruvate transaminase (EC 2.6.1.18) - Pseudomonas putida;0.0 ; 15595330; (NC_002516) beta-alanine--pyruvate transaminase [Pseudomonas aeruginosa];0.0 "EC:4.1.99.1 // TNAA_PROVU TRYPTOPHANASE (EC 4.1.99.1) (L-TRYPTOPHAN INDOLE-LYASE) (TNASE).;1.18e-92 /// EC:4.1.1.64 // DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;1.08e-113 /// EC:2.6.1.18 // OAPT_PSEPU OMEGA-AMINO ACID--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.18) (OMEGA-APT) (BETA-ALANINE--PYRUVATE AMINOTRANSFERASE).;6.86e-128" AE004451 87% similar to beta-alanine--pyruvate transaminase [Pseudomonas putida]. Amino acid biosynthesis and metabolism Class 2 PA0133_at probable transcriptional regulator PA0133 LysR_substrate Pseudomonas PA0133 PA0133 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 7.8e-17 "LysR_substrate // LysR substrate binding domain;7.7e-23 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;7.8e-17" 15595331; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-172 ; 15596342; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];4e-53 AE004451 47% similar to transcriptional regulator OxyR [Mycobacterium xenopi]. Transcriptional regulators Class 3 PA0134_at probable guanine deaminase PA0134 ATZ_TRZ Pseudomonas PA0134 PA0134 /DEF=probable guanine deaminase /FUNCTION=Nucleotide biosynthesis and metabolism 16787 // hydrolase activity // extended:Unknown; Amidohydro_1; 5.9e-57 3.5.2.7 EC:3.5.2.7; HUTI_YERPE IMIDAZOLONEPROPIONASE (EC 3.5.2.7) (IMIDAZOLONE-5-PROPIONATE HYDROLASE).;9.2e-44 ; EC:3.5.1.25; NAGA_VIBFU N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE (EC 3.5.1.25) (GLCNAC 6-P DEACETYLASE).;7.2e-21 Amidohydro_1 // Amidohydrolase family;5.9e-57 d1k6wa2 // c.1.9.5 // Cytosine deaminase catalytic domain;5.93e-14 15595332; (NC_002516) probable guanine deaminase [Pseudomonas aeruginosa];0.0 ; 15596718; (NC_002516) probable guanine deaminase [Pseudomonas aeruginosa];e-145 EC:3.5.1.83 // NDDD_ALCXX N-ACYL-D-ASPARTATE DEACYLASE (EC 3.5.1.83) (N-ACYL-D-ASPARTATE AMIDOHYDROLASE).;2.78e-53 /// EC:3.5.4.2 // ADEC_METTH PROBABLE ADENINE DEAMINASE (EC 3.5.4.2) (ADENASE) (ADENINE AMINASE).;4.06e-28 /// EC:3.5.2.7 // HUTI_YERPE IMIDAZOLONEPROPIONASE (EC 3.5.2.7) (IMIDAZOLONE-5-PROPIONATE HYDROLASE).;1.39e-69 AE004451 70% similar to hypothetical protein YgfP [Escherichia coli]; 47% similar to guanine deaminase GDA [Homo sapiens] Purine metabolism Nucleotide biosynthesis and metabolism Class 3 PA0135_at hypothetical protein PA0135 Pseudomonas PA0135 "PA0135 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595333; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-21 AE004451 "Hypothetical, unclassified, unknown" Class 4 PA0136_at probable ATP-binding component of ABC transporter PA0136 ABC_tran Pseudomonas PA0136 PA0136 /DEF=probable ATP-binding component of ABC transporter /FUNCTION=Transport of small molecules 4009 // ATP-binding cassette (ABC) transporter activity // extended:inferred from electronic annotation; ABC_tran; 5.2e-56 ABC_tran // ABC transporter;4.2e-67 d1l2ta_ // c.37.1.12 // MJ0796;6.1e-58 15595334; (NC_002516) probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa];0.0 ; 13937516; (U66917) putative-ATP binding domain of ABC transporter [Pseudomonas sp. ADP];e-155 AE004451 "59% similar to putative ribose ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]." Transport of small molecules Class 3 PA0137_at probable permease of ABC transporter PA0137 Pseudomonas PA0137 PA0137 /DEF=probable permease of ABC transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp_2; 5e-79 BPD_transp_2 // Branched-chain amino acid transport system / permease component;5e-79 15595335; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];0.0 ; 13937515; (U66917) putative permease from ABC transporter [Pseudomonas sp. ADP];9e-99 numtm:8;Nin-prob:0.98777;Type: ;Span:TM from 58 to 80: Eval:0.80800/TM from 87 to 106: Eval:0.93781/TM from 116 to 138: Eval:0.63387/TM from 145 to 167: Eval:0.67062/TM from 198 to 216: Eval:0.88315/TM from 246 to 268: Eval:0.47512/TM from 288 to 310: Eval:0.96041/TM from 323 to 345: Eval:0.93037 AE004451 "59% similar to ribose ABC transporter, permease protein [Archaeoglobus fulgidus]." Membrane proteins; Transport of small molecules Class 3 PA0138_at probable permease of ABC transporter PA0138 BPD_transp_2 Pseudomonas PA0138 PA0138 /DEF=probable permease of ABC transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp_2; 8.7e-45 BPD_transp_2 // Branched-chain amino acid transport system / permease component;8.7e-45 15595336; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];e-170 ; 13937514; (U66917) putative permease from ABC transporter [Pseudomonas sp. ADP];4e-87 numtm:9;Nin-prob:0.04631;Type: ;Span:TM from 10 to 29: Eval:0.72668/TM from 34 to 56: Eval:0.84685/TM from 62 to 84: Eval:0.87806/TM from 91 to 113: Eval:0.92598/TM from 138 to 160: Eval:0.81464/TM from 190 to 212: Eval:0.45453/TM from 222 to 239: Eval:0.57762/TM from 241 to 258: Eval:0.92068/TM from 263 to 285: Eval:0.90250 AE004451 "63% similar to putative ribose ABC transporter, permease protein [Archaeoglobus fulgidus]." Membrane proteins; Transport of small molecules Class 3 PA0139_ahpC_at alkyl hydroperoxide reductase subunit C PA0139 AhpC-TSA Pseudomonas PA0139 "PA0139 /GENE=ahpC /DEF=alkyl hydroperoxide reductase subunit C /FUNCTION=Adaptation, protection" AhpC-TSA // AhpC/TSA family;1e-52 d1kyga_ // c.47.1.10 // Alkyl hydroperoxide reductase AhpC;1.57e-51 2098746; (U94336) alkyl hydroperoxide reductase subunit C [Xanthomonas campestris];5e-94 ; 15595337; (NC_002516) alkyl hydroperoxide reductase subunit C [Pseudomonas aeruginosa];e-107 AE004452 92% similar to alkyl hydroperoxide reductase subunit C [Xanthomonas campestris]. "Adaptation, protection" Class 2 PA0140_ahpF_at alkyl hydroperoxide reductase subunit F PA0140 pyr_redox Pseudomonas PA0140 "PA0140 /GENE=ahpF /DEF=alkyl hydroperoxide reductase subunit F /FUNCTION=Adaptation, protection" 15036 // disulfide oxidoreductase activity // extended:Unknown; pyr_redox; 5e-67 1.16.1.1 EC:1.16.1.1; MERA_THIFE MERCURIC REDUCTASE (EC 1.16.1.1) (HG(II) REDUCTASE).;5.4e-83 ; EC:1.4.1.13; GLTD_ECOLI GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (EC 1.4.1.13) (GLUTAMATE SYNTHASE BETA SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN).;3.6e-87 ; EC:1.18.1.1; RURE_PSEOL RUBREDOXIN-NAD(+) REDUCTASE (EC 1.18.1.1).;2.7e-70 ; EC:1.11.1.1; NAPE_ENTFA NADH PEROXIDASE (EC 1.11.1.1) (NPXASE).;6.6e-71 pyr_redox // Pyridine nucleotide-disulphide oxidoreductase;5e-67 "d1hyua3 // c.47.1.2 // Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain;1.4e-35 /// d1fl2a1 // c.3.1.5 // Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains;1.1e-47" 5902748; ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F;0.0 ; 15595338; (NC_002516) alkyl hydroperoxide reductase subunit F [Pseudomonas aeruginosa];0.0 "EC:1.8.1.4 // DLDH_HUMAN DIHYDROLIPOAMIDE DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.8.1.4).;1.56e-72 /// EC:1.13.12.10 // IUCD_ECOLI L-LYSINE 6-MONOOXYGENASE (EC 1.13.12.10) (LYSINE N6-HYDROXYLASE).;2.45e-33 /// EC:1.6.4.5 // TRXB_HUMAN THIOREDOXIN REDUCTASE (EC 1.6.4.5).;6.56e-76 /// EC:1.4.3.10 // PUO_MICRU PUTRESCINE OXIDASE (EC 1.4.3.10).;6.25e-38 /// EC:1.4.1.13 // GLTD_ECOLI GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (EC 1.4.1.13) (GLUTAMATE SYNTHASE BETA SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN).;1.36e-83 /// EC:1.14.13.22 // CYMO_ACISP CYCLOHEXANONE MONOOXYGENASE (EC 1.14.13.22).;2.34e-85 /// EC:1.5.99.7 // DHTM_METME TRIMETHYLAMINE DEHYDROGENASE (EC 1.5.99.7) (TMADH).;1.11e-82 /// EC:1.18.1.2 // ADRO_HUMAN NADPH:ADRENODOXIN OXIDOREDUCTASE, MITOCHONDRIAL PRECURSOR (EC 1.18.1.2) (ADRENODOXIN REDUCTASE) (AR) (FERREDOXIN-NADP(+) REDUCTASE).;7.28e-30 /// EC:1.11.1.1 // NAPE_ENTFA NADH PEROXIDASE (EC 1.11.1.1) (NPXASE).;3.59e-74" AE004452 87% similar to alkyl hydroperoxide reductase subunit F [Xanthomonas campestris]. "Adaptation, protection" Class 2 PA0141_at conserved hypothetical protein PA0141 DUF344 Pseudomonas PA0141 "PA0141 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF344 // Domain of unknown function (DUF344);4.1e-175 15964260; (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti];1e-81 ; 15595339; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-176 AE004452 74% similar to putative transcriptional regulator pvdS [Mycobacterium tuberculosis]. "Hypothetical, unclassified, unknown" Class 4 PA0142_at hypothetical protein PA0142 ATZ_TRZ Pseudomonas PA0142 PA0142 /DEF=hypothetical protein /FUNCTION=Putative enzymes 16787 // hydrolase activity // extended:Unknown; Amidohydro_1; 3.8e-49 3.5.1.25 EC:3.5.1.25; NAGA_VIBFU N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE (EC 3.5.1.25) (GLCNAC 6-P DEACETYLASE).;8.6e-21 ; EC:3.5.2.7; HUTI_YERPE IMIDAZOLONEPROPIONASE (EC 3.5.2.7) (IMIDAZOLONE-5-PROPIONATE HYDROLASE).;5.7e-49 Amidohydro_1 // Amidohydrolase family;3.8e-49 d1k6wa2 // c.1.9.5 // Cytosine deaminase catalytic domain;8.12e-24 /// d1k1da1 // b.92.1.3 // D-hydantoinase;3.34e-12 6453624; (AL132997) putative hydrolase [Streptomyces coelicolor A3(2)];2e-94 ; 15595340; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 EC:3.5.4.2 // ADEC_METTH PROBABLE ADENINE DEAMINASE (EC 3.5.4.2) (ADENASE) (ADENINE AMINASE).;1.08e-30 /// EC:3.5.1.5 // UREA_SOYBN UREASE (EC 3.5.1.5) (UREA AMIDOHYDROLASE) (FRAGMENT).;2.72e-08 /// EC:3.5.2.7 // HUTI_YERPE IMIDAZOLONEPROPIONASE (EC 3.5.2.7) (IMIDAZOLONE-5-PROPIONATE HYDROLASE).;1.46e-60 AE004452 51% similar to hydroxyatrazine hydrolase AtzB [Pseudomonas sp. ADP]. Putative enzymes Class 4 PA0143_at probable nucleoside hydrolase PA0143 IU_nuc_hydro Pseudomonas PA0143 PA0143 /DEF=probable nucleoside hydrolase /FUNCTION=Nucleotide biosynthesis and metabolism 3.2.2.1 EC:3.2.2.1; IUNH_CRIFA INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE (EC 3.2.2.1) (IU-NUCLEOSIDE HYDROLASE) (PURINE NUCLEOSIDASE).;2.2e-94 IU_nuc_hydro // Inosine-uridine preferring nucleoside hydrolase;4.4e-110 d1ezra_ // c.70.1.1 // Nucleoside hydrolase;5.48e-103 15595341; (NC_002516) probable nucleoside hydrolase [Pseudomonas aeruginosa];0.0 ; 15964168; (NC_003047) PUTATIVE NUCLEOSIDE HYDROLASE PROTEIN [Sinorhizobium meliloti];8e-90 numtm:1;Nin-prob:0.87404;Type:SIGNAL;Span:TM from 13 to 35: Eval:0.35887 EC:3.2.2.1 // IUNH_CRIFA INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE (EC 3.2.2.1) (IU-NUCLEOSIDE HYDROLASE) (PURINE NUCLEOSIDASE).;6.56e-105 AE004452 60% similar to hypothetical protein YeiK [Escherichia coli]. Nucleotide biosynthesis and metabolism Class 3 PA0144_at hypothetical protein PA0144 Pseudomonas PA0144 "PA0144 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" Nuc_deoxyrib_tr // Nucleoside 2-deoxyribosyltransferase;1.5e-74 d1f8ya_ // c.23.14.1 // Nucleoside 2-deoxyribosyltransferase;4.05e-12 15595342; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-115 ; 15595343; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];4e-64 numtm:1;Nin-prob:0.96371;Type:SIGNAL;Span:TM from 13 to 35: Eval:0.54544 AE004452 "Hypothetical, unclassified, unknown" Class 4 PA0145_i_at hypothetical protein PA0145 Pseudomonas PA0145 "PA0145 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" Nuc_deoxyrib_tr // Nucleoside 2-deoxyribosyltransferase;3.1e-73 d1f8ya_ // c.23.14.1 // Nucleoside 2-deoxyribosyltransferase;1.79e-11 15595342; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-64 ; 15595343; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-97 AE004452 "Hypothetical, unclassified, unknown" Class 4 PA0146_at conserved hypothetical protein PA0146 Bmp Pseudomonas PA0146 "PA0146 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 8289 // lipid binding // extended:Unknown; Bmp; 8.4e-48 Bmp // Basic membrane protein;8.4e-48 15595344; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 4581460; (X97478) ORF2 [Rhodobacter capsulatus];e-105 numtm:1;Nin-prob:0.86862;Type:SIGNAL;Span:TM from 12 to 31: Eval:0.68113 AE004452 63% similar to predicted coding region AF0890 [Archaeoglobus fulgidus]. "Hypothetical, unclassified, unknown" Class 4 PA0147_at probable oxidoreductase PA0147 2OG-FeII_Oxy Pseudomonas PA0147 PA0147 /DEF=probable oxidoreductase /FUNCTION=Putative enzymes 1.14.11.9 "EC:1.14.11.9; FL3H_VITVI NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE (EC 1.14.11.9) (FLAVONONE- 3-HYDROXYLASE) (F3H) (FHT).;1.1e-80 ; EC:1.14.11.11; HY6H_HYONI HYOSCYAMINE 6-DIOXYGENASE (EC 1.14.11.11) (HYOSCYAMINE 6-BETA- HYDROXYLASE).;7e-78" 2OG-FeII_Oxy // 2OG-Fe(II) oxygenase superfamily;4e-33 d1qjea_ // b.82.2.1 // Isopenicillin N synthase;1.49e-96 "15219523; (NM_103217) hyoscyamine 6-dioxygenase hydroxylase, putative [Arabidopsis thaliana];9e-55 ; 15595345; (NC_002516) probable oxidoreductase [Pseudomonas aeruginosa];0.0" EC:1.14.11.11 // HY6H_HYONI HYOSCYAMINE 6-DIOXYGENASE (EC 1.14.11.11) (HYOSCYAMINE 6-BETA- HYDROXYLASE).;2.3e-90 AE004452 45% similar to isopenicillin N synthase [Flavobacterium sp.]. Putative enzymes 90174998 Class 3 PA0148_at probable adenosine deaminase PA0148 A_deaminase Pseudomonas PA0148 PA0148 /DEF=probable adenosine deaminase /FUNCTION=Nucleotide biosynthesis and metabolism 19239 // deaminase activity // extended:Unknown; A_deaminase; 3.8e-71 3.5.4.4 EC:3.5.4.4; ADA_HUMAN ADENOSINE DEAMINASE (EC 3.5.4.4) (ADENOSINE AMINOHYDROLASE).;8.6e-91 A_deaminase // Adenosine/AMP deaminase;3.8e-71 d1a4ma_ // c.1.9.1 // Adenosine deaminase (ADA);2.17e-100 16127410; (NC_002696) adenosine deaminase [Caulobacter crescentus CB15];e-100 ; 15595346; (NC_002516) probable adenosine deaminase [Pseudomonas aeruginosa];0.0 EC:3.5.4.4 // ADA_HUMAN ADENOSINE DEAMINASE (EC 3.5.4.4) (ADENOSINE AMINOHYDROLASE).;6.35e-99 AE004453 46% similar to adenosine deaminase [Escherichia coli]; 62% similar to adenosine deaminase (putative) [Saccharomyces cerevisiae] Nucleotide biosynthesis and metabolism 91152042 Class 3 PA0149_at "probable sigma-70 factor, ECF subfamily" PA0149 Pseudomonas PA0149 "PA0149 /DEF=probable sigma-70 factor, ECF subfamily /FUNCTION=Transcriptional regulators" "sigma70_r4 // Sigma-70, region 4;3.7e-15 /// sigma70_r2 // Sigma-70 region 2;3.9e-12" "15598606; (NC_002516) probable sigma-70 factor, ECF subfamily [Pseudomonas aeruginosa];1e-19 ; 15595347; (NC_002516) probable sigma-70 factor, ECF subfamily [Pseudomonas aeruginosa];1e-99" AE004453 48% similar to regulatory protein PvdS [Pseudomonas aeruginosa]. Transcriptional regulators Class 3 PA0150_at probable transmembrane sensor PA0150 Pseudomonas PA0150 PA0150 /DEF=probable transmembrane sensor /FUNCTION=Membrane proteins; Transcriptional regulators FecR // FecR protein;1.3e-153 15598605; (NC_002516) probable transmembrane sensor [Pseudomonas aeruginosa];3e-40 ; 15595348; (NC_002516) probable transmembrane sensor [Pseudomonas aeruginosa];0.0 AE004453 45% similar to regulatory protein PupR [Pseudomonas putida]. Membrane proteins; Transcriptional regulators Class 3 PA0151_at probable TonB-dependent receptor PA0151 TonB_boxC Pseudomonas PA0151 PA0151 /DEF=probable TonB-dependent receptor /FUNCTION=Transport of small molecules 4872 // receptor activity // extended:inferred from electronic annotation; TonB_dep_Rec; 6e-93 TonB_dep_Rec // TonB dependent receptor;6e-93 d1by5a_ // f.4.3.3 // Ferric hydroxamate uptake receptor FhuA;1.02e-158 15595349; (NC_002516) probable TonB-dependent receptor [Pseudomonas aeruginosa];0.0 ; 15803576; (NC_002655) putative iron compound receptor [Escherichia coli O157:H7 EDL933];e-170 AE004453 43% similar to ferric-pseudobactin receptor PupB [Pseudomonas putida]. Transport of small molecules Class 3 PA0152_pcaQ_at transcriptional regulator PcaQ PA0152 LysR_substrate Pseudomonas PA0152 PA0152 /GENE=pcaQ /DEF=transcriptional regulator PcaQ /FUNCTION=Carbon compound catabolism; Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 2.5e-05 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;2.5e-05 /// LysR_substrate // LysR substrate binding domain;2.1e-37" "d1i6aa_ // c.94.1.1 // Hydrogen peroxide-inducible genes activator OxyR, regulatory domain;1.9e-36" 15595350; (NC_002516) transcriptional regulator PcaQ [Pseudomonas aeruginosa];e-152 ; 10442737; (AF302797) PcaQ [Pseudomonas sp. IMT40] [Pseudomonas indica];e-108 AE004453 56% similar to regulatory protein PcaQ [Agrobacterium tumefaciens]. Aromatic compound catabolism Carbon compound catabolism; Transcriptional regulators 95325324 Class 2 PA0153_pcaH_at "protocatechuate 3,4-dioxygenase, beta subunit" PA0153 Dioxygenase Pseudomonas PA0153 "PA0153 /GENE=pcaH /DEF=protocatechuate 3,4-dioxygenase, beta subunit /FUNCTION=Carbon compound catabolism" "3824 // catalytic activity // extended:Unknown; Dioxygenase; 1e-73 /// 18578 // protocatechuate 3,4-dioxygenase activity // extended:Unknown; 1.13.11.3; 2.14e-80" 1.13.11.3 "EC:1.13.11.3; PCXB_PSEPU PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (EC 1.13.11.3) (3,4-PCD).;1.2e-80" Dioxygenase // Dioxygenase;1e-73 "d3pccm_ // b.3.6.1 // Protocatechuate-3,4-dioxygenase, beta chain;7.46e-79" "15595351; (NC_002516) protocatechuate 3,4-dioxygenase, beta subunit [Pseudomonas aeruginosa];e-144 ; 10442738; (AF302797) protocatechuate 3,4 dioxygenase beta subunit [Pseudomonas sp. IMT40] [Pseudomonas indica];e-124" "EC:1.13.11.3 // PCXB_PSEPU PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (EC 1.13.11.3) (3,4-PCD).;2.14e-80" AE004453 "90% similar to protocatechuate 3,4-dioxygenase, beta subunit [Pseudomonas putida]." Aromatic compound catabolism Carbon compound catabolism Class 2 PA0154_pcaG_at "protocatechuate 3,4-dioxygenase, alpha subunit" PA0154 Dioxygenase Pseudomonas PA0154 "PA0154 /GENE=pcaG /DEF=protocatechuate 3,4-dioxygenase, alpha subunit /FUNCTION=Carbon compound catabolism" 3824 // catalytic activity // extended:Unknown; Dioxygenase; 8.8e-10 1.13.11.3 "EC:1.13.11.3; PCXB_PSEPU PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (EC 1.13.11.3) (3,4-PCD).;2e-51" Dioxygenase // Dioxygenase;8.8e-10 "d3pcca_ // b.3.6.1 // Protocatechuate-3,4-dioxygenase, alpha chain;1.4e-62" "15595352; (NC_002516) protocatechuate 3,4-dioxygenase, alpha subunit [Pseudomonas aeruginosa];e-117 ; 10442739; (AF302797) protocatechuate 3,4 dioxygenase alpha subunit [Pseudomonas sp. IMT40] [Pseudomonas indica];4e-94" "EC:1.13.11.3 // PCXB_PSEPU PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (EC 1.13.11.3) (3,4-PCD).;8.08e-53" AE004453 "87% similar to protocatechuate 3,4-dioxygenase, alpha subunit [Pseudomonas putida]" Aromatic compound catabolism Carbon compound catabolism Class 2 PA0155_pcaR_at transcriptional regulator PcaR PA0155 IclR Pseudomonas PA0155 PA0155 /GENE=pcaR /DEF=transcriptional regulator PcaR /FUNCTION=Carbon compound catabolism; Transcriptional regulators 3677 // DNA binding // extended:inferred from electronic annotation; IclR; 1.2e-74 IclR // Bacterial transcriptional regulator;1.2e-74 "d1jmra2 // d.110.2.2 // Thanscriptional regulator IclR, C-terminal domain;1.19e-44" 15595353; (NC_002516) transcriptional regulator PcaR [Pseudomonas aeruginosa];e-156 ; 6093656; PCA REGULON REGULATORY PROTEIN;e-119 AE004453 88% similar to regulatory protein PcaR [Pseudomonas putida]. Aromatic compound catabolism Carbon compound catabolism; Transcriptional regulators Class 2 PA0156_at probable RND efflux membrane fusion protein precursor PA0156 HlyD Pseudomonas PA0156 PA0156 /DEF=probable RND efflux membrane fusion protein precursor /FUNCTION=Transport of small molecules 8565 // protein transporter activity // extended:inferred from electronic annotation; HlyD; 4.1e-09 HlyD // HlyD family secretion protein;4.1e-09 15595354; (NC_002516) probable RND efflux membrane fusion protein precursor [Pseudomonas aeruginosa];0.0 ; 13474602; (NC_002678) RND efflux membrane fusion protein [Mesorhizobium loti];2e-85 AE004453 45% similar to acriflavine resistance protein AcrE [Escherichia coli]. Transport of small molecules Class 3 PA0157_at probable RND efflux membrane fusion protein precursor PA0157 HlyD Pseudomonas PA0157 PA0157 /DEF=probable RND efflux membrane fusion protein precursor /FUNCTION=Transport of small molecules 13474601; (NC_002678) RND efflux membrane fusion protein [Mesorhizobium loti];7e-72 ; 15595355; (NC_002516) probable RND efflux membrane fusion protein precursor [Pseudomonas aeruginosa];0.0 AE004453 47% similar to membrane-fusion protein IfeA [Agrobacterium tumefaciens]. Transport of small molecules Class 3 PA0158_at probable RND efflux transporter PA0158 ACR_tran Pseudomonas PA0158 PA0158 /DEF=probable RND efflux transporter /FUNCTION=Membrane proteins; Transport of small molecules ACR_tran // AcrB/AcrD/AcrF family;4e-82 13474600; (NC_002678) RND efflux transporter [Mesorhizobium loti];0.0 ; 15595356; (NC_002516) probable RND efflux transporter [Pseudomonas aeruginosa];0.0 numtm:11;Nin-prob:0.01178;Type: ;Span:TM from 15 to 37: Eval:0.88637/TM from 336 to 358: Eval:0.41383/TM from 362 to 379: Eval:0.96606/TM from 392 to 414: Eval:0.76318/TM from 434 to 456: Eval:0.48876/TM from 468 to 490: Eval:0.38379/TM from 524 to 541: Eval:0.80811/TM from 882 to 901: Eval:0.91988/TM from 906 to 928: Eval:0.86407/TM from 956 to 978: Eval:0.48171/TM from 983 to 1005: Eval:0.87020 AE004453 45% similar to putative cation efflux system protein [Helicobacter pylori]. Membrane proteins; Transport of small molecules Class 3 PA0159_at probable transcriptional regulator PA0159 LysR_substrate Pseudomonas PA0159 PA0159 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 5.5e-19 "LysR_substrate // LysR substrate binding domain;2.6e-49 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;5.5e-19" 15599090; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];4e-83 ; 15595357; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-177 AE004454 52% similar to regulator GstR [Bradyrhizobium japonicum]. Transcriptional regulators Class 3 PA0160_at hypothetical protein PA0160 Pseudomonas PA0160 "PA0160 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15596944; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-06 ; 15595358; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];6e-26 numtm:1;Nin-prob:0.83592;Type:SIGNAL;Span:TM from 5 to 24: Eval:0.81465 AE004454 "Hypothetical, unclassified, unknown" Class 4 PA0161_at hypothetical protein PA0161 Pseudomonas PA0161 "PA0161 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595359; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-24 AE004454 "Hypothetical, unclassified, unknown" Class 4 PA0162_at probable porin PA0162 Peptidase_S43 Pseudomonas PA0162 PA0162 /DEF=probable porin /FUNCTION=Membrane proteins; Transport of small molecules 15288 // porin activity // extended:Unknown; OprD; 2.6e-84 "OprD // outer membrane porin, OprD family;2.6e-84" 15595360; (NC_002516) probable porin [Pseudomonas aeruginosa];0.0 ; 15597616; (NC_002516) probable porin [Pseudomonas aeruginosa];e-114 AE004454 58% similar to porin OprD precursor [Pseudomonas aeruginosa]. Membrane proteins; Transport of small molecules Class 3 PA0163_at probable transcriptional regulator PA0163 HTH_AraC Pseudomonas PA0163 PA0163 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators "6355 // regulation of transcription, DNA-dependent // extended:Unknown; AraC_binding; 0.0001" "HTH_AraC // Bacterial regulatory helix-turn-helix proteins, araC family;5.4e-10 /// AraC_binding // AraC-like ligand binding domain;0.0001" 15596432; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];2e-53 ; 15595361; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-152 AE004454 52% similar to putative regulatory protein YeaM [Escherichia coli]. Transcriptional regulators Class 3 PA0164_at probable gamma-glutamyltranspeptidase PA0164 G_glu_transpept Pseudomonas PA0164 PA0164 /DEF=probable gamma-glutamyltranspeptidase /FUNCTION=Amino acid biosynthesis and metabolism 3840 // gamma-glutamyl transferase activity // extended:inferred from electronic annotation; G_glu_transpept; 4.7e-230 2.3.2.2 EC:2.3.2.2; GGT5_HUMAN GAMMA-GLUTAMYLTRANSPEPTIDASE 5 PRECURSOR (EC 2.3.2.2) (GAMMA- GLUTAMYLTRANSFERASE 5) (GGT-REL).;1.1e-145 G_glu_transpept // Gamma-glutamyltranspeptidase;4.7e-230 15613430; (NC_002570) cephalosporin acylase [Bacillus halodurans];0.0 ; 15595362; (NC_002516) probable gamma-glutamyltranspeptidase [Pseudomonas aeruginosa];0.0 EC:2.3.2.2 // GGT5_HUMAN GAMMA-GLUTAMYLTRANSPEPTIDASE 5 PRECURSOR (EC 2.3.2.2) (GAMMA- GLUTAMYLTRANSFERASE 5) (GGT-REL).;1.47e-175 AE004454 63% similar to putative gamma-glutamyltranspeptidase [Mycobacterium tuberculosis]; 48% similar to cephalosporin acylase [Pseudomonas sp.] Glutathione metabolism Amino acid biosynthesis and metabolism Class 3 PA0165_at hypothetical protein PA0165 Pseudomonas PA0165 "PA0165 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595363; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-169 ; 13937484; (U66917) hypothetical protein [Pseudomonas sp. ADP];3e-96 AE004454 46% similar to region of outer membrane protein Tsx [Salmonella typhimurium]. "Hypothetical, unclassified, unknown" Class 4 PA0166_at probable transporter PA0166 xan_ur_permease Pseudomonas PA0166 PA0166 /DEF=probable transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; xan_ur_permease; 4.7e-108 xan_ur_permease // Permease family;4.7e-108 15595364; (NC_002516) probable transporter [Pseudomonas aeruginosa];0.0 ; 15642706; (NC_002505) xanthine/uracil permease family protein [Vibrio cholerae];e-122 numtm:12;Nin-prob:0.78761;Type: ;Span:TM from 21 to 40: Eval:0.93296/TM from 55 to 72: Eval:0.71113/TM from 79 to 101: Eval:0.97297/TM from 116 to 138: Eval:0.80525/TM from 145 to 167: Eval:0.53090/TM from 178 to 197: Eval:0.88976/TM from 204 to 226: Eval:0.79969/TM from 246 to 268: Eval:0.46760/TM from 335 to 357: Eval:0.53074/TM from 362 to 384: Eval:0.87110/TM from 391 to 413: Eval:0.71352/TM from 423 to 442: Eval:0.75443 AE004454 67% similar to putative transport protein YicE [Escherichia coli]. Membrane proteins; Transport of small molecules Class 3 PA0167_at probable transcriptional regulator PA0167 tetR Pseudomonas PA0167 PA0167 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; tetR; 1.9e-15 "tetR // Bacterial regulatory proteins, tetR family;1.9e-15" "d2tct_1 // a.4.1.9 // Tetracyclin repressor (Tet-repressor, TetR);1.28e-12" 15596701; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];2e-40 ; 15595365; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-127 AE004454 60% similar to putative regulator YcdC [Escherichia coli]. Transcriptional regulators Class 3 PA0168_at conserved hypothetical protein PA0168 UPF0029 Pseudomonas PA0168 "PA0168 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" UPF0029 // Uncharacterized protein family UPF0029;5e-50 15964218; (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti];3e-53 ; 15595366; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-110 AE004454 51% similar to hypothetical protein YigZ [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0169_at hypothetical protein PA0169 GGDEF Pseudomonas PA0169 "PA0169 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" GGDEF // GGDEF domain;2.2e-59 15595367; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-130 ; 15076965; (AF285783) unknown [Myxococcus xanthus];1e-33 AE004454 63% similar to a region of hypothetical protein [Aquifex aeolicus]. "Hypothetical, unclassified, unknown" Class 4 PA0170_at hypothetical protein PA0170 Pseudomonas PA0170 "PA0170 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595368; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-70 AE004455 "Hypothetical, unclassified, unknown" Class 4 PA0171_at hypothetical protein PA0171 Pseudomonas PA0171 "PA0171 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595369; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-97 AE004455 "Hypothetical, unclassified, unknown" Class 4 PA0172_at hypothetical protein PA0172 HAMP Pseudomonas PA0172 "PA0172 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 4871 // signal transducer activity // extended:inferred from electronic annotation; HAMP; 1.2e-17 HAMP // HAMP domain;1.2e-17 16264180; (NC_003078) putative regulatory protein [Sinorhizobium meliloti];2e-22 ; 15595370; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:2;Nin-prob:0.44185;Type:SIGNAL;Span:TM from 12 to 31: Eval:0.85826/TM from 312 to 334: Eval:0.93399 AE004455 45% similar to a region of hypothetical protein [Synechocystis sp.]. "Hypothetical, unclassified, unknown" Class 4 PA0173_at 3.1.1.61 probable methylesterase PA0173 response_reg Pseudomonas PA0173 "PA0173 /DEF=probable methylesterase /FUNCTION=Adaptation, protection; Chemotaxis" 156 // two-component response regulator activity // extended:inferred from electronic annotation; response_reg; 3e-25 3.1.1.61 EC:3.1.1.61; Y415_BORBU PROBABLE PROTEIN-GLUTAMATE METHYLESTERASE BB0415 (EC 3.1.1.61).;1.1e-96 CheB_methylest // CheB methylesterase;3.3e-103 /// response_reg // Response regulator receiver domain;3e-25 "d1chd__ // c.40.1.1 // Methylesterase CheB, C-terminal domain;1.79e-70" "15595371; (NC_002516) probable methylesterase [Pseudomonas aeruginosa];0.0 ; 16765259; (NC_003197) methyl esterase, response regulator for chemotaxis (cheA sensor) [Salmonella typhimurium LT2];e-114" EC:3.1.1.61 // Y415_BORBU PROBABLE PROTEIN-GLUTAMATE METHYLESTERASE BB0415 (EC 3.1.1.61).;8.85e-109 AE004455 76% similar to response regulator (CheB) for chemotaxis protein [Escherichia coli] Chemotactic transducer (MCP); Chemotaxis "Adaptation, protection; Chemotaxis" 88165060 Class 3 PA0174_at conserved hypothetical protein PA0174 CheD Pseudomonas PA0174 "PA0174 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" CheD // CheD;2.2e-70 "15601839; (NC_002506) chemotaxis protein CheD, putative [Vibrio cholerae];4e-29 ; 15595372; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-112" AE004455 62% similar to conserved hypothetical protein [Borrelia burgdorferi] Chemotaxis "Hypothetical, unclassified, unknown" 95349401 Class 4 PA0175_at 2.1.1.80 probable chemotaxis protein methyltransferase PA0175 CheR_N Pseudomonas PA0175 "PA0175 /DEF=probable chemotaxis protein methyltransferase /FUNCTION=Adaptation, protection; Chemotaxis; Transcriptional regulators" 8757 // S-adenosylmethionine-dependent methyltransferase activity // extended:Unknown; CheR_N; 2.8e-19 2.1.1.80 EC:2.1.1.80; FRZF_MYXXA PROTEIN METHYLTRANSFERASE FRZF (EC 2.1.1.80).;5.7e-84 "CheR // CheR methyltransferase, SAM binding domain;5.8e-72 /// CheR_N // CheR methyltransferase, all-alpha domain;2.8e-19" "d1af7_1 // a.58.1.1 // Chemotaxis receptor methyltransferase CheR, N-terminal domain;2.86e-18 /// d1af7_2 // c.66.1.8 // Chemotaxis receptor methyltransferase CheR, C-terminal domain;1.42e-62" 15595373; (NC_002516) probable chemotaxis protein methyltransferase [Pseudomonas aeruginosa];e-160 EC:2.1.1.80 // FRZF_MYXXA PROTEIN METHYLTRANSFERASE FRZF (EC 2.1.1.80).;1.44e-73 AE004455 68% similar to methyltransferase CheR [Salmonella typhimurium] Chemotaxis; Two-component System "Adaptation, protection; Chemotaxis; Transcriptional regulators" Class 3 PA0176_at probable chemotaxis transducer PA0176 MCPsignal Pseudomonas PA0176 "PA0176 /DEF=probable chemotaxis transducer /FUNCTION=Adaptation, protection; Chemotaxis" 4871 // signal transducer activity // extended:inferred from electronic annotation; MCPsignal; 3e-109 MCPsignal // Methyl-accepting chemotaxis protein (MCP) signaling domain;3e-109 15601841; (NC_002506) methyl-accepting chemotaxis protein [Vibrio cholerae];e-118 ; 15595374; (NC_002516) probable chemotaxis transducer [Pseudomonas aeruginosa];0.0 AE004455 "72% similar to C terminus of methyl-accepting chemotaxis protein (MCP1)I, serine sensor receptor [Escherichia coli]" Chemotactic transducer (MCP); Chemotaxis "Adaptation, protection; Chemotaxis" 91236753 Class 3 PA0177_at probable purine-binding chemotaxis protein PA0177 CheW Pseudomonas PA0177 "PA0177 /DEF=probable purine-binding chemotaxis protein /FUNCTION=Adaptation, protection; Chemotaxis" 4871 // signal transducer activity // extended:inferred from electronic annotation; CheW; 1e-52 CheW // CheW-like domain;1e-52 d1k0sa_ // b.40.7.1 // Chemotaxis protein CheW;3.02e-39 15595375; (NC_002516) probable purine-binding chemotaxis protein [Pseudomonas aeruginosa];3e-85 ; 1916348; (U92493) chemotaxis protein [Burkholderia pseudomallei];2e-52 AE004455 78% similar to Chemotaxis protein CheW [Escherichia coli] Chemotaxis "Adaptation, protection; Chemotaxis" 91296802 Class 3 PA0178_at 2.7.3.- probable two-component sensor PA0178 H-kinase_dim Pseudomonas PA0178 "PA0178 /DEF=probable two-component sensor /FUNCTION=Adaptation, protection; Chemotaxis; Two-component regulatory systems" "CheW // CheW-like domain;7e-23 /// Hpt // Hpt domain;3.3e-35 /// HATPase_c // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;2.2e-27 /// H-kinase_dim // Signal transducing histidine kinase, homodimeric domain;7.1e-27" d1i5na_ // a.24.10.3 // Chemotaxis protein CheA P1 domain;1.23e-35 /// d1i58a_ // d.122.1.3 // Histidine kinase CheA;4.58e-38 /// d1k0sa_ // b.40.7.1 // Chemotaxis protein CheW;2.78e-20 "16765263; (NC_003197) sensory histitine protein kinase, transduces signal between chemo- signal receptors and CheB and CheY [Salmonella typhimurium LT2];e-151 ; 15595376; (NC_002516) probable two-component sensor [Pseudomonas aeruginosa];0.0" AE004455 60% similar to chemotaxis protein cheA [Salmonella typhimurium] Chemotaxis; Two-component System "Adaptation, protection; Chemotaxis; Two-component regulatory systems" 88144445 Class 3 PA0179_at probable two-component response regulator PA0179 response_reg Pseudomonas PA0179 "PA0179 /DEF=probable two-component response regulator /FUNCTION=Adaptation, protection; Chemotaxis; Two-component regulatory systems" 156 // two-component response regulator activity // extended:inferred from electronic annotation; response_reg; 1.5e-33 response_reg // Response regulator receiver domain;1.5e-33 d1tmy__ // c.23.1.1 // CheY protein;1.27e-31 15595377; (NC_002516) probable two-component response regulator [Pseudomonas aeruginosa];5e-63 ; 11277553; chemotaxis response regulator cheYIII [imported] - Rhodobacter sphaeroides;7e-31 AE004455 69% similar to chemotaxis response regulator [Rhodobacter sphaeroides]; 65% similar to CheY1 [Rhizobium meliloti]; 61% similar to cheY peptide [Escherichia coli] Chemotaxis; Two-component System "Adaptation, protection; Chemotaxis; Two-component regulatory systems" 96312364 Class 3 PA0180_at probable chemotaxis transducer PA0180 MCPsignal Pseudomonas PA0180 "PA0180 /DEF=probable chemotaxis transducer /FUNCTION=Adaptation, protection; Chemotaxis" 4871 // signal transducer activity // extended:inferred from electronic annotation; MCPsignal; 3.2e-07 MCPsignal // Methyl-accepting chemotaxis protein (MCP) signaling domain;3.2e-07 15601838; (NC_002506) methyl-accepting chemotaxis protein [Vibrio cholerae];7e-31 ; 15595378; (NC_002516) probable chemotaxis transducer [Pseudomonas aeruginosa];0.0 numtm:1;Nin-prob:0.50763;Type:SIGNAL;Span:TM from 35 to 57: Eval:0.63935 AE004456 43% similar to C-terminus of aerotaxis sensor receptor [Escherichia coli] Chemotactic transducer (MCP); Chemotaxis "Adaptation, protection; Chemotaxis" 97334134 Class 3 PA0181_at probable transcriptional regulator PA0181 HTH_1 Pseudomonas PA0181 PA0181 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 4.1e-20 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;4.1e-20 /// LysR_substrate // LysR substrate binding domain;1.1e-43" 15595379; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-179 ; 16119407; (NC_003064) AGR_pAT_256p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];2e-89 AE004456 48% similar to putative transcriptional regulator YeaT [Escherichia coli]. Transcriptional regulators Class 3 PA0182_at probable short-chain dehydrogenase PA0182 adh_short Pseudomonas PA0182 PA0182 /DEF=probable short-chain dehydrogenase /FUNCTION=Putative enzymes 16491 // oxidoreductase activity // extended:Unknown; adh_short; 1.3e-77 1.1.1.146 "EC:1.1.1.146; DHI2_HUMAN CORTICOSTEROID 11-BETA-DEHYDROGENASE, ISOZYME 2 (EC 1.1.1.146) (11- DH2) (11-BETA-HYDROXYSTEROID DEHYDROGENASE 2) (11-BETA-HSD2) (NAD- DEPENDENT 11-BETA-HYDROXYSTEROID DEHYDROGENASE).;2.8e-74 ; EC:1.1.1.233; DHMA_FLAS1 N-ACYLMANNOSAMINE 1-DEHYDROGENASE (EC 1.1.1.233) (NAM-DH).;5.4e-66 ; EC:1.3.1.34; DECR_HUMAN 2,4-DIENOYL-COA REDUCTASE, MITOCHONDRIAL PRECURSOR (EC 1.3.1.34) (2,4- DIENOYL-COA REDUCTASE [NADPH]) (4-ENOYL-COA REDUCTASE [NADPH]).;3e-71 ; EC:1.3.1.19; TODD_PSEPU CIS-TOLUENE DIHYDRODIOL DEHYDROGENASE (EC 1.3.1.19).;3.7e-65 ; EC:1.6.99.7; DHPR_HUMAN DIHYDROPTERIDINE REDUCTASE (EC 1.6.99.7) (HDHPR) (QUINOID DIHYDROPTERIDINE REDUCTASE).;3.2e-61" adh_short // short chain dehydrogenase;1.3e-77 d1i01a_ // c.2.1.2 // beta-keto acyl carrier protein reductase;3.35e-63 13470745; (NC_002678) probable short-chain dehydrogenase [Mesorhizobium loti];2e-73 ; 15595380; (NC_002516) probable short-chain dehydrogenase [Pseudomonas aeruginosa];e-133 EC:1.1.1.233 // DHMA_FLAS1 N-ACYLMANNOSAMINE 1-DEHYDROGENASE (EC 1.1.1.233) (NAM-DH).;7.94e-71 /// EC:1.3.1.19 // TODD_PSEPU CIS-TOLUENE DIHYDRODIOL DEHYDROGENASE (EC 1.3.1.19).;1.71e-68 /// EC:1.6.99.7 // DHPR_HUMAN DIHYDROPTERIDINE REDUCTASE (EC 1.6.99.7) (HDHPR) (QUINOID DIHYDROPTERIDINE REDUCTASE).;5.36e-58 AE004456 64% similar to putative oxidoreductase YjgI [Escherichia coli]. Putative enzymes Class 3 PA0183_atsA_at arylsulfatase PA0183 Sulfatase Pseudomonas PA0183 PA0183 /GENE=atsA /DEF=arylsulfatase /FUNCTION=Carbon compound catabolism; Central intermediary metabolism 8484 // sulfuric ester hydrolase activity // extended:inferred from electronic annotation; Sulfatase; 2.7e-96 3.1.6.4 EC:3.1.6.4; GA6S_HUMAN N-ACETYLGALACTOSAMINE-6-SULFATASE PRECURSOR (EC 3.1.6.4) (N- ACETYLGALACTOSAMINE-6-SULFATE SULFATASE) (GALACTOSE-6-SULFATE SULFATASE) (GALNAC6S SULFATASE) (CHONDROITINSULFATASE) (CHONDROITINASE).;1.4e-101 Sulfatase // Sulfatase;2.7e-96 d1hdha_ // c.76.1.2 // Arylsulfatase B (4-sulfatase);1.48e-161 7465474; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa;0.0 ; 15595381; (NC_002516) arylsulfatase [Pseudomonas aeruginosa];0.0 EC:3.1.6.12 // ARSB_HUMAN ARYLSULFATASE B PRECURSOR (EC 3.1.6.12) (ASB) (N-ACETYLGALACTOSAMINE- 4-SULFATASE) (G4S).;4.58e-122 AE004456 95% similar to arylsulfatase [Pseudomonas aeruginosa]. Aromatic compound catabolism Carbon compound catabolism; Central intermediary metabolism Class 1 PA0184_at probable ATP-binding component of ABC transporter PA0184 ABC_tran Pseudomonas PA0184 PA0184 /DEF=probable ATP-binding component of ABC transporter /FUNCTION=Transport of small molecules 4009 // ATP-binding cassette (ABC) transporter activity // extended:inferred from electronic annotation; ABC_tran; 5.1e-63 ABC_tran // ABC transporter;5.1e-63 "d1g2912 // c.37.1.12 // Maltose transport protein MalK, N-terminal domain;6.27e-63" "2440149; (Z48540) ABC-type transporter, putative ATP-binding component [Pseudomonas aeruginosa];e-147 ; 15595382; (NC_002516) probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa];e-157" AE004456 "95% similar to putative transporter, ATP-binding component AtsC [Pseudomonas aeruginosa]." Transport of small molecules Class 3 PA0185_at probable permease of ABC transporter PA0185 BPD_transp Pseudomonas PA0185 PA0185 /DEF=probable permease of ABC transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 8.4e-18 BPD_transp // Binding-protein-dependent transport system inner membrane component;8.4e-40 "2440148; (Z48540) ABC-type transporter, putative membrane subunit [Pseudomonas aeruginosa];0.0 ; 15595383; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];0.0" numtm:10;Nin-prob:0.85877;Type: ;Span:TM from 34 to 51: Eval:0.93486/TM from 92 to 111: Eval:0.87057/TM from 118 to 140: Eval:0.92388/TM from 150 to 169: Eval:0.72129/TM from 189 to 211: Eval:0.90042/TM from 240 to 259: Eval:0.90751/TM from 351 to 373: Eval:0.55136/TM from 383 to 405: Eval:0.74400/TM from 454 to 476: Eval:0.76037/TM from 506 to 525: Eval:0.55458 AE004456 "89% similar to putative ABC-type transporter, membrane subunit AtsB [Pseudomonas aeruginosa]." Membrane proteins; Transport of small molecules Class 3 PA0186_at probable binding protein component of ABC transporter PA0186 Pseudomonas PA0186 PA0186 /DEF=probable binding protein component of ABC transporter /FUNCTION=Transport of small molecules 15595384; (NC_002516) probable binding protein component of ABC transporter [Pseudomonas aeruginosa];0.0 ; 4884720; (AF126201) AtsR [Pseudomonas putida];e-106 numtm:1;Nin-prob:0.9671;Type:SIGNAL;Span:TM from 7 to 29: Eval:0.58442 "EC:4.1.1.55 // PHTD_COMTE 4,5-DIHYDROXYPHTHALATE DECARBOXYLASE (EC 4.1.1.55) (DHP DECARBOXYLASE).;5.58e-33" AE004456 100% similar to putative sulfate ester binding protein atsR [Pseudomonas aeruginosa]. Transport of small molecules Class 3 PA0187_at hypothetical protein PA0187 Pseudomonas PA0187 "PA0187 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1ds1a_ // b.82.2.2 // Clavaminate synthase;1.48e-52 15595385; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-152 ; 13471462; (NC_002678) gamma-butyrobetaine hydroxylase [Mesorhizobium loti];7e-09 "EC:1.14.11.1 // BODG_HUMAN GAMMA-BUTYROBETAINE,2-OXOGLUTARATE DIOXYGENASE (EC 1.14.11.1) (GAMMA-BUTYROBETAINE HYDROXYLASE) (GAMMA-BBH).;1.04e-56" AE004456 "Hypothetical, unclassified, unknown" Class 4 PA0188_at hypothetical protein PA0188 Pseudomonas PA0188 "PA0188 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" Auxin_eff // Auxin Efflux Carrier;1e-08 15595386; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-162 ; 15596932; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];5e-45 numtm:7;Nin-prob:0.35434;Type: ;Span:TM from 5 to 22: Eval:0.93607/TM from 34 to 51: Eval:0.64290/TM from 61 to 83: Eval:0.59101/TM from 119 to 141: Eval:0.80671/TM from 180 to 202: Eval:0.81384/TM from 222 to 244: Eval:0.82739/TM from 265 to 287: Eval:0.95334 AE004456 44% similar to hypothetical protein MTH1382 [Methanobacterium thermoautotrophicum]. "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0189_at probable porin PA0189 Peptidase_S43 Pseudomonas PA0189 PA0189 /DEF=probable porin /FUNCTION=Membrane proteins; Transport of small molecules 15288 // porin activity // extended:Unknown; OprD; 1.2e-61 "OprD // outer membrane porin, OprD family;1.2e-61" 15596155; (NC_002516) outer membrane porin protein OprD precursor [Pseudomonas aeruginosa];1e-90 ; 15595387; (NC_002516) probable porin [Pseudomonas aeruginosa];0.0 AE004456 55% similar to porin OprD precursor [Pseudomonas aeruginosa]. Membrane proteins; Transport of small molecules Class 3 PA0190_at probable acid phosphatase PA0190 PAP2 Pseudomonas PA0190 PA0190 /DEF=probable acid phosphatase /FUNCTION=Putative enzymes 3.1.3.27 EC:3.1.3.27; PGPB_HAEIN PHOSPHATIDYLGLYCEROPHOSPHATASE B (EC 3.1.3.27).;9.8e-13 PAP2 // PAP2 superfamily;0.00057 d1d2ta_ // a.111.1.1 // Acid phosphatase;1.04e-42 13472416; (NC_002678) probable acid phosphatase [Mesorhizobium loti];3e-32 ; 15595388; (NC_002516) probable acid phosphatase [Pseudomonas aeruginosa];e-137 EC:3.1.3.27 // PGPB_HAEIN PHOSPHATIDYLGLYCEROPHOSPHATASE B (EC 3.1.3.27).;1.36e-16 AE004457 42% similar to acid phosphatase PhoC [Morganella morganii]. Putative enzymes Class 3 PA0191_at probable transcriptional regulator PA0191 HTH_1 Pseudomonas PA0191 PA0191 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 7.2e-31 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;7.2e-31 /// LysR_substrate // LysR substrate binding domain;7.6e-38" 15597530; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];2e-85 ; 15595389; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-173 AE004457 59% similar to transcriptional control factor SdsB [Pseudomonas sp.]. Transcriptional regulators Class 3 PA0192_at probable TonB-dependent receptor PA0192 TonB_boxC Pseudomonas PA0192 PA0192 /DEF=probable TonB-dependent receptor /FUNCTION=Membrane proteins; Transport of small molecules 4872 // receptor activity // extended:inferred from electronic annotation; TonB_dep_Rec; 1.3e-68 TonB_dep_Rec // TonB dependent receptor;1.3e-68 d1by5a_ // f.4.3.3 // Ferric hydroxamate uptake receptor FhuA;7.65e-134 15597531; (NC_002516) probable TonB-dependent receptor [Pseudomonas aeruginosa];0.0 ; 15595390; (NC_002516) probable TonB-dependent receptor [Pseudomonas aeruginosa];0.0 AE004457 39% similar to pesticin receptor precursor FyuA [Yersinia enterocolitica]. Membrane proteins; Transport of small molecules Class 3 PA0193_at hypothetical protein PA0193 TauD Pseudomonas PA0193 "PA0193 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Putative enzymes" 16491 // oxidoreductase activity // extended:Unknown; TauD; 2.4e-90 "TauD // Taurine catabolism dioxygenase TauD, TfdA family;2.4e-90" d1gy9a_ // b.82.2.5 // Taurine/alpha-ketoglutarate dioxygenase;3.4e-87 4884719; (AF126201) putative alkylsulfatase [Pseudomonas putida];e-139 ; 15595391; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-173 AE004457 53% similar to taurine dioxygenase TauD [Escherichia coli]. "Hypothetical, unclassified, unknown; Putative enzymes" Class 4 PA0194_at hypothetical protein PA0194 TauD Pseudomonas PA0194 "PA0194 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Putative enzymes" 16491 // oxidoreductase activity // extended:Unknown; TauD; 6.5e-21 "TauD // Taurine catabolism dioxygenase TauD, TfdA family;6.5e-21" d1gy9a_ // b.82.2.5 // Taurine/alpha-ketoglutarate dioxygenase;1.37e-79 15595392; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-174 ; 15597506; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-41 AE004457 45% similar to taurine dioxygenase TauD [Escherichia coli]. "Hypothetical, unclassified, unknown; Putative enzymes" Class 4 PA0195_pntA_at still frameshift pyridine nucleotide transhydrogenase alpha subunit PA0195 Pseudomonas PA0195 PA0195 /GENE=pntA /DEF=still frameshift pyridine nucleotide transhydrogenase alpha subunit /FUNCTION=Energy metabolism; Transport of small molecules "AlaDh_PNT_N // Alanine dehydrogenase/PNT, N-terminal domain;1.7e-50 /// AlaDh_PNT_C // Alanine dehydrogenase/PNT, C-terminal domain;1.1e-80" d1f8ga2 // c.23.12.2 // Nicotinamide nucleotide transhydrogenase dI component;4.2e-55 /// d1f8ga1 // c.2.1.4 // Nicotinamide nucleotide transhydrogenase dI component;1.75e-59 numtm:3;Nin-prob:0.04105;Type: ;Span:TM from 399 to 421: Eval:0.96457/TM from 434 to 456: Eval:0.58517/TM from 461 to 480: Eval:0.94776 "EC:1.6.1.1 // NNTM_HUMAN NAD(P) TRANSHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.6.1.2) (PYRIDINE NUCLEOTIDE TRANSHYDROGENASE) (NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE).;2.91e-181 /// EC:1.4.1.1 // DHA_MYCTU ALANINE DEHYDROGENASE (EC 1.4.1.1) (40 KDA ANTIGEN) (TB43).;8.76e-110 /// EC:1.5.1.7 // LYS1_YEAST SACCHAROPINE DEHYDROGENASE [NAD+, L-LYSINE FORMING] (EC 1.5.1.7) (LYSINE--2-OXOGLUTARATE REDUCTASE) (SDH).;5.91e-100" AE004457 61% similar to NAD(P)(+) transhydrogenase subunit alpha [Escherichia coli]. Energy metabolism; Transport of small molecules Class 2 PA0196_pntB_at 1.6.1.1 "pyridine nucleotide transhydrogenase, beta subunit" PA0196 PNTB Pseudomonas PA0196 "PA0196 /GENE=pntB /DEF=pyridine nucleotide transhydrogenase, beta subunit /FUNCTION=Energy metabolism; Transport of small molecules" 8746 // NAD(P)+ transhydrogenase activity // extended:Unknown; PNTB; 3.3e-264 1.6.1.1 "EC:1.6.1.1; NNTM_HUMAN NAD(P) TRANSHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.6.1.2) (PYRIDINE NUCLEOTIDE TRANSHYDROGENASE) (NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE).;7.6e-155" PNTB // NAD(P) transhydrogenase beta subunit;3.3e-264 d1hzzc_ // c.31.1.4 // Transhydrogenase domain III (dIII);2.3e-79 "15595393; (NC_002516) pyridine nucleotide transhydrogenase, beta subunit [Pseudomonas aeruginosa];0.0 ; 16127533; (NC_002696) NAD(P) transhydrogenase, beta subunit [Caulobacter crescentus CB15];e-158" numtm:8;Nin-prob:0.23936;Type: ;Span:TM from 4 to 26: Eval:0.30700/TM from 33 to 55: Eval:0.45147/TM from 59 to 81: Eval:0.72589/TM from 93 to 115: Eval:0.45862/TM from 137 to 159: Eval:0.39291/TM from 179 to 198: Eval:0.58624/TM from 203 to 225: Eval:0.48722/TM from 246 to 268: Eval:0.86150 "EC:1.6.1.1 // NNTM_HUMAN NAD(P) TRANSHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.6.1.2) (PYRIDINE NUCLEOTIDE TRANSHYDROGENASE) (NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE).;3.73e-186" AE004457 "69% similar to pyridine nucleotide transhydrogenase, beta subunit [Escherichia coli]." Nicotinate and nicotinamide metabolism Energy metabolism; Transport of small molecules 86274751 Class 2 PA0197_at hypothetical protein PA0197 TonB Pseudomonas PA0197 PA0197 /DEF=hypothetical protein /FUNCTION=Transport of small molecules 5381 // iron ion transporter activity // extended:Unknown; TonB; 4.1e-14 TonB // Gram-negative bacterial tonB protein;4.1e-14 d1ihra_ // d.212.1.2 // TonB;1.32e-16 3916253; (AF087669) TonB [Bordetella bronchiseptica];1e-27 ; 15595394; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-162 numtm:1;Nin-prob:0.79106;Type: ;Span:TM from 52 to 69: Eval:0.68231 AE004458 43% similar to a region of TonB [Pseudomonas aeruginosa]. Transport of small molecules 96262716 Class 4 PA0198_exbB1_at transport protein ExbB PA0198 MotA_ExbB Pseudomonas PA0198 PA0198 /GENE=exbB1 /DEF=transport protein ExbB /FUNCTION=Transport of small molecules 8565 // protein transporter activity // extended:inferred from electronic annotation; MotA_ExbB; 4.5e-44 MotA_ExbB // MotA/TolQ/ExbB proton channel family;4.5e-44 3916254; (AF087669) ExbB [Bordetella bronchiseptica];7e-35 ; 15595395; (NC_002516) transport protein ExbB [Pseudomonas aeruginosa];e-130 numtm:3;Nin-prob:2e-05;Type: ;Span:TM from 15 to 37: Eval:0.37623/TM from 121 to 143: Eval:0.63544/TM from 168 to 190: Eval:0.52223 AE004458 55% similar to ExbB [Xanthomonas campestris]. Transport of small molecules 89359155 Class 2 PA0199_exbD1_at transport protein ExbD PA0199 ExbD Pseudomonas PA0199 PA0199 /GENE=exbD1 /DEF=transport protein ExbD /FUNCTION=Transport of small molecules 5215 // transporter activity // extended:traceable author statement; ExbD; 6.8e-24 ExbD // Biopolymer transport protein ExbD/TolR;6.8e-24 15595396; (NC_002516) transport protein ExbD [Pseudomonas aeruginosa];6e-67 ; 16127462; (NC_002696) ExbD/TolR family protein [Caulobacter crescentus CB15];5e-23 numtm:1;Nin-prob:0.12877;Type: ;Span:TM from 20 to 42: Eval:0.44735 AE004458 60% similar to inner-membrane protein ExbD [Pseudomonas putida]. Transport of small molecules 93172953 Class 2 PA0200_i_at hypothetical protein PA0200 Pseudomonas PA0200 "PA0200 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595397; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-39 AE004458 "Hypothetical, unclassified, unknown" Class 4 PA0201_at hypothetical protein PA0201 Pseudomonas PA0201 "PA0201 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1cvl__ // c.69.1.18 // Lipase;4.23e-09 16126424; (NC_002696) conserved hypothetical protein [Caulobacter crescentus CB15];9e-42 ; 15595398; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-112 AE004458 49% similar to hypothetical protein [Clostridium beijerinckii]. "Hypothetical, unclassified, unknown" Class 4 PA0202_at probable amidase PA0202 Amidase Pseudomonas PA0202 PA0202 /DEF=probable amidase /FUNCTION=Putative enzymes 4040 // amidase activity // extended:inferred from electronic annotation; Amidase; 1.9e-83 3.5.2.12 EC:3.5.2.12; NYLA_PSES8 6-AMINOHEXANOATE-CYCLIC-DIMER HYDROLASE (EC 3.5.2.12) (NYLON OLIGOMERS DEGRADING ENZYME EI).;9.4e-98 ; EC:3.5.1.4; YJ54_ARCFU PUTATIVE AMIDASE AF1954 (EC 3.5.1.4).;7.9e-100 Amidase // Amidase;1.9e-83 d1gr8a_ // c.117.1.1 // Malonamidase E2;1.2e-109 15595399; (NC_002516) probable amidase [Pseudomonas aeruginosa];0.0 ; 15599538; (NC_002516) probable amidase [Pseudomonas aeruginosa];0.0 EC:3.5.2.12 // NYLA_PSES8 6-AMINOHEXANOATE-CYCLIC-DIMER HYDROLASE (EC 3.5.2.12) (NYLON OLIGOMERS DEGRADING ENZYME EI).;8.97e-129 /// EC:3.5.1.4 // YJ54_ARCFU PUTATIVE AMIDASE AF1954 (EC 3.5.1.4).;9.06e-121 AE004458 47% similar to enantiomerase-selective amidase [Rhodococcus sp.]. Putative enzymes Class 3 PA0203_at probable binding protein component of ABC transporter PA0203 SBP_bac_1 Pseudomonas PA0203 PA0203 /DEF=probable binding protein component of ABC transporter /FUNCTION=Transport of small molecules 5215 // transporter activity // extended:traceable author statement; SBP_bac_1; 2.1e-08 SBP_bac_1 // Bacterial extracellular solute-binding protein;2.1e-08 d1pot__ // c.94.1.1 // Spermidine/putrescine-binding protein PotD;2.62e-80 15595520; (NC_002516) probable binding protein component of ABC transporter [Pseudomonas aeruginosa];4e-74 ; 15595400; (NC_002516) probable binding protein component of ABC transporter [Pseudomonas aeruginosa];0.0 AE004458 52% similar to spermidine/putrescine periplasmic transport protein PotD [Escherichia coli]. Transport of small molecules Class 3 PA0204_at probable permease of ABC transporter PA0204 BPD_transp Pseudomonas PA0204 PA0204 /DEF=probable permease of ABC transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 7.9e-08 BPD_transp // Binding-protein-dependent transport system inner membrane component;7.9e-08 15595521; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];8e-76 ; 15595401; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];e-148 numtm:7;Nin-prob:0.15747;Type: ;Span:TM from 20 to 42: Eval:0.79936/TM from 73 to 95: Eval:0.91539/TM from 110 to 132: Eval:0.83657/TM from 139 to 161: Eval:0.34181/TM from 189 to 208: Eval:0.92468/TM from 213 to 235: Eval:0.84337/TM from 245 to 264: Eval:0.92274 AE004458 62% similar to putrescine transport system permease protein PotI [Escherichia coli]. Membrane proteins; Transport of small molecules Class 3 PA0205_at probable permease of ABC transporter PA0205 BPD_transp Pseudomonas PA0205 PA0205 /DEF=probable permease of ABC transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 7.5e-14 BPD_transp // Binding-protein-dependent transport system inner membrane component;7.5e-14 15595522; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];1e-86 ; 15595402; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];e-171 numtm:6;Nin-prob:0.99777;Type: ;Span:TM from 20 to 42: Eval:0.88213/TM from 91 to 113: Eval:0.67971/TM from 122 to 144: Eval:0.47446/TM from 173 to 195: Eval:0.56050/TM from 228 to 250: Eval:0.51306/TM from 273 to 295: Eval:0.64634 AE004458 60% similar to spermidine/putrescine transport system permease PotB [Escherichia coli]. Membrane proteins; Transport of small molecules Class 3 PA0206_at probable ATP-binding component of ABC transporter PA0206 ABC_tran Pseudomonas PA0206 PA0206 /DEF=probable ATP-binding component of ABC transporter /FUNCTION=Transport of small molecules 4009 // ATP-binding cassette (ABC) transporter activity // extended:inferred from electronic annotation; ABC_tran; 3.6e-65 ABC_tran // ABC transporter;3.6e-65 /// TOBE // TOBE domain;8.1e-15 "d1g2912 // c.37.1.12 // Maltose transport protein MalK, N-terminal domain;1.85e-73" "15595403; (NC_002516) probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa];0.0 ; 13472556; (NC_002678) ABC transporter, ATP-binding component [Mesorhizobium loti];e-102" AE004458 62% similar to ATP-binding component of spermidine/putrescine transport PotA [Escherichia coli]. Transport of small molecules Class 3 PA0207_at probable transcriptional regulator PA0207 LysR_substrate Pseudomonas PA0207 PA0207 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 3.9e-28 "LysR_substrate // LysR substrate binding domain;2.5e-29 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;3.9e-28" 15803330; (NC_002655) positive regulator of gcv operon [Escherichia coli O157:H7 EDL933];1e-33 ; 15595404; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-171 AE004458 51% similar to glycine cleavage activator protein GcvA [Escherichia coli]. Transcriptional regulators Class 3 PA0208_mdcA_at malonate decarboxylase alpha subunit PA0208 Pseudomonas PA0208 PA0208 /GENE=mdcA /DEF=malonate decarboxylase alpha subunit /FUNCTION=Carbon compound catabolism d1k6da_ // c.63.1.2 // Acetate CoA-transferase alpha;1.82e-16 15595405; (NC_002516) malonate decarboxylase alpha subunit [Pseudomonas aeruginosa];0.0 ; 4062973; (AB017138) alpha subunit of malonate decarboxylase [Pseudomonas putida];0.0 EC:2.8.3.8 // ATOD_HAEIN ACETATE COA-TRANSFERASE ALPHA SUBUNIT (EC 2.8.3.8) (ACETYL- COA:ACETOACETATE COA TRANSFERASE ALPHA SUBUNIT).;2.96e-19 AE004459 85% similar to malonate decarboxylase alpha subunit MdcA [Klebsiella pneumoniae]. Carbon compound catabolism Class 2 PA0209_at conserved hypothetical protein PA0209 CitG Pseudomonas PA0209 PA0209 /DEF=conserved hypothetical protein /FUNCTION=Putative enzymes CitG // ATP:dephospho-CoA triphosphoribosyl transferase;1.6e-57 14285593; Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase);6e-98 ; 15595406; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-165 AE004459 65% similar to MdcB [Klebsiella pneumoniae]. Putative enzymes Class 4 PA0210_mdcC_at malonate decarboxylase delta subunit PA0210 Pseudomonas PA0210 PA0210 /GENE=mdcC /DEF=malonate decarboxylase delta subunit /FUNCTION=Carbon compound catabolism 15595407; (NC_002516) malonate decarboxylase delta subunit [Pseudomonas aeruginosa];1e-50 ; 4062975; (AB017138) delta subunit of malonate decarboxylase [Pseudomonas putida];2e-33 AE004459 65% similar to malonate decarboxylase delta subunit MdcC [Klebsiella pneumoniae] Carbon compound catabolism Class 2 PA0211_mdcD_at malonate decarboxylase beta subunit PA0211 Pseudomonas PA0211 PA0211 /GENE=mdcD /DEF=malonate decarboxylase beta subunit /FUNCTION=Carbon compound catabolism 4062976; (AB017138) beta subunit of malonate decarboxylase [Pseudomonas putida];e-109 ; 15595408; (NC_002516) malonate decarboxylase beta subunit [Pseudomonas aeruginosa];e-160 AE004459 83% similar to malonate decarboxylase beta subunit MdcD [Klebsiella pneumoniae]. Carbon compound catabolism Class 2 PA0212_mdcE_at malonate decarboxylase gamma subunit PA0212 Pseudomonas PA0212 PA0212 /GENE=mdcE /DEF=malonate decarboxylase gamma subunit /FUNCTION=Carbon compound catabolism 15595409; (NC_002516) malonate decarboxylase gamma subunit [Pseudomonas aeruginosa];e-150 ; 4062977; (AB017138) gamma subunit of malonate decarboxylase [Pseudomonas putida];e-100 AE004459 70% similar to malonate decarboxylase gamma subunit MdcE [Klebsiella pneumoniae]. Carbon compound catabolism Class 2 PA0213_at hypothetical protein PA0213 Pseudomonas PA0213 PA0213 /DEF=hypothetical protein /FUNCTION=Carbon compound catabolism 15595410; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-133 ; 4062978; (AB017138) holo-acyl carrier protein [Pseudomonas putida];5e-47 AE004459 51% similar to putative malonate decarboxylase component MdcG [Klebsiella pneumoniae]. Carbon compound catabolism Class 4 PA0214_at probable acyl transferase PA0214 Acyl_transf Pseudomonas PA0214 PA0214 /DEF=probable acyl transferase /FUNCTION=Carbon compound catabolism 16740 // transferase activity // extended:Unknown; Acyl_transf; 1e-32 Acyl_transf // Acyl transferase domain;1e-32 d1mla_2 // d.58.23.1 // Probable ACP-binding domain of malonyl-CoA ACP transacylase;3.32e-08 15595411; (NC_002516) probable acyl transferase [Pseudomonas aeruginosa];e-172 ; 4062979; (AB017138) epsilon subunit of malonate decarboxylase [Pseudomonas putida];2e-95 AE004459 73% similar to putative malonate decarboxylase transacylase component MdcH [Klebsiella pneumoniae]. Carbon compound catabolism Class 3 PA0215_at probable transporter PA0215 MadL Pseudomonas PA0215 PA0215 /DEF=probable transporter /FUNCTION=Membrane proteins; Transport of small molecules MadL // Malonate transporter MadL subunit;4.3e-92 4062980; (AB017138) malonate transporter [Pseudomonas putida];3e-33 ; 15595412; (NC_002516) probable transporter [Pseudomonas aeruginosa];2e-68 numtm:4;Nin-prob:0.9975;Type: ;Span:TM from 7 to 29: Eval:0.76450/TM from 33 to 50: Eval:0.98681/TM from 63 to 80: Eval:0.97774/TM from 90 to 112: Eval:0.78576 AE004459 71% similar to putative malonate transporter MadL [Malonomonas rubra]. Membrane proteins; Transport of small molecules Class 3 PA0216_at probable transporter PA0216 MadM Pseudomonas PA0216 PA0216 /DEF=probable transporter /FUNCTION=Membrane proteins; Transport of small molecules MadM // Malonate/sodium symporter MadM subunit;6.9e-43 15595413; (NC_002516) probable transporter [Pseudomonas aeruginosa];e-138 ; 2062657; (U87980) MadM [Malonomonas rubra];5e-90 numtm:8;Nin-prob:0.04488;Type: ;Span:TM from 10 to 32: Eval:0.82378/TM from 39 to 61: Eval:0.80246/TM from 76 to 98: Eval:0.43161/TM from 105 to 127: Eval:0.91017/TM from 137 to 159: Eval:0.60882/TM from 164 to 186: Eval:0.93639/TM from 196 to 218: Eval:0.30037/TM from 225 to 247: Eval:0.58797 AE004459 81% similar to putative malonate transporter MadM [Malonomonas rubra]. Membrane proteins; Transport of small molecules Class 3 PA0217_at probable transcriptional regulator PA0217 HTH_1 Pseudomonas PA0217 PA0217 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 3.8e-14 "LysR_substrate // LysR substrate binding domain;1.9e-38 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;3.8e-14" "d1i6aa_ // c.94.1.1 // Hydrogen peroxide-inducible genes activator OxyR, regulatory domain;8.01e-35" 2240019; (U95087) MdcR [Klebsiella pneumoniae];3e-69 ; 15595414; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-172 AE004459 65% similar to malonate decarboxylase operon regulator MdcR [Klebsiella pneumoniae]. Transcriptional regulators Class 3 PA0218_at probable transcriptional regulator PA0218 HTH_1 Pseudomonas PA0218 PA0218 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 2.4e-24 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;2.4e-24 /// LysR_substrate // LysR substrate binding domain;2.4e-51" "d1i6aa_ // c.94.1.1 // Hydrogen peroxide-inducible genes activator OxyR, regulatory domain;2.91e-42" 13476190; (NC_002678) transcriptional regulator [Mesorhizobium loti];2e-45 ; 15595415; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-175 AE004459 49% similar to putative transcriptional regulator YvbU [Bacillus subtilis]. Transcriptional regulators Class 3 PA0219_at probable aldehyde dehydrogenase PA0219 aldedh Pseudomonas PA0219 PA0219 /DEF=probable aldehyde dehydrogenase /FUNCTION=Putative enzymes 4029 // aldehyde dehydrogenase (NAD+) activity // extended:Unknown; 1.2.1.3; 3.41e-174 /// 16491 // oxidoreductase activity // extended:Unknown; aldedh; 7.9e-211 1.2.1.3 "EC:1.2.1.3; DHAM_HUMAN ALDEHYDE DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.2.1.3) (ALDH CLASS 2) (ALDHI) (ALDH-E2).;2.1e-169 ; EC:1.5.1.6; FTDH_HUMAN 10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE (EC 1.5.1.6) (10-FTHFDH).;4.8e-196" aldedh // Aldehyde dehydrogenase family;7.9e-211 "d1cw3a_ // c.82.1.1 // Aldehyde reductase (dehydrogenase), ALDH;5.03e-170" 15595416; (NC_002516) probable aldehyde dehydrogenase [Pseudomonas aeruginosa];0.0 ; 15600505; (NC_002516) probable aldehyde dehydrogenase [Pseudomonas aeruginosa];e-158 "EC:1.5.99.8 // PUTA_SALTY BIFUNCTIONAL PUTA PROTEIN [INCLUDES: PROLINE DEHYDROGENASE (EC 1.5.99.8) (PROLINE OXIDASE) DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE (EC 1.5.1.12) (P5C DEHYDROGENASE)].;1.48e-197 /// EC:1.5.1.6 // FTDH_HUMAN 10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE (EC 1.5.1.6) (10-FTHFDH).;1.42e-188 /// EC:1.2.1.3 // DHAM_HUMAN ALDEHYDE DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.2.1.3) (ALDH CLASS 2) (ALDHI) (ALDH-E2).;3.41e-174" AE004460 68% similar to aldehyde dehydrogenase AldH [Escherichia coli]. Putative enzymes Class 3 PA0220_at probable amino acid permease PA0220 aa_permeases Pseudomonas PA0220 PA0220 /DEF=probable amino acid permease /FUNCTION=Transport of small molecules 6810 // transport // extended:inferred from electronic annotation; aa_permeases; 4.7e-08 aa_permeases // Amino acid permease;4.7e-08 15599267; (NC_002516) probable amino acid permease [Pseudomonas aeruginosa];9e-57 ; 15595417; (NC_002516) probable amino acid permease [Pseudomonas aeruginosa];0.0 numtm:12;Nin-prob:0.99602;Type: ;Span:TM from 13 to 35: Eval:0.69133/TM from 45 to 67: Eval:0.57632/TM from 88 to 110: Eval:0.34007/TM from 125 to 147: Eval:0.80350/TM from 152 to 174: Eval:0.95576/TM from 189 to 211: Eval:0.88921/TM from 232 to 254: Eval:0.76972/TM from 277 to 299: Eval:0.83439/TM from 329 to 346: Eval:0.92634/TM from 356 to 378: Eval:0.62270/TM from 390 to 412: Eval:0.72797/TM from 422 to 441: Eval:0.73654 AE004460 43% similar to phenylalanine-specific transport system permease PheP[Escherichia coli]. Transport of small molecules Class 3 PA0221_at probable aminotransferase PA0221 aminotran_3 Pseudomonas PA0221 PA0221 /DEF=probable aminotransferase /FUNCTION=Putative enzymes 8483 // transaminase activity // extended:Unknown; aminotran_3; 2.2e-96 2.6.1.18 "EC:2.6.1.18; OAPT_PSEPU OMEGA-AMINO ACID--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.18) (OMEGA-APT) (BETA-ALANINE--PYRUVATE AMINOTRANSFERASE).;1.2e-109 ; EC:4.1.1.64; DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;1.9e-109 ; EC:5.4.3.8; GSA_XANCH GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE (EC 5.4.3.8) (GSA) (GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE) (GSA-AT).;4.1e-102" aminotran_3 // Aminotransferase class-III;2.2e-96 "d1qj5a_ // c.67.1.4 // Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA;4.55e-122" 15595418; (NC_002516) probable aminotransferase [Pseudomonas aeruginosa];0.0 ; 15595496; (NC_002516) probable aminotransferase [Pseudomonas aeruginosa];e-144 "EC:2.6.1.18 // OAPT_PSEPU OMEGA-AMINO ACID--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.18) (OMEGA-APT) (BETA-ALANINE--PYRUVATE AMINOTRANSFERASE).;2.46e-126 /// EC:4.1.99.1 // TNAA_PROVU TRYPTOPHANASE (EC 4.1.99.1) (L-TRYPTOPHAN INDOLE-LYASE) (TNASE).;2.79e-58 /// EC:4.1.1.64 // DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;9.75e-124" AE004460 54% similar to putative aminotransferase Y4uB [Rhizobium sp. NGR234]. Putative enzymes Class 3 PA0222_at hypothetical protein PA0222 SBP_bac_1 Pseudomonas PA0222 "PA0222 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 5215 // transporter activity // extended:traceable author statement; SBP_bac_1; 0.00056 SBP_bac_1 // Bacterial extracellular solute-binding protein;0.00056 d1mrp__ // c.94.1.1 // Ferric-binding protein;5.41e-37 15595801; (NC_002516) probable binding protein component of ABC transporter [Pseudomonas aeruginosa];e-123 ; 15595419; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004460 50% similar to putative mannopine-binding periplasmic protein MotA [Agrobacterium tumefaciens]. "Hypothetical, unclassified, unknown" Class 4 PA0223_at probable dihydrodipicolinate synthetase PA0223 DHDPS Pseudomonas PA0223 PA0223 /DEF=probable dihydrodipicolinate synthetase /FUNCTION=Amino acid biosynthesis and metabolism; Cell wall / LPS / capsule 4.2.1.52 EC:4.2.1.52; DAPA_TOBAC DIHYDRODIPICOLINATE SYNTHASE PRECURSOR (EC 4.2.1.52) (DHDPS).;1.2e-74 ; EC:4.1.3.3; NPL_HAEIN PROBABLE N-ACETYLNEURAMINATE LYASE SUBUNIT (EC 4.1.3.3) (N- ACETYLNEURAMINIC ACID ALDOLASE) (N-ACETYLNEURAMINATE PYRUVATE LYASE) (NALASE).;7.3e-72 ; EC:4.2.1.41; KDGD_PSEPU 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE (EC 4.2.1.41) (5-KETO-4-DEOXY- GLUCARATE DEHYDRATASE) (KDGDH).;1.5e-71 DHDPS // Dihydrodipicolinate synthetase family;3e-46 d1nal1_ // c.1.10.1 // N-acetylneuraminate lyase;2.14e-88 15595420; (NC_002516) probable dihydrodipicolinate synthetase [Pseudomonas aeruginosa];e-167 ; 14331082; (AJ314791) hypothetical protein [Vibrio sp. CH-291];6e-85 EC:4.1.3.3 // NPL_HAEIN PROBABLE N-ACETYLNEURAMINATE LYASE SUBUNIT (EC 4.1.3.3) (N- ACETYLNEURAMINIC ACID ALDOLASE) (N-ACETYLNEURAMINATE PYRUVATE LYASE) (NALASE).;2.14e-88 /// EC:4.2.1.41 // KDGD_PSEPU 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE (EC 4.2.1.41) (5-KETO-4-DEOXY- GLUCARATE DEHYDRATASE) (KDGDH).;6.46e-89 AE004460 55% similar to putative dihydrodipicolinate synthase [Archaeoglobus fulgidus]. Amino acid biosynthesis and metabolism; Cell wall / LPS / capsule Class 3 PA0224_at probable aldolase PA0224 Aldolase_II Pseudomonas PA0224 PA0224 /DEF=probable aldolase /FUNCTION=Putative enzymes 4.1.2.17 EC:4.1.2.17; FUCA_HAEIN L-FUCULOSE PHOSPHATE ALDOLASE (EC 4.1.2.17) (L-FUCULOSE-1-PHOSPHATE ALDOLASE).;7.9e-42 ; EC:5.1.3.4; ARAD_SALTY L-RIBULOSE-5-PHOSPHATE 4-EPIMERASE (EC 5.1.3.4).;7.3e-39 Aldolase_II // Class II Aldolase and Adducin N-terminal domain;7.6e-60 d1e4bp_ // c.74.1.1 // L-fuculose-1-phosphate aldolase;1.52e-54 14331081; (AJ314791) hypothetical protein [Vibrio sp. CH-291];2e-88 ; 15595421; (NC_002516) probable aldolase [Pseudomonas aeruginosa];e-152 EC:4.1.2.17 // FUCA_HAEIN L-FUCULOSE PHOSPHATE ALDOLASE (EC 4.1.2.17) (L-FUCULOSE-1-PHOSPHATE ALDOLASE).;6.78e-56 /// EC:5.1.3.4 // ARAD_SALTY L-RIBULOSE-5-PHOSPHATE 4-EPIMERASE (EC 5.1.3.4).;1.4e-53 AE004460 48% similar to fuculose-1-phosphate aldolase FucA [Escherichia coli]. Putative enzymes Class 3 PA0225_at probable transcriptional regulator PA0225 HTH_3 Pseudomonas PA0225 PA0225 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3677 // DNA binding // extended:inferred from electronic annotation; HTH_3; 1.7e-17 HTH_3 // Helix-turn-helix;1.7e-17 "d1b0na2 // a.35.1.3 // SinR repressor, DNA-binding domain;1.59e-16" 15678686; (NC_000916) epoxidase [Methanothermobacter thermautotrophicus];1e-17 ; 15595422; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];2e-96 AE004460 51% similar to putative epoxidase [Methanobacterium thermoautotrophicum]. Transcriptional regulators Class 3 PA0226_at "probable CoA transferase, subunit A" PA0226 CoA_trans Pseudomonas PA0226 "PA0226 /DEF=probable CoA transferase, subunit A /FUNCTION=Carbon compound catabolism" 8410 // CoA-transferase activity // extended:inferred from electronic annotation; CoA_trans; 1.2e-14 2.8.3.8 EC:2.8.3.8; ATOD_HAEIN ACETATE COA-TRANSFERASE ALPHA SUBUNIT (EC 2.8.3.8) (ACETYL- COA:ACETOACETATE COA TRANSFERASE ALPHA SUBUNIT).;4e-21 CoA_trans // Coenzyme A transferase;1.2e-14 d1poia_ // c.63.1.2 // Glutaconate-CoA transferase alpha;9.77e-101 "15595423; (NC_002516) probable CoA transferase, subunit A [Pseudomonas aeruginosa];e-166 ; 16265247; (NC_003078) putative CoA-transferase subunit A protein [Sinorhizobium meliloti];e-111" EC:2.8.3.8 // ATOD_HAEIN ACETATE COA-TRANSFERASE ALPHA SUBUNIT (EC 2.8.3.8) (ACETYL- COA:ACETOACETATE COA TRANSFERASE ALPHA SUBUNIT).;1.02e-52 AE004460 51% similar to glutaconate CoA-transferase subunit A [Acidaminococcus fermentans]. Carbon compound catabolism Class 3 PA0227_at "probable CoA transferase, subunit B" PA0227 Pseudomonas PA0227 "PA0227 /DEF=probable CoA transferase, subunit B /FUNCTION=Carbon compound catabolism" 2.8.3.12 EC:2.8.3.12; GCTB_ACIFE GLUTACONATE COA-TRANSFERASE SUBUNIT B (EC 2.8.3.12) (GCT SMALL SUBUNIT).;3.6e-48 d1poib_ // c.63.1.3 // Glutaconate-CoA transferase beta;1.88e-80 "15595424; (NC_002516) probable CoA transferase, subunit B [Pseudomonas aeruginosa];e-146 ; 13473540; (NC_002678) acetoacetyl-CoA transferase b subunit [Mesorhizobium loti];9e-93" EC:2.8.3.12 // GCTB_ACIFE GLUTACONATE COA-TRANSFERASE SUBUNIT B (EC 2.8.3.12) (GCT SMALL SUBUNIT).;3.01e-84 AE004460 55% similar to glutaconate CoA-transferase subunit B [Acidaminococcus fermentans]. Carbon compound catabolism Class 3 PA0228_pcaF_at beta-ketoadipyl CoA thiolase PcaF PA0228 thiolase Pseudomonas PA0228 PA0228 /GENE=pcaF /DEF=beta-ketoadipyl CoA thiolase PcaF /FUNCTION=Carbon compound catabolism; Fatty acid and phospholipid metabolism 3988 // acetyl-CoA C-acyltransferase activity // extended:Unknown; 2.3.1.16; 3.24e-142 2.3.1.16 "EC:2.3.1.16; THIM_HUMAN 3-KETOACYL-COA THIOLASE, MITOCHONDRIAL (EC 2.3.1.16) (BETA- KETOTHIOLASE) (ACETYL-COA ACYLTRANSFERASE) (MITOCHONDRIAL 3-OXOACYL- COA THIOLASE) (T1).;4.2e-133" "thiolase_C // Thiolase, C-terminal domain;9.5e-61 /// thiolase // Thiolase, N-terminal domain;7.2e-110" d1qfla1 // c.95.1.1 // Biosynthetic thiolase;1.66e-92 6093653; Beta-ketoadipyl CoA thiolase;0.0 ; 15595425; (NC_002516) beta-ketoadipyl CoA thiolase PcaF [Pseudomonas aeruginosa];0.0 "EC:2.3.1.16 // THIM_HUMAN 3-KETOACYL-COA THIOLASE, MITOCHONDRIAL (EC 2.3.1.16) (BETA- KETOTHIOLASE) (ACETYL-COA ACYLTRANSFERASE) (MITOCHONDRIAL 3-OXOACYL- COA THIOLASE) (T1).;3.24e-142" AE004460 91% similar to PcaF [Pseudomonas putida]. Aromatic compound catabolism Carbon compound catabolism; Fatty acid and phospholipid metabolism Class 2 PA0229_pcaT_at dicarboxylic acid transporter PcaT PA0229 sugar_tr Pseudomonas PA0229 PA0229 /GENE=pcaT /DEF=dicarboxylic acid transporter PcaT /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; sugar_tr; 7.5e-76 sugar_tr // Sugar (and other) transporter;7.5e-76 15595426; (NC_002516) dicarboxylic acid transporter PcaT [Pseudomonas aeruginosa];0.0 ; 1206033; (U48776) dicarboxylic acid transport protein [Pseudomonas putida];0.0 numtm:12;Nin-prob:0.94847;Type: ;Span:TM from 21 to 43: Eval:0.70883/TM from 58 to 80: Eval:0.56452/TM from 93 to 115: Eval:0.43652/TM from 119 to 136: Eval:0.76613/TM from 156 to 178: Eval:0.89287/TM from 193 to 210: Eval:0.89195/TM from 240 to 262: Eval:0.79655/TM from 277 to 299: Eval:0.55774/TM from 306 to 324: Eval:0.89607/TM from 334 to 356: Eval:0.53397/TM from 368 to 390: Eval:0.83928/TM from 400 to 419: Eval:0.81165 AE004461 88% similar to dicarboxylic acid transport protein [Pseudomonas putida]; 83% similar to alpha-ketoglutarate permease KgtP [Escherichia coli]. Aromatic compound catabolism Membrane proteins; Transport of small molecules Class 2 PA0230_pcaB_at "3-carboxy-cis,cis-muconate cycloisomerase" PA0230 lyase_1 Pseudomonas PA0230 "PA0230 /GENE=pcaB /DEF=3-carboxy-cis,cis-muconate cycloisomerase /FUNCTION=Carbon compound catabolism" 3824 // catalytic activity // extended:Unknown; lyase_1; 1.2e-91 5.5.1.2 "EC:5.5.1.2; PCAB_PSEPU 3-CARBOXY-CIS,CIS-MUCONATE CYCLOISOMERASE (EC 5.5.1.2) (3-CARBOXYMUCONATE LACTONIZING ENZYME) (CMLE).;3.2e-106 ; EC:4.3.2.2; PUR8_HUMAN ADENYLOSUCCINATE LYASE (EC 4.3.2.2) (ADENYLOSUCCINASE) (ASL) (ASASE).;1.3e-116 ; EC:4.3.1.1; ASPA_SERMA ASPARTATE AMMONIA-LYASE (EC 4.3.1.1) (ASPARTASE).;6e-105" lyase_1 // Lyase;1.2e-91 d1f1oa_ // a.127.1.1 // Adenylosuccinate lyase;3.68e-104 "5091486; (AF031417) PcaB-like protein [Pseudomonas putida];0.0 ; 15595427; (NC_002516) 3-carboxy-cis,cis-muconate cycloisomerase [Pseudomonas aeruginosa];0.0" "EC:4.3.2.2 // PUR8_HUMAN ADENYLOSUCCINATE LYASE (EC 4.3.2.2) (ADENYLOSUCCINASE) (ASL) (ASASE).;5.08e-123 /// EC:4.2.1.2 // FUMH_HUMAN FUMARATE HYDRATASE, MITOCHONDRIAL PRECURSOR (EC 4.2.1.2) (FUMARASE).;6.77e-115 /// EC:5.5.1.2 // PCAB_PSEPU 3-CARBOXY-CIS,CIS-MUCONATE CYCLOISOMERASE (EC 5.5.1.2) (3-CARBOXYMUCONATE LACTONIZING ENZYME) (CMLE).;1.49e-111" AE004461 "87% similar to 3-carboxy-cis,cis-muconate cycloisomerase [Pseudomonas putida]." Aromatic compound catabolism Carbon compound catabolism Class 2 PA0231_pcaD_at beta-ketoadipate enol-lactone hydrolase PA0231 abhydrolase Pseudomonas PA0231 PA0231 /GENE=pcaD /DEF=beta-ketoadipate enol-lactone hydrolase /FUNCTION=Carbon compound catabolism 3.1.1.24 EC:3.1.1.24; ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;8.4e-62 ; EC:3.8.1.5; YM96_MYCTU PUTATIVE HALOALKANE DEHALOGENASE (EC 3.8.1.5).;6.8e-48 ; EC:1.11.1.10; PRXC_SYNY3 PUTATIVE NON-HEME CHLOROPEROXIDASE (EC 1.11.1.10) (CHLORIDE PEROXIDASE).;3.1e-51 abhydrolase // alpha/beta hydrolase fold;1.3e-23 d1a8q__ // c.69.1.12 // Bromoperoxidase A1;6.56e-56 15595428; (NC_002516) beta-ketoadipate enol-lactone hydrolase [Pseudomonas aeruginosa];e-148 ; 5091485; (AF031417) PcaD-like protein [Pseudomonas putida];3e-96 EC:3.8.1.5 // YM96_MYCTU PUTATIVE HALOALKANE DEHALOGENASE (EC 3.8.1.5).;5.35e-54 /// EC:2.3.1.31 // MET2_YEAST HOMOSERINE O-ACETYLTRANSFERASE (EC 2.3.1.31) (HOMOSERINE O-TRANS- ACETYLASE).;1.07e-49 /// EC:1.13.12.5 // LUCI_RENRE RENILLA-LUCIFERIN 2-MONOOXYGENASE (EC 1.13.12.5) (RENILLA-TYPE LUCIFERASE).;6.5e-37 /// EC:3.1.1.24 // ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;3.01e-63 /// EC:3.3.2.3 // HYES_HUMAN SOLUBLE EPOXIDE HYDROLASE (SEH) (EC 3.3.2.3) (EPOXIDE HYDRATASE) (CYTOSOLIC EPOXIDE HYDROLASE) (CEH).;5.59e-63 /// EC:1.11.1.10 // PRXC_SYNY3 PUTATIVE NON-HEME CHLOROPEROXIDASE (EC 1.11.1.10) (CHLORIDE PEROXIDASE).;5.19e-55 AE004461 63% similar to B-ketoadipate enol-lactone hydrolase [Bradyrhizobium japonicum]. Aromatic compound catabolism Carbon compound catabolism Class 2 PA0232_pcaC_at 4.1.1.44 gamma-carboxymuconolactone decarboxylase PA0232 CMD Pseudomonas PA0232 PA0232 /GENE=pcaC /DEF=gamma-carboxymuconolactone decarboxylase /FUNCTION=Carbon compound catabolism 3824 // catalytic activity // extended:Unknown; CMD; 2e-39 4.1.1.44 EC:4.1.1.44; DC4C_PSEPU 4-CARBOXYMUCONOLACTONE DECARBOXYLASE (EC 4.1.1.44) (CMD) (FRAGMENT).;7.7e-17 CMD // Carboxymuconolactone decarboxylase family;2e-39 5091484; (AF031417) PcaC-like protein [Pseudomonas putida];2e-63 ; 15595429; (NC_002516) gamma-carboxymuconolactone decarboxylase [Pseudomonas aeruginosa];2e-72 EC:4.1.1.44 // DC4C_PSEPU 4-CARBOXYMUCONOLACTONE DECARBOXYLASE (EC 4.1.1.44) (CMD) (FRAGMENT).;1.99e-15 AE004461 78% similar to gamma-carboxymuconolactone decarboxylase [Acinetobacter sp. ADP1]. Aromatic compound catabolism Carbon compound catabolism 73253931; 87250286 Class 2 PA0233_at probable transcriptional regulator PA0233 HTH_1 Pseudomonas PA0233 PA0233 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 8.9e-17 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;8.9e-17 /// LysR_substrate // LysR substrate binding domain;4e-44" d1al3__ // c.94.1.1 // Cofactor-binding fragment of CysB;2.47e-39 1439550; (U39409) ORF1; high similarity to members of the LysR family [Rhizobium leguminosarum bv. trifolii];1e-48 ; 15595430; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-174 AE004461 61% similar to putative transcriptional regulator [Rhizobium leguminosarum bv. trifolii]. Transcriptional regulators Class 3 PA0234_at hypothetical protein PA0234 Pseudomonas PA0234 "PA0234 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595431; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-167 ; 13937518; (U66917) hypothetical protein [Pseudomonas sp. ADP];7e-41 AE004461 "Hypothetical, unclassified, unknown" Class 4 PA0235_pcaK_at 4-hydroxybenzoate transporter PcaK PA0235 sugar_tr Pseudomonas PA0235 PA0235 /GENE=pcaK /DEF=4-hydroxybenzoate transporter PcaK /FUNCTION=Carbon compound catabolism; Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; sugar_tr; 1.8e-08 sugar_tr // Sugar (and other) transporter;1.8e-08 6093655; 4-hydroxybenzoate transporter;0.0 ; 15595432; (NC_002516) 4-hydroxybenzoate transporter PcaK [Pseudomonas aeruginosa];0.0 numtm:11;Nin-prob:0.93134;Type: ;Span:TM from 29 to 51: Eval:0.92760/TM from 66 to 88: Eval:0.77202/TM from 95 to 117: Eval:0.46690/TM from 121 to 143: Eval:0.62641/TM from 152 to 174: Eval:0.71682/TM from 179 to 201: Eval:0.96361/TM from 299 to 321: Eval:0.59172/TM from 333 to 355: Eval:0.69796/TM from 359 to 381: Eval:0.34421/TM from 394 to 416: Eval:0.65870/TM from 421 to 443: Eval:0.55228 AE004461 90% similar to 4-hydroxybenzoate transporter PcaK [Pseudomonas putida]. Aromatic compound catabolism Carbon compound catabolism; Membrane proteins; Transport of small molecules Class 2 PA0236_at probable transcriptional regulator PA0236 IclR Pseudomonas PA0236 PA0236 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3677 // DNA binding // extended:inferred from electronic annotation; IclR; 9.9e-27 IclR // Bacterial transcriptional regulator;9.9e-27 "d1jmra2 // d.110.2.2 // Thanscriptional regulator IclR, C-terminal domain;3.79e-32" 15595433; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-143 ; 15890389; (NC_003063) AGR_L_554p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];7e-36 AE004461 49% similar to repressor protein IclR [Escherichia coli]. Transcriptional regulators Class 3 PA0237_at probable oxidoreductase PA0237 GFO_IDH_MocA Pseudomonas PA0237 PA0237 /DEF=probable oxidoreductase /FUNCTION=Putative enzymes 16491 // oxidoreductase activity // extended:Unknown; GFO_IDH_MocA; 4.1e-28 1.1.99.28 EC:1.1.99.28; GFO_ZYMMO GLUCOSE--FRUCTOSE OXIDOREDUCTASE PRECURSOR (EC 1.1.99.28) (GFOR).;2.4e-67 ; EC:1.1.1.18; MI2D_RHIME MYO-INOSITOL 2-DEHYDROGENASE (EC 1.1.1.18).;2.1e-62 "GFO_IDH_MocA // Oxidoreductase family, NAD-binding Rossmann fold;4.1e-28 /// GFO_IDH_MocA_C // Oxidoreductase family, C-terminal alpha/beta domain;4.2e-08" "d1h6da2 // d.81.1.5 // Glucose-fructose oxidoreductase;6.17e-18 /// d1h6da1 // c.2.1.3 // Glucose-fructose oxidoreductase, N-terminal domain;1.34e-43" 3849801; (M77665) qutH [Emericella nidulans];1e-45 ; 15595434; (NC_002516) probable oxidoreductase [Pseudomonas aeruginosa];0.0 EC:1.1.99.28 // GFO_ZYMMO GLUCOSE--FRUCTOSE OXIDOREDUCTASE PRECURSOR (EC 1.1.99.28) (GFOR).;2.57e-75 /// EC:1.1.1.18 // MI2D_RHIME MYO-INOSITOL 2-DEHYDROGENASE (EC 1.1.1.18).;3.85e-69 AE004461 ~40% similar to numerous known and putative dehydrogenases from diverse bacteria. Putative enzymes Class 3 PA0238_at hypothetical protein PA0238 Pseudomonas PA0238 "PA0238 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1i60a_ // c.1.15.4 // Hypothetical protein IolI;7.92e-51 15595435; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-150 ; 16081019; (NC_000964) alternate gene name: yxdH~myo-inositol catabolism [Bacillus subtilis];3e-10 AE004461 "Hypothetical, unclassified, unknown" Class 4 PA0239_at hypothetical protein PA0239 DUF6 Pseudomonas PA0239 "PA0239 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 16020 // membrane // extended:Unknown; DUF6; 1.6e-14 DUF6 // Integral membrane protein DUF6;1.9e-24 15595436; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-166 ; 15890958; (NC_003063) AGR_L_1685p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];1e-38 numtm:8;Nin-prob:0.81141;Type: ;Span:TM from 13 to 32: Eval:0.34639/TM from 81 to 103: Eval:0.57998/TM from 107 to 124: Eval:0.91134/TM from 131 to 148: Eval:0.94623/TM from 153 to 175: Eval:0.89636/TM from 214 to 233: Eval:0.84278/TM from 245 to 267: Eval:0.43383/TM from 271 to 288: Eval:0.87570 AE004462 45% similar to hypothetical protein [Rickettsia prowazekii]. "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0240_at probable porin PA0240 Peptidase_S43 Pseudomonas PA0240 PA0240 /DEF=probable porin /FUNCTION=Membrane proteins; Transport of small molecules 15288 // porin activity // extended:Unknown; OprD; 2.2e-80 "OprD // outer membrane porin, OprD family;2.2e-80" 5091482; (AF031417) PhaK-like protein [Pseudomonas putida];e-172 ; 15595437; (NC_002516) probable porin [Pseudomonas aeruginosa];0.0 AE004462 53% similar to porin E1 [Pseudomonas aeruginosa]. Membrane proteins; Transport of small molecules Class 3 PA0241_at probable MFS transporter PA0241 sugar_tr Pseudomonas PA0241 PA0241 /DEF=probable MFS transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; sugar_tr; 0.0016 sugar_tr // Sugar (and other) transporter;0.0016 15595438; (NC_002516) probable MFS transporter [Pseudomonas aeruginosa];0.0 ; 12658422; (AF331922) putative hexuronate transporter [Xanthomonas oryzae pv. oryzae];e-107 numtm:8;Nin-prob:0.78881;Type: ;Span:TM from 34 to 52: Eval:0.58046/TM from 67 to 89: Eval:0.97750/TM from 102 to 124: Eval:0.78419/TM from 185 to 207: Eval:0.50419/TM from 319 to 341: Eval:0.93772/TM from 346 to 368: Eval:0.66924/TM from 381 to 403: Eval:0.67735/TM from 413 to 435: Eval:0.48931 AE004462 47% similar to hexuronate transporter ExuT [Escherichia coli]. Membrane proteins; Transport of small molecules Class 3 PA0242_at hypothetical protein PA0242 Glyoxalase Pseudomonas PA0242 PA0242 /DEF=hypothetical protein /FUNCTION=Putative enzymes 1.13.11.27 EC:1.13.11.27; HPPD_HUMAN 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (EC 1.13.11.27) (4HPPD) (HPD).;4.5e-55 Glyoxalase // Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;1.9e-07 "d1cjxa1 // d.32.1.3 // 4-hydroxyphenylpyruvate dioxygenase, HppD;5.34e-52 /// d1i60a_ // c.1.15.4 // Hypothetical protein IolI;6.16e-68" 15595439; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 16265241; (NC_003078) putative 4-hydroxyphenylpyruvate dioxygenase protein [Sinorhizobium meliloti];e-157 EC:1.13.11.27 // HPPD_HUMAN 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (EC 1.13.11.27) (4HPPD) (HPD).;1.49e-102 AE004462 49% similar to 4-hydroxyphenylpyruvate dioxygenase [Pseudomonas sp. P.J. 874.] Putative enzymes 94156461; 92241278 Class 4 PA0243_at probable transcriptional regulator PA0243 tetR Pseudomonas PA0243 PA0243 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; tetR; 3e-16 "tetR // Bacterial regulatory proteins, tetR family;3e-16" d1jt6b1 // a.4.1.9 // Multidrug binding protein QacR;3.41e-13 15595440; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-122 ; 16263784; (NC_003078) hypothetical transcriptional regulator protein [Sinorhizobium meliloti];7e-60 AE004462 44% similar to putative transcriptional regulator [Methanobacterium thermoautotrophicum]. Transcriptional regulators Class 3 PA0244_at hypothetical protein PA0244 Shikimate_DH Pseudomonas PA0244 PA0244 /DEF=hypothetical protein /FUNCTION=Putative enzymes 4764 // shikimate 5-dehydrogenase activity // extended:inferred from mutant phenotype; Shikimate_DH; 3.8e-51 1.1.1.25 EC:1.1.1.25; AROE_PSEAE SHIKIMATE 5-DEHYDROGENASE (EC 1.1.1.25).;2.1e-57 ; EC:1.1.1.24; DHQA_NEUCR QUINATE 5-DEHYDROGENASE (EC 1.1.1.24).;5.2e-66 Shikimate_DH // Shikimate / quinate 5-dehydrogenase;3.8e-51 d1gpja2 // c.2.1.10 // Glutamyl tRNA-reductase middle domain;6.04e-28 16263788; (NC_003078) putative shikimate 5-dehydrogenase protein [Sinorhizobium meliloti];1e-91 ; 15595441; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-159 "EC:1.1.1.25 // AROE_PSEAE SHIKIMATE 5-DEHYDROGENASE (EC 1.1.1.25).;1.27e-75 /// EC:1.5.1.10 // LYS9_YEAST SACCHAROPINE DEHYDROGENASE [NADP+, L-GLUTAMATE FORMING] (EC 1.5.1.10).;1.1e-09" AE004462 47% similar to shikimate 5-dehydrogenase [Escherichia coli]; 49% similar to C terminal half of bifunctional dehydroquinate dehydratase/shikimate dehydrogenase [Nicotiana tabacum] Putative enzymes 94347087 Class 4 PA0245_aroQ2_at 4.2.1.10 3-dehydroquinate dehydratase PA0245 DHquinase_II Pseudomonas PA0245 PA0245 /GENE=aroQ2 /DEF=3-dehydroquinate dehydratase /FUNCTION=Amino acid biosynthesis and metabolism 3855 // 3-dehydroquinate dehydratase activity // extended:inferred from electronic annotation; DHquinase_II; 1.9e-84 DHquinase_II // Dehydroquinase class II;1.9e-84 d1gtza_ // c.23.13.1 // Type II 3-dehydroquinate dehydratase;1.22e-59 13470485; (NC_002678) unknown protein [Mesorhizobium loti];5e-44 ; 15595442; (NC_002516) 3-dehydroquinate dehydratase [Pseudomonas aeruginosa];1e-81 AE004462 72% similar to putative catabolic dehydroquinase [Pseudomonas aeruginosa]; 70% similar to 3-dehydroquinase AroQ [Actinobacillus pleuropneumoniae] "Phenylalanine, tyrosine and tryptophan biosynthesis" Amino acid biosynthesis and metabolism Class 2 PA0246_at probable MFS transporter PA0246 sugar_tr Pseudomonas PA0246 PA0246 /DEF=probable MFS transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; sugar_tr; 0.00041 sugar_tr // Sugar (and other) transporter;0.00041 15595443; (NC_002516) probable MFS transporter [Pseudomonas aeruginosa];0.0 ; 7480676; probable exporter - Streptomyces coelicolor;2e-95 numtm:9;Nin-prob:0.95392;Type: ;Span:TM from 12 to 34: Eval:0.58910/TM from 78 to 100: Eval:0.62639/TM from 104 to 126: Eval:0.73034/TM from 201 to 221: Eval:0.78998/TM from 231 to 248: Eval:0.73701/TM from 269 to 291: Eval:0.35555/TM from 335 to 355: Eval:0.60214/TM from 400 to 422: Eval:0.72254/TM from 465 to 484: Eval:0.81487 AE004462 57% similar to multidrug transporter Bmr3 [Bacillus subtilis]. Membrane proteins; Transport of small molecules 97175579 Class 3 PA0247_pobA_at 1.14.13.2 p-hydroxybenzoate hydroxylase PA0247 Monooxygenase Pseudomonas PA0247 PA0247 /GENE=pobA /DEF=p-hydroxybenzoate hydroxylase /FUNCTION=Carbon compound catabolism 4497 // monooxygenase activity // extended:inferred from electronic annotation; FAD_binding_3; 3e-47 /// 18659 // 4-hydroxybenzoate 3-monooxygenase activity // extended:Unknown; 1.14.13.2; 2.43e-106 1.14.13.2 EC:1.14.13.2; PHHY_PSEFL P-HYDROXYBENZOATE HYDROXYLASE (EC 1.14.13.2) (4-HYDROXYBENZOATE 3- MONOOXYGENASE).;1.3e-110 Monooxygenase // Monooxygenase;2.3e-52 /// FAD_binding_3 // FAD binding domain;3e-47 "d1pbe_1 // c.3.1.2 // p-Hydroxybenzoate hydroxylase, PHBH;2.01e-78 /// d1k0ia2 // d.16.1.2 // p-Hydroxybenzoate hydroxylase (PHBH);2.22e-45" 15595444; (NC_002516) p-hydroxybenzoate hydroxylase [Pseudomonas aeruginosa];0.0 EC:1.4.1.13 // GLTD_ECOLI GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (EC 1.4.1.13) (GLUTAMATE SYNTHASE BETA SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN).;4.44e-33 /// EC:1.4.3.4 // AOFB_HUMAN AMINE OXIDASE [FLAVIN-CONTAINING] B (EC 1.4.3.4) (MONOAMINE OXIDASE) (MAO-B).;2.12e-45 /// EC:1.14.13.2 // PHHY_PSEFL P-HYDROXYBENZOATE HYDROXYLASE (EC 1.14.13.2) (4-HYDROXYBENZOATE 3- MONOOXYGENASE).;2.43e-106 /// EC:1.14.99.7 // ERG1_HUMAN SQUALENE MONOOXYGENASE (EC 1.14.99.7) (SQUALENE EPOXIDASE) (SE).;8.06e-47 AE004463 Aromatic compound catabolism Carbon compound catabolism 96140232 Class 1 PA0248_at probable transcriptional regulator PA0248 HTH_AraC Pseudomonas PA0248 PA0248 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators "6355 // regulation of transcription, DNA-dependent // extended:Unknown; AraC_binding; 0.0017" "HTH_AraC // Bacterial regulatory helix-turn-helix proteins, araC family;2e-08 /// AraC_binding // AraC-like ligand binding domain;0.0017" 540948; pobR protein - Pseudomonas aeruginosa;e-136 ; 15595445; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-166 AE004463 87% similar to putative regulator PobR [Pseudomonas aeruginosa]. Transcriptional regulators Class 3 PA0249_at probable acetyltransferase PA0249 Acetyltransf Pseudomonas PA0249 PA0249 /DEF=probable acetyltransferase /FUNCTION=Putative enzymes 8080 // N-acetyltransferase activity // extended:non-traceable author statement; Acetyltransf; 2.2e-16 2.3.1.57 EC:2.3.1.57; ATDA_HUMAN DIAMINE ACETYLTRANSFERASE (EC 2.3.1.57) (SPERMIDINE/SPERMINE N1- ACETYLTRANSFERASE) (SSAT) (PUTRESCINE ACETYLTRANSFERASE).;3.3e-12 Acetyltransf // Acetyltransferase (GNAT) family;2.2e-16 d1cjwa_ // d.108.1.1 // Serotonin N-acetyltranferase;1.2e-14 540950; hypothetical protein - Pseudomonas aeruginosa;2e-75 ; 15595446; (NC_002516) probable acetyltransferase [Pseudomonas aeruginosa];1e-81 EC:2.3.1.82 // AAC6_SERMA AMINOGLYCOSIDE N6-ACETYLTRANSFERASE (EC 2.3.1.82) (AAC(6)).;4.9e-12 AE004463 54% similar to hypothetical protein YiaC [Escherichia coli] Putative enzymes Class 3 PA0250_at conserved hypothetical protein PA0250 CBS Pseudomonas PA0250 "PA0250 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" CBS // CBS domain;5e-28 15595447; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];3e-74 ; 540949; hypothetical protein (pobR 5' region) - Pseudomonas aeruginosa (fragment);3e-24 EC:1.1.1.205 // IMD2_HUMAN INOSINE-5-MONOPHOSPHATE DEHYDROGENASE 2 (EC 1.1.1.205) (IMP DEHYDROGENASE 2) (IMPDH-II) (IMPD 2).;1.4e-20 AE004463 60% similar to hypothetical protein Rv2406c [Mycobacterium tuberculosis]. "Hypothetical, unclassified, unknown" Class 4 PA0251_at hypothetical protein PA0251 Pseudomonas PA0251 "PA0251 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595448; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-127 AE004463 "Hypothetical, unclassified, unknown" Class 4 PA0252_at hypothetical protein PA0252 Pseudomonas PA0252 "PA0252 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595449; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];6e-54 AE004463 "Hypothetical, unclassified, unknown" Class 4 PA0253_at probable transcriptional regulator PA0253 MarR Pseudomonas PA0253 PA0253 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; MarR; 1.2e-13 MarR // MarR family;1.2e-13 "d1jgsa_ // a.4.5.28 // Multiple antibiotic resistance repressor, MarR;2.67e-21" "16125463; (NC_002696) transcriptional regulator, MarR family [Caulobacter crescentus CB15];1e-08 ; 15595450; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];4e-84" AE004463 55% similar to MarR regulator [Salmonella typhimurium]. Transcriptional regulators 97221583 Class 3 PA0254_at conserved hypothetical protein PA0254 UPF0096 Pseudomonas PA0254 "PA0254 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" UbiD // 3-octaprenyl-4-hydroxybenzoate carboxy-lyase;7.3e-79 15595451; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 6320748; (NC_001136) Hypothetical ORF; Ydr539wp [Saccharomyces cerevisiae];e-107 AE004463 58% similar to probable membrane protein YDR539w [Saccharomyces cerevisiae]. "Hypothetical, unclassified, unknown" Class 4 PA0255_at conserved hypothetical protein PA0255 Pseudomonas PA0255 "PA0255 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16263084; (NC_003037) Conserved hypothetical protein [Sinorhizobium meliloti];1e-52 ; 15595452; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-125 numtm:6;Nin-prob:0.99998;Type: ;Span:TM from 20 to 42: Eval:0.55259/TM from 66 to 88: Eval:0.79267/TM from 95 to 114: Eval:0.71181/TM from 134 to 156: Eval:0.32963/TM from 169 to 191: Eval:0.77494/TM from 195 to 217: Eval:0.93625 AE004463 65% similar to hypothetical protein [Sinorhizobium meliloti]. "Hypothetical, unclassified, unknown" Class 4 PA0256_at hypothetical protein PA0256 Pseudomonas PA0256 "PA0256 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595453; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-176 AE004463 "Hypothetical, unclassified, unknown" Class 4 PA0257_at hypothetical protein PA0257 rve Pseudomonas PA0257 "PA0257 /DEF=hypothetical protein /FUNCTION=Related to phage, transposon, or plasmid" 3677 // DNA binding // extended:inferred from electronic annotation; rve; 2.2e-29 rve // Integrase core domain;2.2e-29 "d1cxqa_ // c.55.3.2 // Retroviral integrase, catalytic domain;5.89e-25" 7767503; (AF224744) transposase [Porphyromonas gingivalis];2e-35 ; 15595454; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-152 AE004463 51% similar to Hp1 [Escherichia coli]. "Related to phage, transposon, or plasmid" 98380392; 98013089 Class 4 PA0258_at hypothetical protein PA0258 Pseudomonas PA0258 "PA0258 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595455; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-27 AE004463 "Hypothetical, unclassified, unknown" Class 4 PA0259_at hypothetical protein PA0259 Pseudomonas PA0259 "PA0259 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595456; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004464 "Hypothetical, unclassified, unknown" Class 4 PA0260_at hypothetical protein PA0260 Pseudomonas PA0260 "PA0260 /DEF=hypothetical protein /FUNCTION=Membrane proteins; Hypothetical, unclassified, unknown" 15595457; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004464 "Membrane proteins; Hypothetical, unclassified, unknown" Class 4 PA0261_at hypothetical protein PA0261 Pseudomonas PA0261 "PA0261 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595458; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];6e-94 AE004464 "Hypothetical, unclassified, unknown" Class 4 PA0262_at conserved hypothetical protein PA0262 Pseudomonas PA0262 "PA0262 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "DUF586 // Protein of unknown function, DUF586;1.1e-56" 15596708; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15595459; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 AE004464 N-terminal ~500 amino acids 56% similar to VgrG and VgrE proteins [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0263_hcpC_s_at secreted protein Hcp PA0263 Pseudomonas PA0263 "PA0263 /GENE=hcpC /DEF=secreted protein Hcp /FUNCTION=Secreted Factors (toxins, enzymes, alginate)" DUF796 // Protein of unknown function (DUF796);6e-86 15595460; (NC_002516) secreted protein Hcp [Pseudomonas aeruginosa];2e-99 ; 15799915; (NC_002655) Z0266 gene product [Escherichia coli O157:H7 EDL933];4e-55 AE004464 72 % similar to Hcp [Vibrio cholerae]; 69% similar to Hcp [Escherichia coli] "Secreted factors (toxins, enzymes, alginate)" 98361897 Class 2 PA0264_at hypothetical protein PA0264 Pseudomonas PA0264 "PA0264 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595461; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];7e-78 AE004464 "Hypothetical, unclassified, unknown" Class 4 PA0265_gabD_at 1.2.1.16 succinate-semialdehyde dehydrogenase PA0265 aldedh Pseudomonas PA0265 PA0265 /GENE=gabD /DEF=succinate-semialdehyde dehydrogenase /FUNCTION=Amino acid biosynthesis and metabolism; Carbon compound catabolism; Central intermediary metabolism 4777 // succinate-semialdehyde dehydrogenase activity // extended:Unknown; 1.2.1.24; 2.32e-187 /// 16491 // oxidoreductase activity // extended:Unknown; aldedh; 1.2e-222 1.2.1.24 EC:1.2.1.24; SSDH_HUMAN SUCCINATE SEMIALDEHYDE DEHYDROGENASE PRECURSOR (EC 1.2.1.24) (NAD(+)- DEPENDENT SUCCINIC SEMIALDEHYDE DEHYDROGENASE).;6.9e-175 ; EC:1.5.1.6; FTDH_HUMAN 10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE (EC 1.5.1.6) (10-FTHFDH).;1.7e-200 aldedh // Aldehyde dehydrogenase family;1.2e-222 "d1bxsa_ // c.82.1.1 // Aldehyde reductase (dehydrogenase), ALDH;9.88e-180" "15595462; (NC_002516) succinate-semialdehyde dehydrogenase [Pseudomonas aeruginosa];0.0 ; 15803178; (NC_002655) succinate-semialdehyde dehydrogenase, NADP-dependent activity [Escherichia coli O157:H7 EDL933];0.0" EC:1.5.1.6 // FTDH_HUMAN 10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE (EC 1.5.1.6) (10-FTHFDH).;3.22e-201 /// EC:1.2.1.24 // SSDH_HUMAN SUCCINATE SEMIALDEHYDE DEHYDROGENASE PRECURSOR (EC 1.2.1.24) (NAD(+)- DEPENDENT SUCCINIC SEMIALDEHYDE DEHYDROGENASE).;2.32e-187 /// EC:1.5.99.8 // PUTA_SALTY BIFUNCTIONAL PUTA PROTEIN [INCLUDES: PROLINE DEHYDROGENASE (EC 1.5.99.8) (PROLINE OXIDASE) DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE (EC 1.5.1.12) (P5C DEHYDROGENASE)].;2.23e-210 AE004464 90% similar to GabD gene product of E. coli Butanoate metabolism; Glutamate metabolism; Tyrosine metabolism Amino acid biosynthesis and metabolism; Carbon compound catabolism; Central intermediary metabolism 79172899 Class 2 PA0266_gabT_at 2.6.1.19 4-aminobutyrate aminotransferase PA0266 aminotran_3 Pseudomonas PA0266 PA0266 /GENE=gabT /DEF=4-aminobutyrate aminotransferase /FUNCTION=Amino acid biosynthesis and metabolism; Carbon compound catabolism; Central intermediary metabolism 8483 // transaminase activity // extended:Unknown; aminotran_3; 3.2e-190 2.6.1.46 "EC:2.6.1.46; RHSA_RHIME DIAMINOBUTYRATE--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.46) (L- DIAMINOBUTYRIC ACID TRANSAMINASE) (DIAMINOBUTYRATE TRANSAMINASE) (DABA AMINOTRANSFERASE) (DABA-AT).;8.4e-138 ; EC:4.1.1.64; DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;2.2e-133 ; EC:5.4.3.8; GSA_XANCH GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE (EC 5.4.3.8) (GSA) (GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE) (GSA-AT).;3.8e-133" aminotran_3 // Aminotransferase class-III;3.2e-190 d2oata_ // c.67.1.4 // Ornithine aminotransferase;6.75e-132 15595463; (NC_002516) 4-aminobutyrate aminotransferase [Pseudomonas aeruginosa];0.0 ; 15428718; (AF299291) delta-aminovalerate aminotransferase DavT [Pseudomonas putida];0.0 "EC:2.6.1.46 // RHSA_RHIME DIAMINOBUTYRATE--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.46) (L- DIAMINOBUTYRIC ACID TRANSAMINASE) (DIAMINOBUTYRATE TRANSAMINASE) (DABA AMINOTRANSFERASE) (DABA-AT).;1.66e-142 /// EC:4.1.99.1 // TNAA_PROVU TRYPTOPHANASE (EC 4.1.99.1) (L-TRYPTOPHAN INDOLE-LYASE) (TNASE).;1.07e-36 /// EC:4.1.1.64 // DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;6.42e-139" AE004465 87% similar to GabT gene product of E. coli Alanine and Aspartate metabolism; Butanoate metabolism; Glutamate metabolism; Propanoate metabolism; Beta-Alanine metabolism Amino acid biosynthesis and metabolism; Carbon compound catabolism; Central intermediary metabolism 91072256 Class 2 PA0267_at hypothetical protein PA0267 response_reg Pseudomonas PA0267 "PA0267 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 156 // two-component response regulator activity // extended:inferred from electronic annotation; response_reg; 6.9e-08 response_reg // Response regulator receiver domain;6.9e-08 15894977; (NC_003030) Response regulator (CheY-like receiver domain and DNA-binding HTH domain) [Clostridium acetobutylicum];4e-08 ; 15595464; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004465 52% similar to putative chemotaxis protein CheY2 [Rhizobium meliloti] "Hypothetical, unclassified, unknown" 0 Class 4 PA0268_at probable transcriptional regulator PA0268 gntR Pseudomonas PA0268 PA0268 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; gntR; 3.3e-19 2.6.1.5 EC:2.6.1.5; ATTY_HUMAN TYROSINE AMINOTRANSFERASE (EC 2.6.1.5) (L-TYROSINE:2-OXOGLUTARATE AMINOTRANSFERASE) (TAT).;8.8e-57 "gntR // Bacterial regulatory proteins, gntR family;3.3e-19" "d1fg7a_ // c.67.1.1 // Histidinol-phosphate aminotransferase;1.77e-57 /// d1hw1a1 // a.4.5.6 // Fatty acid responsive transcription factor FadR, N-terminal domain;8.38e-18" 15595465; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];0.0 ; 15600624; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];1e-84 EC:2.6.1.5 // ATTY_HUMAN TYROSINE AMINOTRANSFERASE (EC 2.6.1.5) (L-TYROSINE:2-OXOGLUTARATE AMINOTRANSFERASE) (TAT).;2.78e-86 /// EC:4.4.1.14 // 1A1C_TOBAC 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE (EC 4.4.1.14) (ACC SYNTHASE) (S-ADENOSYL-L-METHIONINE METHYLTHIOADENOSINE-LYASE).;8.18e-79 AE004465 55% similar to putative regulatory protein MocR [Rhizobium leguminosarum bv. viciae]. Transcriptional regulators Class 3 PA0269_at conserved hypothetical protein PA0269 Pseudomonas PA0269 "PA0269 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3824 // catalytic activity // extended:Unknown; CMD; 2.1e-18 CMD // Carboxymuconolactone decarboxylase family;2.1e-18 15595466; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];1e-80 ; 15964296; (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti];1e-34 AE004465 63% similar to hypothetical protein YdfG [Bacillus subtilis]. "Hypothetical, unclassified, unknown" Class 4 PA0270_at hypothetical protein PA0270 Pseudomonas PA0270 "PA0270 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1fi2a_ // b.82.1.2 // Germin;3.8e-08 16265155; (NC_003078) conserved hypothetical exported protein [Sinorhizobium meliloti];7e-12 ; 15595467; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-74 AE004465 "Hypothetical, unclassified, unknown" Class 4 PA0271_at hypothetical protein PA0271 Pseudomonas PA0271 "PA0271 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" ABM // Antibiotic biosynthesis monooxygenase;1e-08 15597244; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-22 ; 15595468; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-48 AE004465 "Hypothetical, unclassified, unknown" Class 4 PA0272_at probable transcriptional regulator PA0272 LysR_substrate Pseudomonas PA0272 PA0272 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 9.9e-12 "LysR_substrate // LysR substrate binding domain;5e-27 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;9.9e-12" 15595469; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-180 ; 15597747; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];3e-29 AE004465 44% similar to MexT protein [Pseudomonas aeruginosa]. Transcriptional regulators Class 3 PA0273_at probable MFS transporter PA0273 Pseudomonas PA0273 PA0273 /DEF=probable MFS transporter /FUNCTION=Membrane proteins; Transport of small molecules 15595470; (NC_002516) probable MFS transporter [Pseudomonas aeruginosa];0.0 ; 1657537; (U73857) cyanate transport protein [Escherichia coli];2e-76 numtm:12;Nin-prob:0.97786;Type: ;Span:TM from 12 to 34: Eval:0.72834/TM from 49 to 71: Eval:0.60615/TM from 76 to 93: Eval:0.96378/TM from 103 to 125: Eval:0.80621/TM from 137 to 159: Eval:0.31691/TM from 164 to 186: Eval:0.30343/TM from 207 to 229: Eval:0.81913/TM from 244 to 266: Eval:0.30066/TM from 273 to 292: Eval:0.74074/TM from 297 to 319: Eval:0.81388/TM from 331 to 353: Eval:0.47967/TM from 357 to 379: Eval:0.86283 AE004465 58% similar to cyanate transport protein CynX [Escherichia coli]. Membrane proteins; Transport of small molecules Class 3 PA0274_at hypothetical protein PA0274 Pseudomonas PA0274 "PA0274 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595471; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-143 AE004465 "Hypothetical, unclassified, unknown" Class 4 PA0275_at probable transcriptional regulator PA0275 cNMP_binding Pseudomonas PA0275 PA0275 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators cNMP_binding // Cyclic nucleotide-binding domain;1.5e-17 "d1hw5a1 // a.4.5.4 // Catabolite gene activator protein (CAP), C-terminal domain;1.59e-09 /// d1hw5a2 // b.82.3.2 // Catabolite gene activator protein, N-terminal domain;9.37e-28" 15828234; (NC_002677) putative Crp/Fnr-family transcriptional regulator [Mycobacterium leprae];4e-16 ; 15595472; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-127 AE004465 48% similar to hypothetical protein Rv3676 [Mycobacterium tuberculosis]. Transcriptional regulators Class 3 PA0276_at hypothetical protein PA0276 Pseudomonas PA0276 "PA0276 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" DUF962 // Protein of unknown function (DUF962);2.2e-80 15595473; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];7e-94 ; 5091483; (AF031417) PRS2-like protein [Pseudomonas putida];2e-57 numtm:4;Nin-prob:0.98929;Type: ;Span:TM from 21 to 40: Eval:0.45685/TM from 44 to 63: Eval:0.66944/TM from 94 to 116: Eval:0.43353/TM from 128 to 147: Eval:0.51604 AE004465 "Hypothetical, unclassified, unknown; Membrane proteins" 91353083 Class 4 PA0277_at conserved hypothetical protein PA0277 Peptidase_M48 Pseudomonas PA0277 "PA0277 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 4222 // metalloendopeptidase activity // extended:inferred from electronic annotation; Peptidase_M48; 4.4e-24 Peptidase_M48 // Peptidase family M48;4.4e-24 15595474; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-139 ; 15800770; (NC_002655) putative heat shock protein [Escherichia coli O157:H7 EDL933];2e-77 AE004465 74% similar to hypothetical proteins YcaL [Escherichia coli] and YggG [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0278_at hypothetical protein PA0278 Pseudomonas PA0278 "PA0278 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF81 // Domain of unknown function DUF81;1.2e-47 15595475; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-138 ; 13472029; (NC_002678) hypothetical protein [Mesorhizobium loti];6e-62 numtm:8;Nin-prob:0.19783;Type: ;Span:TM from 6 to 28: Eval:0.54846/TM from 35 to 57: Eval:0.43027/TM from 77 to 96: Eval:0.56736/TM from 103 to 125: Eval:0.70426/TM from 140 to 162: Eval:0.63732/TM from 169 to 188: Eval:0.90541/TM from 198 to 220: Eval:0.84435/TM from 227 to 249: Eval:0.55803 AE004466 "Hypothetical, unclassified, unknown" Class 4 PA0279_at probable transcriptional regulator PA0279 HTH_5 Pseudomonas PA0279 PA0279 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_5; 7.9e-07 "HTH_5 // Bacterial regulatory protein, arsR family;7.9e-07" d1smta_ // a.4.5.5 // SmtB repressor;3.51e-16 15595476; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-130 ; 13473867; (NC_002678) transcriptional regulator [Mesorhizobium loti];7e-43 AE004466 59% similar to hypothetical protein YdfF [Bacillus subtilis] Transcriptional regulators Class 3 PA0280_cysA_at sulfate transport protein CysA PA0280 ABC_tran Pseudomonas PA0280 PA0280 /GENE=cysA /DEF=sulfate transport protein CysA /FUNCTION=Transport of small molecules 4009 // ATP-binding cassette (ABC) transporter activity // extended:inferred from electronic annotation; ABC_tran; 2.8e-75 ABC_tran // ABC transporter;2.8e-75 "d1g2912 // c.37.1.12 // Maltose transport protein MalK, N-terminal domain;4.09e-79" 11934957; (AF285185) unknown [Cucumis sativus];e-104 ; 15595477; (NC_002516) sulfate transport protein CysA [Pseudomonas aeruginosa];0.0 AE004466 71% similar to sulfate transport ATP-binding protein CysA [Escherichia coli]. Transport of small molecules Class 2 PA0281_cysW_at sulfate transport protein CysW PA0281 BPD_transp Pseudomonas PA0281 PA0281 /GENE=cysW /DEF=sulfate transport protein CysW /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 6.5e-23 BPD_transp // Binding-protein-dependent transport system inner membrane component;6.5e-23 15595478; (NC_002516) sulfate transport protein CysW [Pseudomonas aeruginosa];e-160 ; 13471638; (NC_002678) permease protein of sulfate ABC transporter [Mesorhizobium loti];e-100 numtm:6;Nin-prob:0.99937;Type: ;Span:TM from 23 to 45: Eval:0.61444/TM from 71 to 93: Eval:0.83446/TM from 106 to 128: Eval:0.93441/TM from 143 to 165: Eval:0.89222/TM from 204 to 226: Eval:0.44070/TM from 249 to 271: Eval:0.92866 AE004466 72% similar to sulfate/thiosulfate transport protein cysW [Escherichia coli] Membrane proteins; Transport of small molecules Class 2 PA0282_cysT_at sulfate transport protein CysT PA0282 BPD_transp Pseudomonas PA0282 PA0282 /GENE=cysT /DEF=sulfate transport protein CysT /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 1e-26 BPD_transp // Binding-protein-dependent transport system inner membrane component;1e-26 15615690; (NC_002570) sulfate ABC transporter (permease) [Bacillus halodurans];2e-94 ; 15595479; (NC_002516) sulfate transport protein CysT [Pseudomonas aeruginosa];e-150 numtm:6;Nin-prob:0.99076;Type: ;Span:TM from 12 to 34: Eval:0.52188/TM from 63 to 85: Eval:0.70900/TM from 98 to 120: Eval:0.90946/TM from 135 to 157: Eval:0.31824/TM from 183 to 205: Eval:0.85690/TM from 243 to 265: Eval:0.66688 AE004466 71% similar to sulfate/thiosulfate transport protein CysT [Escherichia coli]. Membrane proteins; Transport of small molecules Class 2 PA0283_sbp_at sulfate-binding protein precursor PA0283 Sulphate_bind Pseudomonas PA0283 PA0283 /GENE=sbp /DEF=sulfate-binding protein precursor /FUNCTION=Transport of small molecules 5215 // transporter activity // extended:traceable author statement; SBP_bac_1; 4e-08 SBP_bac_1 // Bacterial extracellular solute-binding protein;4e-08 d1sbp__ // c.94.1.1 // Sulphate-binding protein;2.45e-128 15888161; (NC_003062) AGR_C_1501p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];e-121 ; 15595480; (NC_002516) sulfate-binding protein precursor [Pseudomonas aeruginosa];0.0 AE004466 78% similar to periplasmic sulphate binding protein Sbp [Escherichia coli]. Transport of small molecules Class 2 PA0284_at hypothetical protein PA0284 Pseudomonas PA0284 "PA0284 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595481; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-26 AE004466 "Hypothetical, unclassified, unknown" Class 4 PA0285_at conserved hypothetical protein PA0285 EAL Pseudomonas PA0285 "PA0285 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" "6355 // regulation of transcription, DNA-dependent // extended:Unknown; PAC; 2.4e-13" GGDEF // GGDEF domain;2.5e-54 /// PAC // PAC motif;8.8e-24 /// PAS // PAS domain;2.4e-13 /// EAL // EAL domain;1.7e-121 "d1jnua_ // d.110.3.4 // Photoreceptor phy3 flavin-binding domain, lov2;5.27e-33" 15595482; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15595772; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-159 numtm:2;Nin-prob:0.69829;Type:SIGNAL;Span:TM from 5 to 24: Eval:0.96324/TM from 39 to 61: Eval:0.95802 AE004466 C-terminal 500 amino acids are 59% similar to a region of putative nitrogen fixation positive activator protein [Synechocystis sp.]. "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0286_at 1.14.99.5 probable fatty acid desaturase PA0286 FA_desaturase Pseudomonas PA0286 PA0286 /DEF=probable fatty acid desaturase /FUNCTION=Fatty acid and phospholipid metabolism 16491 // oxidoreductase activity // extended:Unknown; FA_desaturase; 4.1e-06 1.14.99.5 EC:1.14.99.5; ACOD_HUMAN ACYL-COA DESATURASE (EC 1.14.99.5) (STEAROYL-COA DESATURASE) (FATTY ACID DESATURASE) (DELTA(9)-DESATURASE).;1.8e-60 FA_desaturase // Fatty acid desaturase;4.1e-06 1055272; (U37517) stearoyl-CoA desaturase [Azotobacter vinelandii];e-161 ; 15595483; (NC_002516) probable fatty acid desaturase [Pseudomonas aeruginosa];0.0 numtm:3;Nin-prob:0.00217;Type: ;Span:TM from 10 to 32: Eval:0.94939/TM from 135 to 157: Eval:0.75993/TM from 162 to 181: Eval:0.58754 EC:1.14.99.5 // ACOD_HUMAN ACYL-COA DESATURASE (EC 1.14.99.5) (STEAROYL-COA DESATURASE) (FATTY ACID DESATURASE) (DELTA(9)-DESATURASE).;4.14e-73 AE004466 85% similar to stearoyl-CoA desaturase [Azotobacter vinelandii] Fatty acid and phospholipid metabolism Class 3 PA0287_at probable sodium:solute symporter PA0287 SSF Pseudomonas PA0287 PA0287 /DEF=probable sodium:solute symporter /FUNCTION=Transport of small molecules 5215 // transporter activity // extended:traceable author statement; SSF; 2.7e-10 SSF // Sodium:solute symporter family;2.7e-10 15596615; (NC_002516) probable sodium:solute symport protein [Pseudomonas aeruginosa];e-146 ; 15595484; (NC_002516) probable sodium:solute symporter [Pseudomonas aeruginosa];0.0 numtm:11;Nin-prob:0.00168;Type: ;Span:TM from 5 to 22: Eval:0.91981/TM from 68 to 90: Eval:0.87005/TM from 118 to 140: Eval:0.35460/TM from 150 to 172: Eval:0.69628/TM from 179 to 201: Eval:0.55527/TM from 216 to 238: Eval:0.54575/TM from 310 to 332: Eval:0.46018/TM from 353 to 375: Eval:0.43205/TM from 379 to 398: Eval:0.88477/TM from 405 to 427: Eval:0.67838/TM from 432 to 449: Eval:0.83555 AE004466 46% similar to sodium/pantothenate symporter PanF [Escherichia coli] Transport of small molecules 90299808 Class 3 PA0288_speB1_at 3.5.3.11 agmatinase PA0288 arginase Pseudomonas PA0288 PA0288 /GENE=speB1 /DEF=agmatinase /FUNCTION=Amino acid biosynthesis and metabolism 8783 // agmatinase activity // extended:Unknown; 3.5.3.11; 1.12e-94 /// 3824 // catalytic activity // extended:Unknown; arginase; 9.4e-61 3.5.3.11 EC:3.5.3.11; SPEB_STRCL POSSIBLE AGMATINASE (EC 3.5.3.11) (AGMATINE UREOHYDROLASE) (AUH) (PROCLAVAMINIC ACID AMIDINO HYDROLASE).;8.6e-81 arginase // Arginase family;9.4e-61 d1gq6a_ // c.42.1.1 // Proclavaminate amidino hydrolase;2.74e-92 15596618; (NC_002516) agmatinase [Pseudomonas aeruginosa];8e-84 ; 15595485; (NC_002516) agmatinase [Pseudomonas aeruginosa];0.0 EC:3.5.3.11 // SPEB_STRCL POSSIBLE AGMATINASE (EC 3.5.3.11) (AGMATINE UREOHYDROLASE) (AUH) (PROCLAVAMINIC ACID AMIDINO HYDROLASE).;1.12e-94 AE004466 58% similar to proclavaminate amidino hydrolase [Streptomyces clavuligerus]; 57% similar to speB gene product [E. coli] Arginine and proline metabolism Amino acid biosynthesis and metabolism 94374706; 95325311 Class 2 PA0289_at probable transcriptional regulator PA0289 LysR_substrate Pseudomonas PA0289 PA0289 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 2.8e-13 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;2.8e-13 /// LysR_substrate // LysR substrate binding domain;6.1e-24" 15596342; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];3e-59 ; 15595486; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];0.0 AE004466 39% similar to LysR-type regulatory protein [Comamonas sp. JS765]. Transcriptional regulators Class 3 PA0290_at hypothetical protein PA0290 GGDEF Pseudomonas PA0290 "PA0290 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "6355 // regulation of transcription, DNA-dependent // extended:Unknown; PAC; 5.6e-07" PAC // PAC motif;5.6e-07 /// GGDEF // GGDEF domain;2.4e-56 15595487; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 16331091; (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803];6e-31 AE004467 54% similar to C-terminus of PleD [Caulobacter crescentus] "Hypothetical, unclassified, unknown" 96042099 Class 4 PA0291_oprE_at outer membrane porin OprE precursor PA0291 Peptidase_S43 Pseudomonas PA0291 PA0291 /GENE=oprE /DEF=outer membrane porin OprE precursor /FUNCTION=Membrane proteins 15288 // porin activity // extended:Unknown; OprD; 0 "OprD // outer membrane porin, OprD family;0" 15595488; (NC_002516) outer membrane porin OprE precursor [Pseudomonas aeruginosa];0.0 ; 15595952; (NC_002516) probable porin [Pseudomonas aeruginosa];e-108 numtm:1;Nin-prob:0.79314;Type:SIGNAL;Span:TM from 11 to 33: Eval:0.56548 AE004467 100% similar to protein E1 [Pseudomonas aeruginosa] Membrane proteins 93360827; 98258025 Class 1 PA0292_at conserved hypothetical protein PA0292 Pseudomonas PA0292 "PA0292 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" PAD_porph // Porphyromonas-type peptidyl-arginine deiminase;1.1e-252 5712716; (AF153708) unknown [Pseudomonas sp. BG33R];e-155 ; 15595489; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 AE004467 63% similar to A638R [Paramecium bursaria Chlorella virus 1] "Hypothetical, unclassified, unknown" Class 4 PA0293_at probable hydratase PA0293 CN_hydrolase Pseudomonas PA0293 PA0293 /DEF=probable hydratase /FUNCTION=Putative enzymes "16810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // extended:Unknown; CN_hydrolase; 3.5e-69" 3.5.5.1 "EC:3.5.5.1; NRLB_KLEPO NITRILASE, BROMOXYNIL-SPECIFIC (EC 3.5.5.1).;3.4e-84 ; EC:3.5.1.6; BUP_RAT BETA-UREIDOPROPIONASE (EC 3.5.1.6) (BETA-ALANINE SYNTHASE) (N-CARBAMOYL-BETA-ALANINE AMIDOHYDROLASE).;7.2e-90 ; EC:4.2.1.66; CYHY_GLOSO CYANIDE HYDRATASE (EC 4.2.1.66) (FORMAMIDE HYDROLYASE).;1.7e-76" CN_hydrolase // Carbon-nitrogen hydrolase;3.5e-69 d1erza_ // d.160.1.2 // N-carbamoyl-D-aminoacid amidohydrolase;2.65e-87 5262946; (Y19104) beta-alanine synthase [Lycopersicon esculentum];e-103 ; 15595490; (NC_002516) probable hydratase [Pseudomonas aeruginosa];e-172 "EC:3.5.1.6 // BUP_RAT BETA-UREIDOPROPIONASE (EC 3.5.1.6) (BETA-ALANINE SYNTHASE) (N-CARBAMOYL-BETA-ALANINE AMIDOHYDROLASE).;4.35e-97 /// EC:4.2.1.66 // CYHY_GLOSO CYANIDE HYDRATASE (EC 4.2.1.66) (FORMAMIDE HYDROLYASE).;1.26e-94 /// EC:3.5.5.1 // NRLB_KLEPO NITRILASE, BROMOXYNIL-SPECIFIC (EC 3.5.5.1).;1.32e-93" AE004467 80% similar to putative beta-alanine synthetase [Arabidopsis thaliana]. Putative enzymes Class 3 PA0294_at probable transcriptional regulator PA0294 tetR Pseudomonas PA0294 PA0294 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; tetR; 9.8e-10 "tetR // Bacterial regulatory proteins, tetR family;9.8e-10" 15595491; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-122 AE004467 49% similar to putative transcriptional regulator [Streptomyces coelicolor]. Transcriptional regulators Class 3 PA0295_at probable periplasmic polyamine binding protein PA0295 SBP_bac_1 Pseudomonas PA0295 PA0295 /DEF=probable periplasmic polyamine binding protein /FUNCTION=Transport of small molecules 5215 // transporter activity // extended:traceable author statement; SBP_bac_1; 0.00019 SBP_bac_1 // Bacterial extracellular solute-binding protein;0.00019 d1a99a_ // c.94.1.1 // Putrescine receptor (PotF);2.27e-94 15596607; (NC_002516) probable periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa];1e-66 ; 15595492; (NC_002516) probable periplasmic polyamine binding protein [Pseudomonas aeruginosa];0.0 AE004467 57% similar to putrescine transport protein PotF [Escherichia coli] Transport of small molecules 97061202 Class 3 PA0296_s_at probable glutamine synthetase PA0296 gln-synt Pseudomonas PA0296 PA0296 /DEF=probable glutamine synthetase /FUNCTION=Putative enzymes 4356 // glutamate-ammonia ligase activity // extended:inferred from electronic annotation; gln-synt; 6.8e-107 6.3.1.2 EC:6.3.1.2; GLNA_HUMAN GLUTAMINE SYNTHETASE (EC 6.3.1.2) (GLUTAMATE--AMMONIA LIGASE).;2e-59 "gln-synt // Glutamine synthetase, catalytic domain;6.8e-107" "d1f52a1 // d.15.9.1 // Glutamine synthetase, N-terminal domain;2.14e-09 /// d1htqa2 // d.128.1.1 // Glutamine synthetase, C-terminal domain;3.59e-110" 15595493; (NC_002516) probable glutamine synthetase [Pseudomonas aeruginosa];0.0 ; 15597236; (NC_002516) probable glutamine synthetase [Pseudomonas aeruginosa];0.0 EC:6.3.1.2 // GLNA_HUMAN GLUTAMINE SYNTHETASE (EC 6.3.1.2) (GLUTAMATE--AMMONIA LIGASE).;5.68e-93 AE004467 63% similar to putative glutamine synthetase YcjK [Escherichia coli] Putative enzymes Class 3 PA0297_at probable glutamine amidotransferase PA0297 GATase Pseudomonas PA0297 PA0297 /DEF=probable glutamine amidotransferase /FUNCTION=Amino acid biosynthesis and metabolism 3824 // catalytic activity // extended:Unknown; GATase; 0.00011 3.4.19.9 EC:3.4.19.9; GGH_HUMAN GAMMA-GLUTAMYL HYDROLASE PRECURSOR (EC 3.4.19.9) (GAMMA-GLU-X CARBOXYPEPTIDASE) (CONJUGASE) (GH).;7.7e-31 GATase // Glutamine amidotransferase class-I;0.00011 "d1qdlb_ // c.23.16.1 // Anthranilate synthase GAT subunit, TrpG;7.36e-34" 15595494; (NC_002516) probable glutamine amidotransferase [Pseudomonas aeruginosa];e-145 ; 13474307; (NC_002678) hypothetical protein [Mesorhizobium loti];3e-60 EC:4.1.3.27 // YB71_HAEIN PUTATIVE ANTHRANILATE SYNTHASE COMPONENT II (EC 4.1.3.27) (GLUTAMINE AMIDO-TRANSFERASE).;4.29e-28 /// EC:2.4.2.18 // TRPG_THEMA ANTHRANILATE SYNTHASE COMPONENT II (EC 4.1.3.27) [INCLUDES: GLUTAMINE AMIDOTRANSFERASE ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.18)].;5.72e-35 /// EC:5.3.1.24 // TRPG_SCHPO ANTHRANILATE SYNTHASE COMPONENT II (EC 4.1.3.27) [INCLUDES: GLUTAMINE AMIDOTRANSFERASE INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (EC 4.1.1.48) (IGPS) N-(5-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (EC 5.3.1.24) (PRAI)].;7.68e-35 /// EC:4.1.1.48 // TRPG_YEAST ANTHRANILATE SYNTHASE COMPONENT II (EC 4.1.3.27) [INCLUDES: GLUTAMINE AMIDOTRANSFERASE INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (EC 4.1.1.48) (PRAI)].;2.25e-31 /// EC:3.4.19.9 // GGH_HUMAN GAMMA-GLUTAMYL HYDROLASE PRECURSOR (EC 3.4.19.9) (GAMMA-GLU-X CARBOXYPEPTIDASE) (CONJUGASE) (GH).;6.21e-63 AE004467 60% similar to YcjL probable amidotransferase subunit [Escherichia coli] Amino acid biosynthesis and metabolism Class 3 PA0298_at probable glutamine synthetase PA0298 gln-synt Pseudomonas PA0298 PA0298 /DEF=probable glutamine synthetase /FUNCTION=Putative enzymes 4356 // glutamate-ammonia ligase activity // extended:inferred from electronic annotation; gln-synt; 4.4e-115 6.3.1.2 EC:6.3.1.2; GLNA_HUMAN GLUTAMINE SYNTHETASE (EC 6.3.1.2) (GLUTAMATE--AMMONIA LIGASE).;7.8e-68 "gln-synt // Glutamine synthetase, catalytic domain;4.4e-115" "d1f52a2 // d.128.1.1 // Glutamine synthetase, C-terminal domain;1.88e-111 /// d1htqa1 // d.15.9.1 // Glutamine synthetase, N-terminal domain;1.95e-12" 15595495; (NC_002516) probable glutamine synthetase [Pseudomonas aeruginosa];0.0 ; 16127360; (NC_002696) glutamine synthetase family protein [Caulobacter crescentus CB15];e-143 EC:6.3.1.2 // GLNA_HUMAN GLUTAMINE SYNTHETASE (EC 6.3.1.2) (GLUTAMATE--AMMONIA LIGASE).;1.69e-109 AE004467 50% similar to putative glutamine synthetase YcjK [Escherichia coli] Putative enzymes Class 3 PA0299_at probable aminotransferase PA0299 aminotran_3 Pseudomonas PA0299 PA0299 /DEF=probable aminotransferase /FUNCTION=Putative enzymes 8483 // transaminase activity // extended:Unknown; aminotran_3; 2.5e-116 5.4.3.8 "EC:5.4.3.8; GSA_XANCH GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE (EC 5.4.3.8) (GSA) (GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE) (GSA-AT).;3.4e-116 ; EC:4.1.1.64; DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;7.7e-121 ; EC:2.6.1.18; OAPT_PSEPU OMEGA-AMINO ACID--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.18) (OMEGA-APT) (BETA-ALANINE--PYRUVATE AMINOTRANSFERASE).;3.2e-125" aminotran_3 // Aminotransferase class-III;2.5e-116 d2oata_ // c.67.1.4 // Ornithine aminotransferase;5.15e-125 15595496; (NC_002516) probable aminotransferase [Pseudomonas aeruginosa];0.0 ; 13194611; (AF323694) BioA [Pseudomonas fluorescens];0.0 "EC:2.6.1.18 // OAPT_PSEPU OMEGA-AMINO ACID--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.18) (OMEGA-APT) (BETA-ALANINE--PYRUVATE AMINOTRANSFERASE).;7.84e-140 /// EC:4.1.99.1 // TNAA_PROVU TRYPTOPHANASE (EC 4.1.99.1) (L-TRYPTOPHAN INDOLE-LYASE) (TNASE).;3.43e-71 /// EC:4.1.1.64 // DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;3.04e-136" AE004467 53% similar to beta-alanine--pyruvate transaminase [Pseudomonas putida] Putative enzymes 92316928 Class 3 PA0300_potF2_at polyamine transport protein PA0300 SBP_bac_1 Pseudomonas PA0300 PA0300 /GENE=potF2 /DEF=polyamine transport protein /FUNCTION=Transport of small molecules 5215 // transporter activity // extended:traceable author statement; SBP_bac_1; 3.3e-14 2.5.1.2 EC:2.5.1.2; THI1_PANTH THIAMINASE I PRECURSOR (EC 2.5.1.2) (THIAMINE PYRIDINYLASE).;4e-12 SBP_bac_1 // Bacterial extracellular solute-binding protein;3.3e-14 d1a99a_ // c.94.1.1 // Putrescine receptor (PotF);1.11e-130 15595497; (NC_002516) polyamine transport protein [Pseudomonas aeruginosa];0.0 ; 13194612; (AF323694) PotF1 [Pseudomonas fluorescens];e-164 AE004468 74% similar to E. coli potF gene product. Transport of small molecules Class 2 PA0301_potF3_at polyamine transport protein PA0301 SBP_bac_1 Pseudomonas PA0301 PA0301 /GENE=potF3 /DEF=polyamine transport protein /FUNCTION=Transport of small molecules 5215 // transporter activity // extended:traceable author statement; SBP_bac_1; 6.1e-15 2.5.1.2 EC:2.5.1.2; THI1_PANTH THIAMINASE I PRECURSOR (EC 2.5.1.2) (THIAMINE PYRIDINYLASE).;1.4e-08 SBP_bac_1 // Bacterial extracellular solute-binding protein;6.1e-15 d1a99a_ // c.94.1.1 // Putrescine receptor (PotF);9.25e-127 15595498; (NC_002516) polyamine transport protein [Pseudomonas aeruginosa];0.0 ; 13194613; (AF323694) PotF2 [Pseudomonas fluorescens];e-147 AE004468 73% similar to E. coli potF gene product. Transport of small molecules Class 2 PA0302_potG_at polyamine transport protein PotG PA0302 ABC_tran Pseudomonas PA0302 PA0302 /GENE=potG /DEF=polyamine transport protein PotG /FUNCTION=Transport of small molecules 4009 // ATP-binding cassette (ABC) transporter activity // extended:inferred from electronic annotation; ABC_tran; 1.8e-70 ABC_tran // ABC transporter;1.8e-70 "d1g2912 // c.37.1.12 // Maltose transport protein MalK, N-terminal domain;1.95e-73" 15595499; (NC_002516) polyamine transport protein PotG [Pseudomonas aeruginosa];0.0 ; 13194614; (AF323694) PotG [Pseudomonas fluorescens];e-174 AE004468 74% similar to ATP-binding component of putrescine transport system PotG [Escherichia coli]. Transport of small molecules Class 2 PA0303_potH_at polyamine transport protein PotH PA0303 BPD_transp Pseudomonas PA0303 PA0303 /GENE=potH /DEF=polyamine transport protein PotH /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 1.2e-15 BPD_transp // Binding-protein-dependent transport system inner membrane component;1.2e-15 15595500; (NC_002516) polyamine transport protein PotH [Pseudomonas aeruginosa];e-165 ; 13194615; (AF323694) PotH [Pseudomonas fluorescens];e-141 numtm:5;Nin-prob:0.97017;Type: ;Span:TM from 7 to 28: Eval:0.58306/TM from 110 to 132: Eval:0.56078/TM from 161 to 183: Eval:0.53343/TM from 216 to 238: Eval:0.37746/TM from 260 to 282: Eval:0.73246 AE004468 83% similar to PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN PotH [Escherichia coli] Membrane proteins; Transport of small molecules Class 2 PA0304_potI_at polyamine transport protein PotI PA0304 BPD_transp Pseudomonas PA0304 PA0304 /GENE=potI /DEF=polyamine transport protein PotI /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 3.5e-08 BPD_transp // Binding-protein-dependent transport system inner membrane component;3.5e-08 13194616; (AF323694) PotI [Pseudomonas fluorescens];e-126 ; 15595501; (NC_002516) polyamine transport protein PotI [Pseudomonas aeruginosa];e-162 numtm:6;Nin-prob:0.98448;Type: ;Span:TM from 7 to 29: Eval:0.70441/TM from 66 to 88: Eval:0.32102/TM from 101 to 123: Eval:0.67939/TM from 136 to 158: Eval:0.32367/TM from 179 to 201: Eval:0.77946/TM from 237 to 259: Eval:0.46322 AE004468 80% similar to putrescine transport system permease protein PotI [Escherichia coli]. Membrane proteins; Transport of small molecules Class 2 PA0305_at hypothetical protein PA0305 Penicil_amidase Pseudomonas PA0305 "PA0305 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16787 // hydrolase activity // extended:Unknown; Penicil_amidase; 7.7e-301 3.5.1.11 EC:3.5.1.11; PAC_KLUCI PENICILLIN ACYLASE PRECURSOR (EC 3.5.1.11) (PENICILLIN AMIDASE) (PENICILLIN AMIDOHYDROLASE).;2.4e-133 Penicil_amidase // Penicillin amidase;7.7e-301 d1keha_ // d.153.1.2 // Cephalosporin acylase;3.11e-211 15595502; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15596229; (NC_002516) probable penicillin amidase [Pseudomonas aeruginosa];1e-71 numtm:1;Nin-prob:0.98738;Type:SIGNAL;Span:TM from 5 to 24: Eval:0.80659 EC:3.5.1.11 // PAC_KLUCI PENICILLIN ACYLASE PRECURSOR (EC 3.5.1.11) (PENICILLIN AMIDASE) (PENICILLIN AMIDOHYDROLASE).;5.84e-234 AE004468 40% similar to PENICILLIN ACYLASE II PRECURSOR [Pseudomonas sp.] "Hypothetical, unclassified, unknown" Class 4 PA0306_at probable transcriptional regulator PA0306 Pseudomonas PA0306 PA0306 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 15599981; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];2e-35 ; 15595503; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];0.0 AE004468 46% similar to transcriptional regulator PhbR [Pseudomonas sp. 61-3] Transcriptional regulators Class 3 PA0307_at hypothetical protein PA0307 Pseudomonas PA0307 "PA0307 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595504; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-119 numtm:1;Nin-prob:0.98518;Type:SIGNAL;Span:TM from 20 to 42: Eval:0.33477 AE004469 "Hypothetical, unclassified, unknown" Class 4 PA0308_at hypothetical protein PA0308 Pseudomonas PA0308 "PA0308 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3.8.1.5 EC:3.8.1.5; YM96_MYCTU PUTATIVE HALOALKANE DEHALOGENASE (EC 3.8.1.5).;4e-16 ; EC:3.1.1.24; ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;7.4e-17 d1imja_ // c.69.1.23 // Ccg1/TafII250-interacting factor B (Cib);1.74e-20 15595505; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15613442; (NC_002570) BH0879~unknown conserved protein in others [Bacillus halodurans];4e-30 EC:1.11.1.10 // PRXC_SYNY3 PUTATIVE NON-HEME CHLOROPEROXIDASE (EC 1.11.1.10) (CHLORIDE PEROXIDASE).;2.28e-22 /// EC:1.13.12.5 // LUCI_RENRE RENILLA-LUCIFERIN 2-MONOOXYGENASE (EC 1.13.12.5) (RENILLA-TYPE LUCIFERASE).;1.66e-13 /// EC:3.1.1.24 // ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;6.55e-16 /// EC:3.3.2.3 // HYES_HUMAN SOLUBLE EPOXIDE HYDROLASE (SEH) (EC 3.3.2.3) (EPOXIDE HYDRATASE) (CYTOSOLIC EPOXIDE HYDROLASE) (CEH).;2.21e-20 /// EC:3.8.1.5 // YM96_MYCTU PUTATIVE HALOALKANE DEHALOGENASE (EC 3.8.1.5).;1.11e-18 AE004469 "Hypothetical, unclassified, unknown" Class 4 PA0309_at hypothetical protein PA0309 Pseudomonas PA0309 "PA0309 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 13471507; (NC_002678) unknown protein [Mesorhizobium loti];8e-11 ; 15595506; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-137 AE004469 "Hypothetical, unclassified, unknown" Class 4 PA0310_at hypothetical protein PA0310 2OG-FeII_Oxy Pseudomonas PA0310 "PA0310 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 2OG-FeII_Oxy // 2OG-Fe(II) oxygenase superfamily;2.9e-08 15601702; (NC_002506) SM-20-related protein [Vibrio cholerae];3e-27 ; 15595507; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-136 AE004469 "Hypothetical, unclassified, unknown" Class 4 PA0311_at hypothetical protein PA0311 Pseudomonas PA0311 "PA0311 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595508; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-100 AE004469 "Hypothetical, unclassified, unknown" Class 4 PA0312_at conserved hypothetical protein PA0312 Pseudomonas PA0312 "PA0312 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF523 // Protein of unknown function (DUF523);9.7e-84 15964609; (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti];5e-34 ; 15595509; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];1e-91 AE004469 58% similar to hypothetical protein YbbK [Bacillus subtilis]. "Hypothetical, unclassified, unknown" Class 4 PA0313_at probable permease of ABC transporter PA0313 BPD_transp Pseudomonas PA0313 PA0313 /DEF=probable permease of ABC transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 1.1e-22 BPD_transp // Binding-protein-dependent transport system inner membrane component;1.1e-22 "15595510; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];e-124 ; 15805592; (NC_001263) amino acid ABC transporter, permease protein [Deinococcus radiodurans];5e-59" numtm:4;Nin-prob:0.80254;Type: ;Span:TM from 7 to 26: Eval:0.69237/TM from 30 to 52: Eval:0.88520/TM from 64 to 86: Eval:0.80432/TM from 91 to 113: Eval:0.63213 AE004469 67% similar to Escherichia coli putative transport system permease protein YecS. Membrane proteins; Transport of small molecules Class 3 PA0314_at probable binding protein component of ABC transporter PA0314 SBP_bac_3 Pseudomonas PA0314 PA0314 /DEF=probable binding protein component of ABC transporter /FUNCTION=Transport of small molecules 5215 // transporter activity // extended:traceable author statement; SBP_bac_3; 3.8e-76 4.2.1.51 EC:4.2.1.51; PHEC_PSEAE CYCLOHEXADIENYL DEHYDRATASE PRECURSOR [INCLUDES: PREPHENATE DEHYDRATASE (EC 4.2.1.51); AROGENATE DEHYDRATASE (EC 4.-.-.-)].;2.3e-60 "SBP_bac_3 // Bacterial extracellular solute-binding proteins, family 3;3.8e-76" d1wdna_ // c.94.1.1 // Glutamine-binding protein;1.53e-59 "15805591; (NC_001263) amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans];4e-55 ; 15595511; (NC_002516) probable binding protein component of ABC transporter [Pseudomonas aeruginosa];e-143" "EC:4.2.1.51 // PHEC_PSEAE CYCLOHEXADIENYL DEHYDRATASE PRECURSOR [INCLUDES: PREPHENATE DEHYDRATASE (EC 4.2.1.51) AROGENATE DEHYDRATASE (EC 4.-.-.-)].;4.28e-69 /// EC:4.1.1.55 // PHTD_COMTE 4,5-DIHYDROXYPHTHALATE DECARBOXYLASE (EC 4.1.1.55) (DHP DECARBOXYLASE).;6.75e-08" AE004469 58% similar to Escherichia coli FliY protein precursor. Transport of small molecules Class 3 PA0315_at hypothetical protein PA0315 Pseudomonas PA0315 "PA0315 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595512; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-80 AE004469 "Hypothetical, unclassified, unknown" Class 4 PA0316_serA_at 1.1.1.95 D-3-phosphoglycerate dehydrogenase PA0316 2-Hacid_DH_C Pseudomonas PA0316 PA0316 /GENE=serA /DEF=D-3-phosphoglycerate dehydrogenase /FUNCTION=Amino acid biosynthesis and metabolism "16616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // extended:Unknown; 2-Hacid_DH; 7.2e-35" 1.1.1.29 EC:1.1.1.29; DHGY_METEX GLYCERATE DEHYDROGENASE (EC 1.1.1.29) (NADH-DEPENDENT HYDROXYPYRUVATE REDUCTASE) (HPR) (GDH) (HYDROXYPYRUVATE DEHYDROGENASE) (GLYOXYLATE REDUCTASE) (HPR-A).;2e-84 "2-Hacid_DH_C // D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain;1.2e-69 /// 2-Hacid_DH // D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain;7.2e-35 /// ACT // ACT domain;4.1e-08" "d1psda1 // c.2.1.4 // Phosphoglycerate dehydrogenase;2.34e-51 /// d1psda2 // c.23.12.1 // Phosphoglycerate dehydrogenase;4.77e-37 /// d1psda3 // d.58.18.1 // Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain;2.92e-23" 15595513; (NC_002516) D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa];0.0 ; 16272413; (NC_000907) D-3-phosphoglycerate dehydrogenase (serA) [Haemophilus influenzae Rd];e-156 EC:1.1.1.29 // DHGY_METEX GLYCERATE DEHYDROGENASE (EC 1.1.1.29) (NADH-DEPENDENT HYDROXYPYRUVATE REDUCTASE) (HPR) (GDH) (HYDROXYPYRUVATE DEHYDROGENASE) (GLYOXYLATE REDUCTASE) (HPR-A).;1.4e-81 AE004469 80% similar to SerA gene product of E. coli "Glycine, serine and threonine metabolism" Amino acid biosynthesis and metabolism 95236205; 86304370 Class 2 PA0317_at hypothetical protein PA0317 FAD-oxidase_C Pseudomonas PA0317 "PA0317 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 6118 // electron transport // extended:Unknown; FAD_binding_4; 3.5e-66 1.5.3.6 "EC:1.5.3.6; HDNO_ARTOX 6-HYDROXY-D-NICOTINE OXIDASE (EC 1.5.3.6) (6-HDNO).;7.6e-72 ; EC:1.1.2.4; DLD1_YEAST D-LACTATE DEHYDROGENASE [CYTOCHROME], MITOCHONDRIAL PRECURSOR (EC 1.1.2.4) (D-LACTATE FERRICYTOCHROME C OXIDOREDUCTASE) (D-LCR).;5.8e-103 ; EC:2.5.1.26; ADAS_HUMAN ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE PRECURSOR (EC 2.5.1.26) (ALKYL-DHAP SYNTHASE) (ALKYLGLYCERONE-PHOSPHATE SYNTHASE).;6.1e-100 ; EC:1.1.3.8; GGLO_RAT L-GULONOLACTONE OXIDASE (EC 1.1.3.8) (L-GULONO-GAMMA-LACTONE OXIDASE).;1.3e-79" "FAD-oxidase_C // FAD linked oxidases, C-terminal domain;7.1e-81 /// FAD_binding_4 // FAD binding domain;3.5e-66" d1i19a2 // d.145.1.1 // Cholesterol oxidase;1.09e-60 15838796; (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c];e-137 ; 15595514; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 "EC:2.5.1.26 // ADAS_HUMAN ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE PRECURSOR (EC 2.5.1.26) (ALKYL-DHAP SYNTHASE) (ALKYLGLYCERONE-PHOSPHATE SYNTHASE).;4.13e-137 /// EC:1.5.3.6 // HDNO_ARTOX 6-HYDROXY-D-NICOTINE OXIDASE (EC 1.5.3.6) (6-HDNO).;6.38e-106 /// EC:1.1.2.4 // DLD1_YEAST D-LACTATE DEHYDROGENASE [CYTOCHROME], MITOCHONDRIAL PRECURSOR (EC 1.1.2.4) (D-LACTATE FERRICYTOCHROME C OXIDOREDUCTASE) (D-LCR).;6.88e-133 /// EC:1.1.3.8 // GGLO_RAT L-GULONOLACTONE OXIDASE (EC 1.1.3.8) (L-GULONO-GAMMA-LACTONE OXIDASE).;1.67e-109" AE004469 53% similarity to Aip2 gene product of Saccharomyces cerevisiae. "Hypothetical, unclassified, unknown" Class 4 PA0318_at conserved hypothetical protein PA0318 FAA_hydrolase Pseudomonas PA0318 "PA0318 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Putative enzymes" 3824 // catalytic activity // extended:Unknown; FAA_hydrolase; 3.4e-56 4.1.1.77 EC:4.1.1.77; XYLI_PSEPU 4-OXALOCROTONATE DECARBOXYLASE (EC 4.1.1.77) (4-OD).;8.1e-07 FAA_hydrolase // Fumarylacetoacetate (FAA) hydrolase family;3.4e-56 d1i7oa1 // d.177.1.1 // 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE;1.4e-63 16129143; (NC_000913) putative isomerase [Escherichia coli K12];5e-56 ; 15595515; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-126 EC:4.1.1.77 // XYLI_PSEPU 4-OXALOCROTONATE DECARBOXYLASE (EC 4.1.1.77) (4-OD).;2.06e-42 AE004470 "68% similar to putative isomerase [Escherichia coli]. 59% similar to 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Archaeoglobus fulgidus]. 57% similar to 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (hpcE) [Methanococcus jannaschii]" "Hypothetical, unclassified, unknown; Putative enzymes" Class 4 PA0319_at hypothetical protein PA0319 NHL Pseudomonas PA0319 "PA0319 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" NHL // NHL repeat;2e-06 15595516; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15595524; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];9e-55 numtm:1;Nin-prob:0.64893;Type: ;Span:TM from 31 to 50: Eval:0.59496 AE004470 "Hypothetical, unclassified, unknown" Class 4 PA0320_at conserved hypothetical protein PA0320 DUF388 Pseudomonas PA0320 "PA0320 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF388 // Domain unknown function (DUF388);3.7e-60 "15803566; (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7 EDL933];1e-13 ; 15595517; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];3e-60" AE004470 57% similar to hypothetical protein YgiW [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0321_at probable acetylpolyamine aminohydrolase PA0321 Hist_deacetyl Pseudomonas PA0321 PA0321 /DEF=probable acetylpolyamine aminohydrolase /FUNCTION=Putative enzymes Hist_deacetyl // Histone deacetylase family;4.7e-59 d1c3pa_ // c.42.1.2 // HDAC homologue;6.96e-85 15596606; (NC_002516) acetylpolyamine aminohydrolase [Pseudomonas aeruginosa];e-139 ; 15595518; (NC_002516) probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa];0.0 AE004470 67% similar to ACETYLPOLYAMINE AMINOHYDROLASE [Mycoplana ramosa]. Putative enzymes 96422009 Class 3 PA0322_at probable transporter PA0322 aa_permeases Pseudomonas PA0322 PA0322 /DEF=probable transporter /FUNCTION=Membrane proteins; Transport of small molecules 6810 // transport // extended:inferred from electronic annotation; aa_permeases; 7.7e-20 aa_permeases // Amino acid permease;7.7e-20 15598793; (NC_002516) probable amino acid permease [Pseudomonas aeruginosa];e-105 ; 15595519; (NC_002516) probable transporter [Pseudomonas aeruginosa];0.0 numtm:9;Nin-prob:0.68409;Type: ;Span:TM from 30 to 52: Eval:0.79975/TM from 67 to 86: Eval:0.65805/TM from 106 to 128: Eval:0.54874/TM from 143 to 165: Eval:0.48238/TM from 172 to 194: Eval:0.44000/TM from 249 to 271: Eval:0.82862/TM from 346 to 368: Eval:0.52229/TM from 372 to 394: Eval:0.64730/TM from 407 to 424: Eval:0.40418 AE004470 61% similar to putative amino acid/amine transport protein YcjJ [Escherichia coli] Membrane proteins; Transport of small molecules Class 3 PA0323_at probable binding protein component of ABC transporter PA0323 SBP_bac_1 Pseudomonas PA0323 PA0323 /DEF=probable binding protein component of ABC transporter /FUNCTION=Transport of small molecules 5215 // transporter activity // extended:traceable author statement; SBP_bac_1; 1.7e-12 2.5.1.2 EC:2.5.1.2; THI1_PANTH THIAMINASE I PRECURSOR (EC 2.5.1.2) (THIAMINE PYRIDINYLASE).;1.2e-08 SBP_bac_1 // Bacterial extracellular solute-binding protein;1.7e-12 d1a99a_ // c.94.1.1 // Putrescine receptor (PotF);2.59e-97 15595520; (NC_002516) probable binding protein component of ABC transporter [Pseudomonas aeruginosa];0.0 ; 15595400; (NC_002516) probable binding protein component of ABC transporter [Pseudomonas aeruginosa];4e-74 AE004470 52% similar to transport protein PotF [Escherichia coli]. Transport of small molecules Class 3 PA0324_at probable permease of ABC transporter PA0324 BPD_transp Pseudomonas PA0324 PA0324 /DEF=probable permease of ABC transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 3.9e-09 BPD_transp // Binding-protein-dependent transport system inner membrane component;3.9e-09 15595521; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];e-144 ; 15595401; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];7e-76 numtm:7;Nin-prob:0.05945;Type: ;Span:TM from 15 to 37: Eval:0.58992/TM from 68 to 90: Eval:0.93122/TM from 105 to 127: Eval:0.83615/TM from 132 to 154: Eval:0.40613/TM from 179 to 201: Eval:0.82780/TM from 206 to 228: Eval:0.57729/TM from 238 to 257: Eval:0.94242 AE004470 68% similar to spermidine/putrescine transport system permease protein PotC [Escherichia coli]. Membrane proteins; Transport of small molecules Class 3 PA0325_at probable permease of ABC transporter PA0325 BPD_transp Pseudomonas PA0325 PA0325 /DEF=probable permease of ABC transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; BPD_transp; 3.6e-17 BPD_transp // Binding-protein-dependent transport system inner membrane component;3.6e-17 15595522; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];e-177 ; 15595402; (NC_002516) probable permease of ABC transporter [Pseudomonas aeruginosa];2e-86 numtm:6;Nin-prob:0.99998;Type: ;Span:TM from 22 to 44: Eval:0.73071/TM from 95 to 117: Eval:0.64728/TM from 124 to 146: Eval:0.87345/TM from 176 to 198: Eval:0.55624/TM from 223 to 245: Eval:0.79639/TM from 276 to 298: Eval:0.63237 AE004470 63% similar to spermidine/putrescine transport system permease protein PotB [Escherichia coli]. Membrane proteins; Transport of small molecules Class 3 PA0326_at probable ATP-binding component of ABC transporter PA0326 ABC_tran Pseudomonas PA0326 PA0326 /DEF=probable ATP-binding component of ABC transporter /FUNCTION=Transport of small molecules 4009 // ATP-binding cassette (ABC) transporter activity // extended:inferred from electronic annotation; ABC_tran; 7.8e-64 ABC_tran // ABC transporter;7.8e-64 /// TOBE // TOBE domain;6e-10 "d1g2912 // c.37.1.12 // Maltose transport protein MalK, N-terminal domain;9.06e-72" "15595523; (NC_002516) probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa];0.0 ; 13472556; (NC_002678) ABC transporter, ATP-binding component [Mesorhizobium loti];e-110" AE004470 63% similar to Escherichia coli Putrescine transport ATP-binding protein PotG. Transport of small molecules Class 3 PA0327_at hypothetical protein PA0327 Pseudomonas PA0327 "PA0327 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15597213; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];5e-81 ; 15595524; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:1;Nin-prob:0.9833;Type:SIGNAL;Span:TM from 21 to 43: Eval:0.38602 AE004470 "Hypothetical, unclassified, unknown" 95334362 Class 4 PA0328_at hypothetical protein PA0328 Autotransporter Pseudomonas PA0328 "PA0328 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 8233 // peptidase activity // extended:Unknown; Peptidase_M28; 4.7e-09 2.3.2.5 EC:2.3.2.5; QPCT_HUMAN GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE PRECURSOR (EC 2.3.2.5) (QC) (GLUTAMINYL-TRNA CYCLOTRANSFERASE) (GLUTAMINYL CYCLASE).;4.7e-20 Peptidase_M28 // Peptidase family M28;4.7e-09 /// Autotransporter // Autotransporter beta-domain;1.1e-52 d1qq9a_ // c.56.5.4 // Aminopeptidase;8.9e-38 15595525; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 10945105; (AJ277639) PapB protein [Pseudomonas aeruginosa];0.0 EC:2.3.2.5 // QPCT_HUMAN GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE PRECURSOR (EC 2.3.2.5) (QC) (GLUTAMINYL-TRNA CYCLOTRANSFERASE) (GLUTAMINYL CYCLASE).;5.47e-56 /// EC:3.4.21.72 // IGA_NEIGO IGA-SPECIFIC SERINE ENDOPEPTIDASE PRECURSOR (EC 3.4.21.72) (IGA PROTEASE).;3.63e-33 /// EC:3.4.11.10 // AMPX_VIBPR BACTERIAL LEUCYL AMINOPEPTIDASE PRECURSOR (EC 3.4.11.10).;3.64e-17 AE004470 "Hypothetical, unclassified, unknown" 92268080 Class 4 PA0329_at conserved hypothetical protein PA0329 Pseudomonas PA0329 "PA0329 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595526; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];5e-57 ; 7388497; Hypothetical protein yegP;1e-22 AE004471 67% similar to hypothetical protein (b2080)[Escherichia coli] and 62% similar to Orf117 [Pseudomonas stutzeri] "Hypothetical, unclassified, unknown" Class 4 PA0330_rpiA_at 5.3.1.6 ribose 5-phosphate isomerase PA0330 Pseudomonas PA0330 PA0330 /GENE=rpiA /DEF=ribose 5-phosphate isomerase /FUNCTION=Energy metabolism 5.3.1.6 EC:5.3.1.6; RPIA_HUMAN RIBOSE 5-PHOSPHATE ISOMERASE (EC 5.3.1.6) (PHOSPHORIBOISOMERASE) (FRAGMENT).;9.1e-33 Rib_5-P_isom_A // Ribose 5-phosphate isomerase A (phosphoriboisomerase A);6.7e-95 "d1ks2a1 // c.35.1.2 // D-ribose-5-phosphate isomerase (RpiA), catalytic domain;1.87e-45 /// d1ks2a2 // d.58.40.1 // D-ribose-5-phosphate isomerase (RpiA), lid domain;3.91e-24" 6226031; Ribose 5-phosphate isomerase A (Phosphoriboisomerase A);2e-77 ; 15595527; (NC_002516) ribose 5-phosphate isomerase [Pseudomonas aeruginosa];e-121 EC:5.3.1.6 // RPIA_HUMAN RIBOSE 5-PHOSPHATE ISOMERASE (EC 5.3.1.6) (PHOSPHORIBOISOMERASE) (FRAGMENT).;6.49e-37 AE004471 78% similar to rpiA gene product of [E. coli] Carbon fixation; Pentose phosphate cycle Energy metabolism 92011350 Class 2 PA0331_ilvA1_at 4.2.1.16 "threonine dehydratase, biosynthetic" PA0331 Thr_dehydrat_C Pseudomonas PA0331 "PA0331 /GENE=ilvA1 /DEF=threonine dehydratase, biosynthetic /FUNCTION=Amino acid biosynthesis and metabolism" 16829 // lyase activity // extended:Unknown; PALP; 1.8e-104 4.2.1.16 EC:4.2.1.16; Y4TJ_RHISN PUTATIVE THREONINE DEHYDRATASE (EC 4.2.1.16) (THREONINE DEAMINASE).;3.8e-93 ; EC:4.1.99.4; 1A1D_THEMA PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (EC 4.1.99.4) (ACC DEAMINASE).;1.4e-90 ; EC:4.2.99.8; Y4XP_RHISN PUTATIVE CYSTEINE SYNTHASE (EC 4.2.99.8) (O-ACETYLSERINE SULFHYDRYLASE) (O-ACETYLSERINE (THIOL)-LYASE) (CSASE).;4.4e-94 Thr_dehydrat_C // C-terminal regulatory domain of Threonine dehydratase;8.2e-68 /// PALP // Pyridoxal-phosphate dependent enzyme;1.8e-104 d1tdj_1 // c.79.1.1 // Allosteric threonine deaminase N-terminal domain;5.53e-105 /// d1tdj_2 // d.58.18.2 // Allosteric threonine deaminase C-terminal domain;2.67e-32 "15596523; (NC_002516) threonine dehydratase, biosynthetic [Pseudomonas aeruginosa];0.0 ; 15595528; (NC_002516) threonine dehydratase, biosynthetic [Pseudomonas aeruginosa];0.0" EC:4.2.1.16 // Y4TJ_RHISN PUTATIVE THREONINE DEHYDRATASE (EC 4.2.1.16) (THREONINE DEAMINASE).;2.35e-105 /// EC:4.2.99.8 // Y4XP_RHISN PUTATIVE CYSTEINE SYNTHASE (EC 4.2.99.8) (O-ACETYLSERINE SULFHYDRYLASE) (O-ACETYLSERINE (THIOL)-LYASE) (CSASE).;6.37e-101 /// EC:4.1.99.4 // 1A1D_THEMA PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (EC 4.1.99.4) (ACC DEAMINASE).;2.11e-97 AE004471 70% similar to threonine deaminase IlvA [Escherichia coli]. "Glycine, serine and threonine metabolism" Amino acid biosynthesis and metabolism Class 2 PA0332_at hypothetical protein PA0332 Pseudomonas PA0332 "PA0332 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595529; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];7e-86 ; 16127128; (NC_002696) hypothetical protein [Caulobacter crescentus CB15];8e-13 numtm:4;Nin-prob:0.00059;Type: ;Span:TM from 10 to 29: Eval:0.94548/TM from 50 to 72: Eval:0.77578/TM from 82 to 101: Eval:0.68519/TM from 129 to 151: Eval:0.80498 AE004471 "Hypothetical, unclassified, unknown" Class 4 PA0333_at hypothetical protein PA0333 Pseudomonas PA0333 PA0333 /DEF=hypothetical protein /FUNCTION=Putative enzymes 4.2.1.46 "EC:4.2.1.46; STRE_STRGR DTDP-GLUCOSE 4,6-DEHYDRATASE (EC 4.2.1.46).;4.2e-28 ; EC:1.1.1.219; DFRA_VITVI DIHYDROFLAVONOL-4-REDUCTASE (EC 1.1.1.219) (DFR) (DIHYDROKAEMPFEROL 4- REDUCTASE).;1.1e-25 ; EC:1.3.1.24; FLRE_HUMAN FLAVIN REDUCTASE (EC 1.6.99.1) (FR) (NADPH-DEPENDENT DIAPHORASE) (NADPH-FLAVIN REDUCTASE) (FLR) (BILIVERDIN REDUCTASE B) (EC 1.3.1.24) (BVR-B) (BILIVERDIN-IX BETA-REDUCTASE) (GREEN HEME BINDING PROTEIN) (GHBP).;8.5e-21" d1hdoa_ // c.2.1.2 // Biliverdin IX beta reductase;1.02e-21 16264149; (NC_003078) putative oxidoreductase protein [Sinorhizobium meliloti];8e-35 ; 15595530; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:4;Nin-prob:0.79585;Type: ;Span:TM from 302 to 324: Eval:0.96897/TM from 339 to 361: Eval:0.85057/TM from 368 to 390: Eval:0.78418/TM from 394 to 413: Eval:0.66377 "EC:1.1.1.219 // DFRA_VITVI DIHYDROFLAVONOL-4-REDUCTASE (EC 1.1.1.219) (DFR) (DIHYDROKAEMPFEROL 4- REDUCTASE).;2.57e-32 /// EC:1.3.1.24 // FLRE_HUMAN FLAVIN REDUCTASE (EC 1.6.99.1) (FR) (NADPH-DEPENDENT DIAPHORASE) (NADPH-FLAVIN REDUCTASE) (FLR) (BILIVERDIN REDUCTASE B) (EC 1.3.1.24) (BVR-B) (BILIVERDIN-IX BETA-REDUCTASE) (GREEN HEME BINDING PROTEIN) (GHBP).;1.91e-23 /// EC:4.2.1.46 // STRE_STRGR DTDP-GLUCOSE 4,6-DEHYDRATASE (EC 4.2.1.46).;2.39e-29 /// EC:5.1.3.12 // LPSL_RHIME UDP-GLUCURONATE 5-EPIMERASE (EC 5.1.3.12) (UDP-GLUCURONIC ACID EPIMERASE).;2.47e-26" AE004471 44% similar to putative epimerase/dehydratase WbiG [Burkholderia pseudomallei]. Putative enzymes Class 4 PA0334_at probable MFS transporter PA0334 Pseudomonas PA0334 PA0334 /DEF=probable MFS transporter /FUNCTION=Membrane proteins; Transport of small molecules 15595531; (NC_002516) probable MFS transporter [Pseudomonas aeruginosa];0.0 ; 15613035; (NC_002570) BH0472~unknown conserved protein [Bacillus halodurans];e-101 numtm:10;Nin-prob:0.71147;Type: ;Span:TM from 13 to 35: Eval:0.61798/TM from 45 to 67: Eval:0.36059/TM from 80 to 102: Eval:0.54006/TM from 108 to 130: Eval:0.49332/TM from 143 to 165: Eval:0.96405/TM from 219 to 241: Eval:0.62724/TM from 292 to 309: Eval:0.76862/TM from 314 to 336: Eval:0.45045/TM from 351 to 373: Eval:0.50286/TM from 380 to 399: Eval:0.81463 AE004471 40% similar to tetracycline resistance protein [E. coli] Membrane proteins; Transport of small molecules Class 3 PA0335_at hypothetical protein PA0335 Hydrolase Pseudomonas PA0335 "PA0335 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16787 // hydrolase activity // extended:Unknown; Hydrolase; 0.0089 Hydrolase // haloacid dehalogenase-like hydrolase;0.0089 d1j97a_ // c.108.1.4 // Phosphoserine phosphatase;5.39e-30 15676959; (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58];4e-50 ; 15595532; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-123 EC:3.1.3.3 // SERB_HUMAN L-3-PHOSPHOSERINE PHOSPHATASE (EC 3.1.3.3) (PSP) (O-PHOSPHOSERINE PHOSPHOHYDROLASE) (PSPASE).;4.45e-15 AE004471 52% similar to hypothetical protein Rv3661 [Mycobacterium tuberculosis]. "Hypothetical, unclassified, unknown" Class 4 PA0336_at conserved hypothetical protein PA0336 NUDIX Pseudomonas PA0336 "PA0336 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3.6.1.17 "EC:3.6.1.17; AP4A_HUMAN BIS(5-NUCLEOSYL)-TETRAPHOSPHATASE (ASYMMETRICAL) (EC 3.6.1.17) (DIADENOSINE 5,5-P1,P4-TETRAPHOSPHATE ASYMMETRICAL HYDROLASE) (DIADENOSINE TETRAPHOSPHATASE) (AP4A HYDROLASE) (AP4AASE).;8.9e-16" NUDIX // NUDIX domain;3.9e-27 d1jkna_ // d.113.1.1 // Diadenosine tetraphosphate hydrolase (Ap4A hydrolase);7.15e-34 15595533; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];5e-91 ; 15803349; (NC_002655) putative invasion protein [Escherichia coli O157:H7 EDL933];5e-60 "EC:3.6.1.17 // AP4A_HUMAN BIS(5-NUCLEOSYL)-TETRAPHOSPHATASE (ASYMMETRICAL) (EC 3.6.1.17) (DIADENOSINE 5,5-P1,P4-TETRAPHOSPHATE ASYMMETRICAL HYDROLASE) (DIADENOSINE TETRAPHOSPHATASE) (AP4A HYDROLASE) (AP4AASE).;3.03e-27" AE004471 82% similar to putative invasion protein YgdP [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0337_ptsP_at 2.7.3.9 phosphoenolpyruvate-protein phosphotransferase PtsP PA0337 PEP-utilizers Pseudomonas PA0337 PA0337 /GENE=ptsP /DEF=phosphoenolpyruvate-protein phosphotransferase PtsP /FUNCTION=Transport of small molecules 2.7.9.2 "EC:2.7.9.2; PPSA_SYNY3 PHOSPHOENOLPYRUVATE SYNTHASE (EC 2.7.9.2) (PYRUVATE,WATER DIKINASE) (PEP SYNTHASE).;4.6e-161 ; EC:2.7.3.9; YPDD_ECOLI PUTATIVE PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE YPDD (EC 2.7.3.9) (PHOSPHOTRANSFERASE SYSTEM, ENZYME I).;8.5e-184" "PEP-utilizers_C // PEP-utilising enzyme, TIM barrel domain;4.1e-128 /// PEP-utilisers_N // PEP-utilising enzyme, N-terminal;1.2e-50 /// PEP-utilizers // PEP-utilising enzyme, mobile domain;3.6e-23 /// GAF // GAF domain;1.7e-29" "d1zyma1 // a.60.10.1 // Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain;1.31e-26 /// d1zyma2 // c.8.1.2 // N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system;9.24e-19 /// d1h6za1 // c.1.12.2 // Pyruvate phosphate dikinase, C-terminal domain;4.24e-102" 3641832; (Y14681) enzyme I [Azotobacter vinelandii];0.0 ; 15595534; (NC_002516) phosphoenolpyruvate-protein phosphotransferase PtsP [Pseudomonas aeruginosa];0.0 "EC:2.7.9.2 // PPSA_SYNY3 PHOSPHOENOLPYRUVATE SYNTHASE (EC 2.7.9.2) (PYRUVATE,WATER DIKINASE) (PEP SYNTHASE).;1.49e-175 /// EC:2.7.3.9 // YPDD_ECOLI PUTATIVE PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE YPDD (EC 2.7.3.9) (PHOSPHOTRANSFERASE SYSTEM, ENZYME I).;1.28e-191" AE004471 92% similar to enzyme I [Azotobacter vinelandii] and 61% similar to PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE PTSP [Escherichia coli] Transport of small molecules 97128775 Class 2 PA0338_at hypothetical protein PA0338 PAC Pseudomonas PA0338 "PA0338 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "6355 // regulation of transcription, DNA-dependent // extended:Unknown; PAC; 0.00026" PAC // PAC motif;0.00026 /// GGDEF // GGDEF domain;3.6e-54 16331091; (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803];3e-38 ; 15595535; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004471 C-terminal half 50% similar to pleD gene product of [Synechocystis sp.] and other putative signal transducers. "Hypothetical, unclassified, unknown" Class 4 PA0339_at hypothetical protein PA0339 Pseudomonas PA0339 "PA0339 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF833 // Protein of unknown function (DUF833);7.7e-133 15595536; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-144 ; 15614290; (NC_002570) BH1727~unknown conserved protein in others [Bacillus halodurans];4e-44 AE004471 "Hypothetical, unclassified, unknown" Class 4 PA0340_at conserved hypothetical protein PA0340 DUF81 Pseudomonas PA0340 "PA0340 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" DUF81 // Domain of unknown function DUF81;2e-46 15595537; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-149 ; 15640692; (NC_002505) conserved hypothetical protein [Vibrio cholerae];4e-55 numtm:7;Nin-prob:0.9557;Type: ;Span:TM from 13 to 35: Eval:0.36744/TM from 45 to 67: Eval:0.65263/TM from 79 to 101: Eval:0.64019/TM from 145 to 167: Eval:0.43124/TM from 180 to 199: Eval:0.47326/TM from 209 to 231: Eval:0.57308/TM from 243 to 265: Eval:0.66589 AE004472 57% similar to H. influenzae hypothetical protein HI0902. "Hypothetical, unclassified, unknown; Membrane proteins" 95350630 Class 4 PA0341_lgt_at 2.4.99.- prolipoprotein diacylglyceryl transferase PA0341 LGT Pseudomonas PA0341 "PA0341 /GENE=lgt /DEF=prolipoprotein diacylglyceryl transferase /FUNCTION=Fatty acid and phospholipid metabolism; Translation, post-translational modification, degradation" 16740 // transferase activity // extended:Unknown; LGT; 4e-144 LGT // Prolipoprotein diacylglyceryl transferase;4e-144 15640693; (NC_002505) prolipoprotein diacylglyceryl transferase [Vibrio cholerae];5e-96 ; 15595538; (NC_002516) prolipoprotein diacylglyceryl transferase [Pseudomonas aeruginosa];e-160 numtm:6;Nin-prob:0.01065;Type: ;Span:TM from 20 to 37: Eval:0.64143/TM from 56 to 75: Eval:0.94200/TM from 95 to 112: Eval:0.96649/TM from 119 to 141: Eval:0.81669/TM from 173 to 192: Eval:0.58160/TM from 234 to 256: Eval:0.44542 AE004472 67% similar to E. coli lgt gene product. "Fatty acid and phospholipid metabolism; Translation, post-translational modification, degradation" 96074310 Class 2 PA0342_thyA_at 2.1.1.45 thymidylate synthase PA0342 thymidylat_synt Pseudomonas PA0342 "PA0342 /GENE=thyA /DEF=thymidylate synthase /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers; Nucleotide biosynthesis and metabolism" 4799 // thymidylate synthase activity // extended:inferred from electronic annotation; 2.1.1.45; 1.26e-128 /// 4799 // thymidylate synthase activity // extended:inferred from electronic annotation; thymidylat_synt; 3.4e-180 2.1.1.45 EC:2.1.1.45; TYSY_HUMAN THYMIDYLATE SYNTHASE (EC 2.1.1.45) (TS).;8.7e-123 ; EC:2.1.2.8; DCHM_BPT6 DEOXYCYTIDYLATE HYDROXYMETHYLTRANSFERASE (EC 2.1.2.8) (DEOXYCYTIDYLATE HYDROXYMETHYLASE) (DCMP HYDROXYMETHYLASE).;6.7e-100 thymidylat_synt // Thymidylate synthase;3.4e-180 d1qqqa_ // d.117.1.1 // Thymidylate synthase;1.5e-126 15595539; (NC_002516) thymidylate synthase [Pseudomonas aeruginosa];e-159 ; 15677556; (NC_003112) thymidylate synthase [Neisseria meningitidis MC58];e-130 EC:2.1.1.45 // TYSY_HUMAN THYMIDYLATE SYNTHASE (EC 2.1.1.45) (TS).;1.26e-128 /// EC:2.1.2.8 // DCHM_BPT6 DEOXYCYTIDYLATE HYDROXYMETHYLTRANSFERASE (EC 2.1.2.8) (DEOXYCYTIDYLATE HYDROXYMETHYLASE) (DCMP HYDROXYMETHYLASE).;5.96e-105 AE004472 83% similar to E. coli thymidylate synthase. Folate biosynthesis; One carbon pool by folate; Pyrimidine metabolism "Biosynthesis of cofactors, prosthetic groups and carriers; Nucleotide biosynthesis and metabolism" 95223798 Class 2 PA0343_at hypothetical protein PA0343 Pseudomonas PA0343 "PA0343 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15837209; (NC_002488) hypothetical protein [Xylella fastidiosa 9a5c];8e-46 ; 15595540; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-157 AE004472 45% similar to a region of hypothetical protein [Synechocystis sp.]. "Hypothetical, unclassified, unknown" Class 4 PA0344_at hypothetical protein PA0344 Pseudomonas PA0344 "PA0344 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1h65a_ // c.37.1.8 // Chloroplast protein translocon GTPase Toc34;1.68e-14 15595541; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15677493; (NC_003112) hypothetical protein [Neisseria meningitidis MC58];1e-84 AE004472 "Hypothetical, unclassified, unknown" Class 4 PA0345_at hypothetical protein PA0345 Pseudomonas PA0345 "PA0345 /DEF=hypothetical protein /FUNCTION=Membrane proteins; Hypothetical, unclassified, unknown" 15595542; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15794784; (NC_003116) putative integral membrane protein [Neisseria meningitidis Z2491];9e-35 numtm:4;Nin-prob:0.5048;Type: ;Span:TM from 74 to 96: Eval:0.63631/TM from 106 to 128: Eval:0.48578/TM from 176 to 198: Eval:0.35417/TM from 257 to 279: Eval:0.56942 AE004472 41% similar to putative membrane protein [Synechococcus PCC7942]. "Membrane proteins; Hypothetical, unclassified, unknown" Class 4 PA0346_at hypothetical protein PA0346 Pseudomonas PA0346 "PA0346 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595543; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];9e-66 AE004472 "Hypothetical, unclassified, unknown" Class 4 PA0347_glpQ_at 3.1.4.2 "glycerophosphoryl diester phosphodiesterase, periplasmic" PA0347 GDPD Pseudomonas PA0347 "PA0347 /GENE=glpQ /DEF=glycerophosphoryl diester phosphodiesterase, periplasmic /FUNCTION=Fatty acid and phospholipid metabolism" 8889 // glycerophosphodiester phosphodiesterase activity // extended:inferred from electronic annotation; GDPD; 2.5e-49 3.1.4.46 EC:3.1.4.46; UGPQ_ECOLI GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE (EC 3.1.4.46) (GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE).;8.7e-42 GDPD // Glycerophosphoryl diester phosphodiesterase family;2.5e-49 "16127502; (NC_002696) glycerophosphoryl diester phosphodiesterase [Caulobacter crescentus CB15];7e-86 ; 15595544; (NC_002516) glycerophosphoryl diester phosphodiesterase, periplasmic [Pseudomonas aeruginosa];0.0" EC:3.1.4.46 // UGPQ_ECOLI GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE (EC 3.1.4.46) (GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE).;4.2e-57 AE004472 52% similar to GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE PERIPLASMIC PRECURSOR [Escherichia coli] Glycerolipid metabolism; Phospholipid degradation Fatty acid and phospholipid metabolism 91238712 Class 2 PA0348_at hypothetical protein PA0348 Pseudomonas PA0348 "PA0348 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF811 // Domain of unknown function (DUF811);4.1e-186 15595546; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-25 ; 15595545; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004472 "Hypothetical, unclassified, unknown" Class 4 PA0349_at hypothetical protein PA0349 Pseudomonas PA0349 "PA0349 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" DUF811 // Domain of unknown function (DUF811);5.6e-195 15595546; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15595545; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-25 AE004472 "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0350_folA_at 1.5.1.3 dihydrofolate reductase PA0350 DiHfolate_red Pseudomonas PA0350 "PA0350 /GENE=folA /DEF=dihydrofolate reductase /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 4146 // dihydrofolate reductase activity // extended:traceable author statement; DiHfolate_red; 3.7e-68 1.5.1.3 EC:1.5.1.3; DYR_HUMAN DIHYDROFOLATE REDUCTASE (EC 1.5.1.3).;3.5e-50 DiHfolate_red // Dihydrofolate reductase;3.7e-68 "d1ra9__ // c.71.1.1 // Dihydrofolate reductase, prokaryotic type;7.79e-51" 15595547; (NC_002516) dihydrofolate reductase [Pseudomonas aeruginosa];3e-92 ; 118971; DIHYDROFOLATE REDUCTASE TYPE III;9e-40 EC:1.5.1.3 // DYR_HUMAN DIHYDROFOLATE REDUCTASE (EC 1.5.1.3).;1.07e-55 AE004473 61% similar to dihydrofolate reductase type I [Escherichia coli] Folate biosynthesis; One carbon pool by folate "Biosynthesis of cofactors, prosthetic groups and carriers" 91152037 Class 2 PA0351_at conserved hypothetical protein PA0351 Metallophos Pseudomonas PA0351 "PA0351 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16787 // hydrolase activity // extended:Unknown; Metallophos; 1.3e-05 Metallophos // Calcineurin-like phosphoesterase;1.3e-05 15595548; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];2e-85 ; 15679762; (NC_000916) conserved protein [Methanothermobacter thermautotrophicus];8e-17 AE004473 57% similar to conserved protein [Methanobacterium thermoautotrophicum] "Hypothetical, unclassified, unknown" Class 4 PA0352_at probable transporter PA0352 xan_ur_permease Pseudomonas PA0352 PA0352 /DEF=probable transporter /FUNCTION=Membrane proteins; Transport of small molecules 5215 // transporter activity // extended:traceable author statement; xan_ur_permease; 5.2e-130 xan_ur_permease // Permease family;5.2e-130 15642706; (NC_002505) xanthine/uracil permease family protein [Vibrio cholerae];e-145 ; 15595549; (NC_002516) probable transporter [Pseudomonas aeruginosa];0.0 numtm:9;Nin-prob:0.12849;Type: ;Span:TM from 28 to 50: Eval:0.92197/TM from 85 to 107: Eval:0.80268/TM from 122 to 144: Eval:0.67128/TM from 151 to 173: Eval:0.80861/TM from 193 to 212: Eval:0.69372/TM from 261 to 280: Eval:0.49222/TM from 343 to 365: Eval:0.80413/TM from 375 to 394: Eval:0.87426/TM from 401 to 423: Eval:0.48118 AE004473 75% similar to putative transport protein YicE [Escherichia coli] Membrane proteins; Transport of small molecules 91203811 Class 3 PA0353_ilvD_at 4.2.1.9 dihydroxy-acid dehydratase PA0353 ILVD_EDD Pseudomonas PA0353 "PA0353 /GENE=ilvD /DEF=dihydroxy-acid dehydratase /FUNCTION=Amino acid biosynthesis and metabolism; Biosynthesis of cofactors, prosthetic groups and carriers" 3824 // catalytic activity // extended:Unknown; ILVD_EDD; 0 /// 4160 // dihydroxy-acid dehydratase activity // extended:inferred from sequence similarity; 4.2.1.9; 3.24e-208 4.2.1.12 EC:4.2.1.12; EDD_ZYMMO PHOSPHOGLUCONATE DEHYDRATASE (EC 4.2.1.12) (6-PHOSPHOGLUCONATE DEHYDRATASE).;4.5e-219 ; EC:4.2.1.9; ILVD_THEMA DIHYDROXY-ACID DEHYDRATASE (EC 4.2.1.9) (DAD).;8.7e-217 ILVD_EDD // Dehydratase family;0 15595550; (NC_002516) dihydroxy-acid dehydratase [Pseudomonas aeruginosa];0.0 ; 15836704; (NC_002488) dihydroxy-acid dehydratase [Xylella fastidiosa 9a5c];0.0 EC:4.2.1.9 // ILVD_THEMA DIHYDROXY-ACID DEHYDRATASE (EC 4.2.1.9) (DAD).;3.24e-208 AE004473 83% similar to dihydroxy-acid dehydrase [Escherichia coli] "Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis" "Amino acid biosynthesis and metabolism; Biosynthesis of cofactors, prosthetic groups and carriers" 88056322 Class 2 PA0354_at conserved hypothetical protein PA0354 Pseudomonas PA0354 "PA0354 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1dusa_ // c.66.1.4 // Hypothetical protein MJ0882;6.2e-27 15644445; (NC_000853) conserved hypothetical protein [Thermotoga maritima];1e-58 ; 15595551; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 EC:2.1.1.104 // CAMT_VITVI CAFFEOYL-COA O-METHYLTRANSFERASE (EC 2.1.1.104) (TRANS-CAFFEOYL-COA 3-O-METHYLTRANSFERASE) (CCOAMT) (CCOAOMT).;5.97e-14 AE004473 57% similar to (AP000007) hypothetical protein [Pyrococcus horikoshii] "Hypothetical, unclassified, unknown" Class 4 PA0355_pfpI_at protease PfpI PA0355 DJ-1_PfpI Pseudomonas PA0355 "PA0355 /GENE=pfpI /DEF=protease PfpI /FUNCTION=Translation, post-translational modification, degradation" DJ-1_PfpI // DJ-1/PfpI family;2.2e-41 d1g2ia_ // c.23.16.2 // Intracellular protease;2.14e-42 15595552; (NC_002516) protease PfpI [Pseudomonas aeruginosa];3e-99 ; 15806218; (NC_001263) protease I [Deinococcus radiodurans];6e-40 AE004473 64% similar to intracellular proteinase I [Pyrococcus furiosus] "Translation, post-translational modification, degradation" Class 2 PA0356_at hypothetical protein PA0356 Pseudomonas PA0356 "PA0356 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15639067; (NC_000919) T. pallidum predicted coding region TP0073 [Treponema pallidum];7e-19 ; 15595553; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-157 AE004473 "Hypothetical, unclassified, unknown" Class 4 PA0357_mutM_at 3.2.2.23 formamidopyrimidine-DNA glycosylase PA0357 Fapy_DNA_glyco Pseudomonas PA0357 "PA0357 /GENE=mutM /DEF=formamidopyrimidine-DNA glycosylase /FUNCTION=DNA replication, recombination, modification and repair" 6281 // DNA repair // extended:Unknown; Fapy_DNA_glyco; 4.2e-115 8534 // purine-specific oxidized base lesion DNA N-glycosylase activity // extended:Unknown; 3.2.2.23; 8e-96 3.2.2.23 EC:3.2.2.23; FPG_ZYMMO FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (EC 3.2.2.23) (FAPY-DNA GLYCOSYLASE).;2.4e-83 Fapy_DNA_glyco // Formamidopyrimidine-DNA glycosylase;4.2e-115 d1k82a_ // e.14.1.1 // DNA repair protein MutM (Fpg);1.71e-93 15595554; (NC_002516) formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa];e-153 ; 15836676; (NC_002488) formamidopyrimidine DNA glycosylase [Xylella fastidiosa 9a5c];2e-80 EC:3.2.2.23 // FPG_ZYMMO FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (EC 3.2.2.23) (FAPY-DNA GLYCOSYLASE).;8e-96 AE004473 71% similar to formamidopyrimidine-DNA glycosylase [Escherichia coli]. "DNA replication, recombination, modification and repair" 93232071 Class 2 PA0358_at hypothetical protein PA0358 Acyltransferase Pseudomonas PA0358 "PA0358 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 8415 // acyltransferase activity // extended:Unknown; Acyltransferase; 4.8e-13 Acyltransferase // Acyltransferase;4.8e-13 16126143; (NC_002696) acyltransferase family protein [Caulobacter crescentus CB15];1e-37 ; 15595555; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-114 EC:2.3.1.51 // PLCB_HUMAN 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE BETA (EC 2.3.1.51) (1- AGP ACYLTRANSFERASE 2) (1-AGPAT 2) (LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE-BETA) (LPAAT-BETA) (1-ACYLGLYCEROL-3-PHOSPHATE O- ACYLTRANSFERASE 2).;8.6e-18 AE004473 "Hypothetical, unclassified, unknown" Class 4 PA0359_at hypothetical protein PA0359 Pseudomonas PA0359 "PA0359 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595556; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];8e-59 numtm:1;Nin-prob:0.84067;Type:SIGNAL;Span:TM from 51 to 73: Eval:0.93044 AE004473 "Hypothetical, unclassified, unknown" Class 4 PA0360_at hypothetical protein PA0360 Pseudomonas PA0360 "PA0360 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595557; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15676331; (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58];5e-24 AE004474 "Hypothetical, unclassified, unknown" Class 4 PA0361_at 2.3.2.2 probable gamma-glutamyltranspeptidase precursor PA0361 G_glu_transpept Pseudomonas PA0361 PA0361 /DEF=probable gamma-glutamyltranspeptidase precursor /FUNCTION=Amino acid biosynthesis and metabolism 3840 // gamma-glutamyl transferase activity // extended:inferred from electronic annotation; G_glu_transpept; 3.9e-224 G_glu_transpept // Gamma-glutamyltranspeptidase;3.9e-224 15595558; (NC_002516) probable gamma-glutamyltranspeptidase precursor [Pseudomonas aeruginosa];0.0 ; 15837586; (NC_002488) gamma-glutamyltranspeptidase [Xylella fastidiosa 9a5c];e-121 AE004474 55% similar to gamma-Glu transpeptidase [Pseudomonas sp.] and 51% similar to gamma-glutamyltranspeptidase [Escherichia coli] Glutathione metabolism Amino acid biosynthesis and metabolism 97018223; 93305254; 93051253; 96362161 Class 3 PA0362_fdx1_at ferredoxin [4Fe-4S] PA0362 fer4 Pseudomonas PA0362 PA0362 /GENE=fdx1 /DEF=ferredoxin [4Fe-4S] /FUNCTION=Energy metabolism 5489 // electron transporter activity // extended:Unknown; fer4; 1.7e-05 fer4 // 4Fe-4S binding domain;4.4e-06 d1blu__ // d.58.1.1 // Ferredoxin II;3.31e-18 "15595559; (NC_002516) ferredoxin [4Fe-4S [Pseudomonas aeruginosa];8e-47 ; 15676051; (NC_003112) ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis MC58];4e-34" AE004474 85% similar to ferredoxin [Chromatium vinosum] Energy metabolism 97035244 Class 2 PA0363_coaD_at phosphopantetheine adenylyltransferase PA0363 CTP_transf_2 Pseudomonas PA0363 PA0363 /GENE=coaD /DEF=phosphopantetheine adenylyltransferase /FUNCTION=Central intermediary metabolism 16779 // nucleotidyltransferase activity // extended:Unknown; CTP_transf_2; 1.5e-40 /// 4595 // pantotheine-phosphate adenylyltransferase activity // extended:inferred from electronic annotation; 2.7.7.3; 3.59e-57 2.7.7.3 EC:2.7.7.3; COAD_ZYMMO PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE (EC 2.7.7.3) (PANTETHEINE- PHOSPHATE ADENYLYLTRANSFERASE) (PPAT) (DEPHOSPHO-COA PYROPHOSPHORYLASE).;1e-53 CTP_transf_2 // Cytidylyltransferase;1.5e-40 d1qjca_ // c.26.1.3 // Phosphopantetheine adenylyltransferase;1.71e-53 8469201; Phosphopantetheine adenylyltransferase (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase);6e-53 ; 15595560; (NC_002516) phosphopantetheine adenylyltransferase [Pseudomonas aeruginosa];3e-85 EC:6.2.1.22 // CITC_LEUMC [CITRATE [PRO-3S]-LYASE] LIGASE (EC 6.2.1.22) (CITRATE LYASE SYNTHETASE) (ACETATE:SH-CITRATE LYASE LIGASE).;2.17e-59 /// EC:2.7.7.3 // COAD_ZYMMO PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE (EC 2.7.7.3) (PANTETHEINE- PHOSPHATE ADENYLYLTRANSFERASE) (PPAT) (DEPHOSPHO-COA PYROPHOSPHORYLASE).;3.59e-57 AE004474 80% similar to kdtB gene product of [E. coli] Pantothenate and CoA biosynthesis Central intermediary metabolism 91236744; 92250420 Class 2 PA0364_at probable oxidoreductase PA0364 GMC_oxred Pseudomonas PA0364 PA0364 /DEF=probable oxidoreductase /FUNCTION=Putative enzymes 16491 // oxidoreductase activity // extended:Unknown; GMC_oxred_N; 5.6e-08 GMC_oxred_C // GMC oxidoreductase;5e-05 /// GMC_oxred_N // GMC oxidoreductase;5.6e-08 d3cox_1 // c.3.1.2 // Cholesterol oxidase;3.21e-75 14532706; (AY039977) unknown protein [Arabidopsis thaliana];1e-49 ; 15595561; (NC_002516) probable oxidoreductase [Pseudomonas aeruginosa];0.0 EC:1.1.3.6 // CHOD_STRSQ CHOLESTEROL OXIDASE PRECURSOR (EC 1.1.3.6) (CHOD).;1.42e-117 AE004474 44% similar to hypothetical oxidoreductaseY4NJ of [Rhizobium sp. NGR234] Putative enzymes Class 3 PA0365_at hypothetical protein PA0365 Pseudomonas PA0365 "PA0365 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 15595562; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-101 AE004474 "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0366_at probable aldehyde dehydrogenase PA0366 aldedh Pseudomonas PA0366 PA0366 /DEF=probable aldehyde dehydrogenase /FUNCTION=Putative enzymes 16491 // oxidoreductase activity // extended:Unknown; aldedh; 2.6e-117 1.5.1.12 "EC:1.5.1.12; PUT2_HUMAN DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE PRECURSOR (EC 1.5.1.12) (P5C DEHYDROGENASE).;8.7e-110 ; EC:1.2.1.27; MMSA_HUMAN METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL PRECURSOR (EC 1.2.1.27) (MMSDH).;2e-111 ; EC:1.2.1.5; DHAP_HUMAN ALDEHYDE DEHYDROGENASE, DIMERIC NADP-PREFERRING (EC 1.2.1.5) (ALDH CLASS 3).;2.9e-102" aldedh // Aldehyde dehydrogenase family;2.6e-117 "d1ad3a_ // c.82.1.1 // Aldehyde reductase (dehydrogenase), ALDH;2.4e-113" 15595563; (NC_002516) probable aldehyde dehydrogenase [Pseudomonas aeruginosa];0.0 ; 10945819; (AF193866) aldehyde dehydrogenase [Alcanivorax borkumensis];e-165 "EC:1.5.99.8 // PUTA_SALTY BIFUNCTIONAL PUTA PROTEIN [INCLUDES: PROLINE DEHYDROGENASE (EC 1.5.99.8) (PROLINE OXIDASE) DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE (EC 1.5.1.12) (P5C DEHYDROGENASE)].;1.25e-147 /// EC:1.2.1.5 // DHAP_HUMAN ALDEHYDE DEHYDROGENASE, DIMERIC NADP-PREFERRING (EC 1.2.1.5) (ALDH CLASS 3).;7.09e-112" AE004474 62% similar to calB of [Pseudomonas sp.] Putative enzymes 98389649 Class 3 PA0367_at probable transcriptional regulator PA0367 tetR Pseudomonas PA0367 PA0367 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; tetR; 9.1e-14 "tetR // Bacterial regulatory proteins, tetR family;9.1e-14" "d2tct_1 // a.4.1.9 // Tetracyclin repressor (Tet-repressor, TetR);2.15e-13" 15595564; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-121 ; 10945820; (AF193866) PhaD [Alcanivorax borkumensis];3e-43 AE004474 53% similar to hypothetical protein [Pseudomonas putida]. Transcriptional regulators Class 3 PA0368_at conserved hypothetical protein PA0368 abhydrolase Pseudomonas PA0368 "PA0368 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3.1.1.10 EC:3.1.1.10; TPES_PSEPU TROPINESTERASE (EC 3.1.1.10) (ATROPINESTERASE) (ATROPINE ACYLHYDROLASE).;5.2e-18 ; EC:1.13.12.5; LUCI_RENRE RENILLA-LUCIFERIN 2-MONOOXYGENASE (EC 1.13.12.5) (RENILLA-TYPE LUCIFERASE).;3.8e-11 ; EC:3.1.1.24; ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;6.8e-13 abhydrolase // alpha/beta hydrolase fold;1.8e-09 d1a88a_ // c.69.1.12 // Chloroperoxidase L;1.94e-17 "15803867; (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7 EDL933];5e-62 ; 15595565; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0" EC:3.8.1.5 // YM96_MYCTU PUTATIVE HALOALKANE DEHALOGENASE (EC 3.8.1.5).;1.27e-12 /// EC:1.11.1.10 // PRXC_SYNY3 PUTATIVE NON-HEME CHLOROPEROXIDASE (EC 1.11.1.10) (CHLORIDE PEROXIDASE).;4.26e-24 /// EC:3.3.2.3 // HYES_HUMAN SOLUBLE EPOXIDE HYDROLASE (SEH) (EC 3.3.2.3) (EPOXIDE HYDRATASE) (CYTOSOLIC EPOXIDE HYDROLASE) (CEH).;1.37e-13 /// EC:3.1.1.24 // ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;1.28e-15 /// EC:1.13.12.5 // LUCI_RENRE RENILLA-LUCIFERIN 2-MONOOXYGENASE (EC 1.13.12.5) (RENILLA-TYPE LUCIFERASE).;2.41e-08 AE004474 55% similar to hypothetical protein YheT [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0369_at hypothetical protein PA0369 Pseudomonas PA0369 "PA0369 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595566; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-53 AE004474 "Hypothetical, unclassified, unknown" Class 4 PA0370_at conserved hypothetical protein PA0370 Cons_hypoth95 Pseudomonas PA0370 "PA0370 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" Cons_hypoth95 // Conserved hypothetical protein 95;1.6e-85 d1dusa_ // c.66.1.4 // Hypothetical protein MJ0882;1.72e-19 15595567; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-116 ; 1072998; hypothetical protein 21.7K in ftsY 5' region - Pseudomonas aeruginosa (fragment);6e-58 AE004475 98% similar to hypothetical 21.7 kDa protein in ftsY 5' region [Pseudomonas aeruginosa]. 63% similar to YhhF hypothetical protein [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0371_at hypothetical protein PA0371 Peptidase_M16 Pseudomonas PA0371 "PA0371 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 4222 // metalloendopeptidase activity // extended:inferred from electronic annotation; Peptidase_M16; 0.011 3.4.24.64 EC:3.4.24.64; MPPB_HUMAN MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT PRECURSOR (EC 3.4.24.64) (BETA-MPP) (P-52).;9e-62 Peptidase_M16_C // Peptidase M16 inactive domain;1.6e-45 /// Peptidase_M16 // Insulinase (Peptidase family M16);0.011 d1hr6a1 // d.185.1.1 // Mitochondrial processing peptidase (MPP) alpha chain;1.13e-34 13476822; (NC_002678) protease [Mesorhizobium loti];8e-53 ; 15595568; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 EC:3.4.24.64 // MPPB_HUMAN MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT PRECURSOR (EC 3.4.24.64) (BETA-MPP) (P-52).;1.39e-88 AE004475 50% similar to HYPOTHETICAL ZINC PROTEASE-LIKE PROTEIN Y4WB [Rhizobium sp. NGR234] "Hypothetical, unclassified, unknown" 97305956 Class 4 PA0372_at probable zinc protease PA0372 Peptidase_M16 Pseudomonas PA0372 PA0372 /DEF=probable zinc protease /FUNCTION=Putative enzymes 4222 // metalloendopeptidase activity // extended:inferred from electronic annotation; Peptidase_M16; 2.4e-13 3.4.24.64 EC:3.4.24.64; MPPB_HUMAN MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT PRECURSOR (EC 3.4.24.64) (BETA-MPP) (P-52).;1.2e-89 Peptidase_M16 // Insulinase (Peptidase family M16);2.4e-13 /// Peptidase_M16_C // Peptidase M16 inactive domain;1.3e-41 d1bcca1 // d.185.1.1 // Cytochrome bc1 core subunit 1;4.26e-68 15595569; (NC_002516) probable zinc protease [Pseudomonas aeruginosa];0.0 ; 16520001; (NC_000914) Y4wA [Rhizobium sp. NGR234];3e-65 EC:3.4.24.64 // MPPB_HUMAN MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT PRECURSOR (EC 3.4.24.64) (BETA-MPP) (P-52).;2.25e-117 AE004475 53% similar to HYPOTHETICAL ZINC PROTEASE Y4WA [Rhizobium sp. NGR234] Putative enzymes 97305956 Class 3 PA0373_ftsY_at signal recognition particle receptor FtsY PA0373 SRP54_N Pseudomonas PA0373 PA0373 /GENE=ftsY /DEF=signal recognition particle receptor FtsY /FUNCTION=Protein secretion/export apparatus 5525 // GTP binding // extended:inferred from electronic annotation; SRP54_N; 3.2e-15 "SRP54_N // SRP54-type protein, helical bundle domain;3.2e-15 /// SRP54 // SRP54-type protein, GTPase domain;1.4e-120" "d1fts_1 // a.24.13.1 // Signal recognition particle receptor, FtsY;7.16e-23 /// d1fts_2 // c.37.1.10 // GTPase domain of the signal recognition particle receptor FtsY;1.24e-74" 16131336; (NC_000913) cell division membrane protein [Escherichia coli K12];e-120 ; 15595570; (NC_002516) signal recognition particle receptor FtsY [Pseudomonas aeruginosa];0.0 AE004475 67% similar to Escherichia coli ftsY gene product. Protein secretion/export apparatus 97156021; 94252315 Class 2 PA0374_ftsE_at cell division protein FtsE PA0374 ABC_tran Pseudomonas PA0374 PA0374 /GENE=ftsE /DEF=cell division protein FtsE /FUNCTION=Cell division; Transport of small molecules 4009 // ATP-binding cassette (ABC) transporter activity // extended:inferred from electronic annotation; ABC_tran; 1.7e-60 ABC_tran // ABC transporter;1.7e-60 d1l2ta_ // c.37.1.12 // MJ0796;1.21e-61 13377876; (AF334761) cell division ATP-binding protein [Aeromonas hydrophila];2e-67 ; 15595571; (NC_002516) cell division protein FtsE [Pseudomonas aeruginosa];e-122 AE004475 73% similar to Escherichia coli cell division protein ftsE. Cell division; Transport of small molecules 94316500 Class 2 PA0375_ftsX_at cell division protein FtsX PA0375 DUF214 Pseudomonas PA0375 PA0375 /GENE=ftsX /DEF=cell division protein FtsX /FUNCTION=Cell division 16020 // membrane // extended:Unknown; FtsX; 2.6e-12 FtsX // Predicted permease;2.6e-12 15595572; (NC_002516) cell division protein FtsX [Pseudomonas aeruginosa];0.0 ; 11277898; cell division protein FtsX homolog - Pseudomonas putida;e-127 numtm:3;Nin-prob:0.82238;Type: ;Span:TM from 207 to 229: Eval:0.39476/TM from 255 to 277: Eval:0.58841/TM from 306 to 325: Eval:0.93134 AE004475 53% similar to Escherichia coli cell division protein ftsX Cell division 94316500; 87089083 Class 2 PA0376_rpoH_at sigma factor RpoH PA0376 Pseudomonas PA0376 PA0376 /GENE=rpoH /DEF=sigma factor RpoH /FUNCTION=Transcriptional regulators "sigma70_r2 // Sigma-70 region 2;1.9e-21 /// sigma70_r4 // Sigma-70, region 4;1.6e-14" d1ku3a_ // a.112.1.1 // Sigma factor SigA fragments;4.03e-11 493078; (U09560) RpoH (sigma 32) [Pseudomonas aeruginosa];e-160 ; 15595573; (NC_002516) sigma factor RpoH [Pseudomonas aeruginosa];e-161 AE004475 100% similar to heat-shock sigma factor [Pseudomonas aeruginosa] Transcriptional regulators Class 1 PA0377_at hypothetical protein PA0377 Pseudomonas PA0377 "PA0377 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595574; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-114 numtm:1;Nin-prob:0.99712;Type:SIGNAL;Span:TM from 7 to 25: Eval:0.75984 AE004475 "Hypothetical, unclassified, unknown" Class 4 PA0378_at probable transglycosylase PA0378 Transglycosyl Pseudomonas PA0378 PA0378 /DEF=probable transglycosylase /FUNCTION=Cell wall / LPS / capsule 3824 // catalytic activity // extended:Unknown; Transglycosyl; 4.9e-58 Transglycosyl // Transglycosylase;4.9e-58 15838316; (NC_002488) monofunctional biosynthetic peptidoglycan transglycosylase [Xylella fastidiosa 9a5c];5e-60 ; 15595575; (NC_002516) probable transglycosylase [Pseudomonas aeruginosa];e-142 numtm:1;Nin-prob:0.99183;Type:SIGNAL;Span:TM from 20 to 42: Eval:0.78772 AE004475 68% similar to MONOFUNCTIONAL BIOSYNTHETIC PEPTIDOGLYCAN TRANSGLYCOSYLASE putative peptidoglycan enzyme [Escherichia coli] Peptideglycan biosynthesis Cell wall / LPS / capsule Class 3 PA0379_at conserved hypothetical protein PA0379 DUF423 Pseudomonas PA0379 "PA0379 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF423 // Protein of unknown function (DUF423);2.7e-59 15616390; (NC_002570) BH3828~unknown conserved protein [Bacillus halodurans];2e-25 ; 15595576; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];2e-65 numtm:4;Nin-prob:0.99126;Type: ;Span:TM from 5 to 27: Eval:0.85500/TM from 42 to 60: Eval:0.59393/TM from 67 to 89: Eval:0.73430/TM from 99 to 121: Eval:0.35073 AE004475 56% similar to HYPOTHETICAL PROTEIN YgdD (HI1073) [Haemophilus influenzae Rd] "Hypothetical, unclassified, unknown" Class 4 PA0380_i_at conserved hypothetical protein PA0380 DUF170 Pseudomonas PA0380 "PA0380 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 6790 // sulfur metabolism // extended:inferred from electronic annotation; ThiS; 5e-23 ThiS // ThiS family;5e-23 d1f0za_ // d.15.3.2 // Thiamin biosynthesis sulfur carrier protein ThiS;1.9e-18 15837384; (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c];7e-14 ; 15595577; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];7e-31 AE004475 60% similar to hypothetical protein [Porphyra purpurea]. "Hypothetical, unclassified, unknown" Class 4 PA0381_thiG_at "thiamine biosynthesis protein, thiazole moiety" PA0381 Hydrolase Pseudomonas PA0381 "PA0381 /GENE=thiG /DEF=thiamine biosynthesis protein, thiazole moiety /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 9228 // thiamin biosynthesis // extended:inferred from sequence similarity; ThiG; 6.6e-181 ThiG // Thiazole biosynthesis protein ThiG;6.6e-181 d1h5ya_ // c.1.2.1 // Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF;7.45e-10 "15837385; (NC_002488) thiamine biosynthesis protein [Xylella fastidiosa 9a5c];e-106 ; 15595578; (NC_002516) thiamine biosynthesis protein, thiazole moiety [Pseudomonas aeruginosa];e-147" "EC:1.1.3.15 // GOX_SPIOL (S)-2-HYDROXY-ACID OXIDASE, PEROXISOMAL (EC 1.1.3.15) (GLYCOLATE OXIDASE) (GOX) (SHORT CHAIN ALPHA-HYDROXY ACID OXIDASE).;1.38e-11 /// EC:1.1.1.205 // IMD2_HUMAN INOSINE-5-MONOPHOSPHATE DEHYDROGENASE 2 (EC 1.1.1.205) (IMP DEHYDROGENASE 2) (IMPDH-II) (IMPD 2).;3.56e-18" AE004475 "64% similar to thiamin biosynthesis, thiazole moiety ThiG [Escherichia coli]" Thiamine metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" 98037482 Class 2 PA0382_micA_at DNA mismatch repair protein MicA PA0382 Methyltransf_4 Pseudomonas PA0382 "PA0382 /GENE=micA /DEF=DNA mismatch repair protein MicA /FUNCTION=DNA replication, recombination, modification and repair" Methyltransf_4 // Putative methyltransferase;6.6e-74 15595579; (NC_002516) DNA mismatch repair protein MicA [Pseudomonas aeruginosa];e-131 ; 14194936; Hypothetical methyltransferase PA0382;e-131 AE004476 74% similar to [micA] gene products [Escherichia coli] "DNA replication, recombination, modification and repair" 91161503 Class 2 PA0383_at conserved hypothetical protein PA0383 Pseudomonas PA0383 "PA0383 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595580; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15598277; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-121 AE004476 63% similar to (U10470) unknown [Pseudomonas fluorescens] "Hypothetical, unclassified, unknown" Class 4 PA0384_at hypothetical protein PA0384 Pseudomonas PA0384 "PA0384 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595581; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];4e-43 AE004476 "Hypothetical, unclassified, unknown" Class 4 PA0385_at hypothetical protein PA0385 Pseudomonas PA0385 "PA0385 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595582; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-55 ; 15641200; (NC_002505) hypothetical protein [Vibrio cholerae];8e-11 numtm:3;Nin-prob:0.05187;Type: ;Span:TM from 20 to 42: Eval:0.92728/TM from 55 to 77: Eval:0.70565/TM from 87 to 104: Eval:0.63893 AE004476 "Hypothetical, unclassified, unknown" Class 4 PA0386_at probable oxidase PA0386 Radical_SAM Pseudomonas PA0386 PA0386 /DEF=probable oxidase /FUNCTION=Putative enzymes Radical_SAM // Radical SAM superfamily;1.9e-29 "15640482; (NC_002505) oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio cholerae];e-120 ; 15595583; (NC_002516) probable oxidase [Pseudomonas aeruginosa];0.0" EC:2.8.1.6 // BIOB_YEAST BIOTIN SYNTHASE (EC 2.8.1.6) (BIOTIN SYNTHETASE).;6.38e-12 AE004476 69% similar to putative oxidase YggW [Escherichia coli]; 44% similar to oxygen independent coprophorphyrinogen III oxidase HemN [Escherichia coli] Putative enzymes Class 3 PA0387_at conserved hypothetical protein PA0387 Ham1p_like Pseudomonas PA0387 "PA0387 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" Ham1p_like // Ham1 family;4.7e-83 d1k7ka_ // c.51.4.1 // Hypothetical protein YggV;1.03e-67 15640483; (NC_002505) HAM1 protein [Vibrio cholerae];2e-54 ; 15595584; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-108 AE004476 70% similar to putative ribosomal protein YggV [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0388_at hypothetical protein PA0388 Pseudomonas PA0388 "PA0388 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15640484; (NC_002505) hypothetical protein [Vibrio cholerae];1e-20 ; 15595585; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-73 AE004476 "Hypothetical, unclassified, unknown" Class 4 PA0389_at hypothetical protein PA0389 Pseudomonas PA0389 "PA0389 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 2.1.1.17 EC:2.1.1.17; PMTA_RHOSH PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE (EC 2.1.1.17).;1.1e-17 d1kpga_ // c.66.1.18 // CmaA1;5.03e-23 13540422; (AF363274) MetW [Pseudomonas putida];2e-98 ; 15595586; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-123 EC:2.1.1.51 // RRMA_ECOLI RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE A (EC 2.1.1.51) (RRNA (GUANINE-N1-)-METHYLTRANSFERASE) (23S RRNA M1G745 METHYLTRANSFERASE).;6.83e-24 AE004476 "Hypothetical, unclassified, unknown" Class 4 PA0390_metX_at 2.3.1.31 homoserine O-acetyltransferase PA0390 abhydrolase Pseudomonas PA0390 PA0390 /GENE=metX /DEF=homoserine O-acetyltransferase /FUNCTION=Amino acid biosynthesis and metabolism 3.1.1.24 EC:3.1.1.24; ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;3.8e-13 ; EC:2.3.1.31; MET2_YEAST HOMOSERINE O-ACETYLTRANSFERASE (EC 2.3.1.31) (HOMOSERINE O-TRANS- ACETYLASE).;7.6e-63 abhydrolase // alpha/beta hydrolase fold;2.8e-11 "d1c4xa_ // c.69.1.10 // 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD);1.37e-18" 15595587; (NC_002516) homoserine O-acetyltransferase [Pseudomonas aeruginosa];0.0 ; 15676833; (NC_003112) homoserine O-acetyltransferase [Neisseria meningitidis MC58];e-146 EC:2.3.1.31 // MET2_YEAST HOMOSERINE O-ACETYLTRANSFERASE (EC 2.3.1.31) (HOMOSERINE O-TRANS- ACETYLASE).;1.14e-130 /// EC:3.1.1.24 // ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;1.71e-15 /// EC:3.8.1.5 // YM96_MYCTU PUTATIVE HALOALKANE DEHALOGENASE (EC 3.8.1.5).;9.94e-09 /// EC:3.3.2.3 // HYES_HUMAN SOLUBLE EPOXIDE HYDROLASE (SEH) (EC 3.3.2.3) (EPOXIDE HYDRATASE) (CYTOSOLIC EPOXIDE HYDROLASE) (CEH).;2.33e-17 AE004476 67% similar to homoserine O-acetyltransferase MetX [Leptospira meyeri]; 54% similar to homoserine O-acetyltransferase Met2 [Saccharomyces cerevisiae] Methionine metabolism; Sulfur metabolism Amino acid biosynthesis and metabolism Class 2 PA0391_at hypothetical protein PA0391 Pseudomonas PA0391 "PA0391 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "15218732; (NM_100198) fructokinase, putative [Arabidopsis thaliana];4e-06 ; 15595588; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0" AE004476 "Hypothetical, unclassified, unknown" Class 4 PA0392_at conserved hypothetical protein PA0392 YGGT Pseudomonas PA0392 "PA0392 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16020 // membrane // extended:Unknown; YGGT; 3.8e-23 YGGT // YGGT family;1.2e-44 77666; hypothetical protein (proC 3' region) - Pseudomonas aeruginosa (strain PAO) (fragment);1e-35 ; 15595589; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-105 numtm:4;Nin-prob:0.96432;Type: ;Span:TM from 7 to 29: Eval:0.93880/TM from 70 to 92: Eval:0.89126/TM from 99 to 121: Eval:0.98757/TM from 163 to 185: Eval:0.60551 AE004476 65% similar to HYPOTHETICAL PROTEIN IN PROC 3'REGION [Vibrio alginolyticus] "Hypothetical, unclassified, unknown" Class 4 PA0393_proC_at 1.5.1.2 pyrroline-5-carboxylate reductase PA0393 P5CR Pseudomonas PA0393 PA0393 /GENE=proC /DEF=pyrroline-5-carboxylate reductase /FUNCTION=Amino acid biosynthesis and metabolism 4735 // pyrroline 5-carboxylate reductase activity // extended:inferred from electronic annotation; P5CR; 2.8e-128 1.5.1.2 EC:1.5.1.2; PROC_HUMAN PYRROLINE-5-CARBOXYLATE REDUCTASE (EC 1.5.1.2) (P5CR) (P5C REDUCTASE).;1.6e-82 ; EC:1.3.1.12; TYRC_ZYMMO TYRC PROTEIN [INCLUDES: CYCLOHEXADIENYL DEHYDROGENASE (AROGENATE DEHYDROGENASE) (EC 1.3.1.43) (ADH); PREPHENATE DEHYDROGENASE (EC 1.3.1.12) (PDH)].;2.1e-50 P5CR // Delta 1-pyrroline-5-carboxylate reductase;2.8e-128 d1i36a2 // c.2.1.6 // Conserved hypothetical protein MTH1747;2.74e-28 15595590; (NC_002516) pyrroline-5-carboxylate reductase [Pseudomonas aeruginosa];e-148 ; 14034124; (AJ313094) putative pyrroline-5-carboxylate reductase [Aspergillus nidulans];4e-61 EC:1.5.1.2 // PROC_HUMAN PYRROLINE-5-CARBOXYLATE REDUCTASE (EC 1.5.1.2) (P5CR) (P5C REDUCTASE).;9.5e-91 /// EC:1.3.1.12 // TYRC_ZYMMO TYRC PROTEIN [INCLUDES: CYCLOHEXADIENYL DEHYDROGENASE (AROGENATE DEHYDROGENASE) (EC 1.3.1.43) (ADH) PREPHENATE DEHYDROGENASE (EC 1.3.1.12) (PDH)].;9.99e-10 AE004476 100% identical to delta-1-pyrroline-5-carboxylate reductase [Pseudomonas aeruginosa] Arginine and proline metabolism; Urea cycle and metabolism of amino groups Amino acid biosynthesis and metabolism 91285432 Class 1 PA0394_at conserved hypothetical protein PA0394 UPF0001 Pseudomonas PA0394 "PA0394 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "Ala_racemase_N // Alanine racemase, N-terminal domain;6.5e-52" d1ct5a_ // c.1.6.2 // Hypothetical protein ybl036c;8.39e-78 15595591; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-127 ; 15640488; (NC_002505) conserved hypothetical protein [Vibrio cholerae];8e-65 AE004476 100% identical to HYPOTHETICAL 24.5 KD PROTEIN IN PILT 5'REGION (ORF5) [Pseudomonas aeruginosa] and 68% similar to hypothetical protein YggS [Escherichia coli] "Hypothetical, unclassified, unknown" 91285432 Class 4 PA0395_pilT_at twitching motility protein PilT PA0395 GSPII_E Pseudomonas PA0395 PA0395 /GENE=pilT /DEF=twitching motility protein PilT /FUNCTION=Motility & Attachment; Cell wall / LPS / capsule 5524 // ATP binding // extended:inferred from electronic annotation; GSPII_E; 5.6e-25 GSPII_E // Type II/IV secretion system protein;5.6e-25 "d1g6oa_ // c.37.1.13 // Hexameric traffic ATPase, HP0525;7e-78" 15595592; (NC_002516) twitching motility protein PilT [Pseudomonas aeruginosa];0.0 ; 5918203; (AJ249385) twitching motility protein [Pseudomonas stutzeri];0.0 AE004477 100% identical to twitching motility protein [Pseudomonas aeruginosa] Pilin biosynthesis Motility & Attachment; Cell wall / LPS / capsule 91285432; 99307227; 93225810 Class 1 PA0396_pilU_at twitching motility protein PilU PA0396 GSPII_E Pseudomonas PA0396 PA0396 /GENE=pilU /DEF=twitching motility protein PilU /FUNCTION=Motility & Attachment 5524 // ATP binding // extended:inferred from electronic annotation; GSPII_E; 5.6e-12 GSPII_E // Type II/IV secretion system protein;5.6e-12 "d1g6oa_ // c.37.1.13 // Hexameric traffic ATPase, HP0525;6.41e-73" 5918204; (AJ249385) putative secretion protein [Pseudomonas stutzeri];0.0 ; 15595593; (NC_002516) twitching motility protein PilU [Pseudomonas aeruginosa];0.0 AE004477 100% identical to pilU [Pseudomonas aeruginosa]; 62% similar to twitching motility protein PilT [Pseudomonas aeruginosa] Pilin biosynthesis Motility & attachment 99307227 Class 1 PA0397_at probable cation efflux system protein PA0397 Cation_efflux Pseudomonas PA0397 PA0397 /DEF=probable cation efflux system protein /FUNCTION=Transport of small molecules 8324 // cation transporter activity // extended:inferred from electronic annotation; Cation_efflux; 9.5e-110 Cation_efflux // Cation efflux family;9.5e-110 2507005; COBALT-ZINC-CADMIUM RESISTANCE PROTEIN CZCD (CATION EFFLUX SYSTEM PROTEIN CZCD);e-106 ; 15595594; (NC_002516) probable cation efflux system protein [Pseudomonas aeruginosa];e-167 numtm:4;Nin-prob:0.92134;Type: ;Span:TM from 21 to 43: Eval:0.57578/TM from 84 to 106: Eval:0.60369/TM from 155 to 177: Eval:0.85406/TM from 182 to 199: Eval:0.47021 AE004477 77% similar to CATION EFFLUX SYSTEM PROTEIN CZCD [Ralstonia eutropha] Transport of small molecules 90017477 Class 3 PA0398_at hypothetical protein PA0398 Pseudomonas PA0398 "PA0398 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" TM2 // TM2 domain;5e-38 12007323; (AF310895) unknown [Dictyostelium discoideum];2e-10 ; 15595595; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-78 numtm:4;Nin-prob:0.88845;Type: ;Span:TM from 12 to 29: Eval:0.86447/TM from 34 to 56: Eval:0.75808/TM from 76 to 93: Eval:0.70695/TM from 97 to 119: Eval:0.73652 AE004477 "Hypothetical, unclassified, unknown" Class 4 PA0399_at 4.2.1.22 cystathionine beta-synthase PA0399 CBS Pseudomonas PA0399 PA0399 /DEF=cystathionine beta-synthase /FUNCTION=Amino acid biosynthesis and metabolism 16829 // lyase activity // extended:Unknown; PALP; 9.8e-94 4.1.99.4 EC:4.1.99.4; 1A1D_THEMA PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (EC 4.1.99.4) (ACC DEAMINASE).;2.2e-66 ; EC:4.2.1.22; CBS_HUMAN CYSTATHIONINE BETA-SYNTHASE (EC 4.2.1.22) (SERINE SULFHYDRASE) (BETA-THIONASE).;1.5e-110 ; EC:4.2.99.8; Y4XP_RHISN PUTATIVE CYSTEINE SYNTHASE (EC 4.2.99.8) (O-ACETYLSERINE SULFHYDRYLASE) (O-ACETYLSERINE (THIOL)-LYASE) (CSASE).;1.1e-92 PALP // Pyridoxal-phosphate dependent enzyme;9.8e-94 /// CBS // CBS domain;1.4e-16 d1j6na_ // c.79.1.1 // O-acetylserine sulfhydrylase (Cysteine synthase);1.59e-88 14090409; (AF204145) cystathionine beta-lyase [Xanthomonas campestris pv. campestris];e-163 ; 15595596; (NC_002516) cystathionine beta-synthase [Pseudomonas aeruginosa];0.0 EC:4.2.99.8 // Y4XP_RHISN PUTATIVE CYSTEINE SYNTHASE (EC 4.2.99.8) (O-ACETYLSERINE SULFHYDRYLASE) (O-ACETYLSERINE (THIOL)-LYASE) (CSASE).;2.15e-99 /// EC:4.2.1.22 // CBS_HUMAN CYSTATHIONINE BETA-SYNTHASE (EC 4.2.1.22) (SERINE SULFHYDRASE) (BETA-THIONASE).;8.12e-128 /// EC:1.1.1.205 // IMD2_HUMAN INOSINE-5-MONOPHOSPHATE DEHYDROGENASE 2 (EC 1.1.1.205) (IMP DEHYDROGENASE 2) (IMPDH-II) (IMPD 2).;5.99e-11 /// EC:4.1.99.4 // 1A1D_THEMA PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (EC 4.1.99.4) (ACC DEAMINASE).;5.21e-66 AE004477 53% similar to cysM2 putative cystathionine beta-synthase [Mycobacterium tuberculosis]; 53% similar to cystathionine beta-synthase [Homo sapiens] "Cysteine metabolism; Glycine, serine and threonine metabolism" Amino acid biosynthesis and metabolism 96181548 Class 2 PA0400_at probable cystathionine gamma-lyase PA0400 Cys_Met_Meta_PP Pseudomonas PA0400 PA0400 /DEF=probable cystathionine gamma-lyase /FUNCTION=Amino acid biosynthesis and metabolism 6520 // amino acid metabolism // extended:inferred from electronic annotation; Cys_Met_Meta_PP; 8.1e-240 4123 // cystathionine-gamma-lyase activity // extended:Unknown; 4.4.1.1; 1.1e-134 2.6.1.51 EC:2.6.1.51; SPYA_HUMAN SERINE--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.51) (SPT) (ALANINE-- GLYOXYLATE AMINOTRANSFERASE) (EC 2.6.1.44) (AGT).;2.8e-16 ; EC:4.2.99.10; MT17_YEAST MET17 PROTEIN [INCLUDES: O-ACETYLHOMOSERINE SULFHYDRYLASE (EC 4.2.99.10) (OAH SULFHYDRYLASE); O-ACETYLSERINE SULFHYDRYLASE (EC 4.2.99.8) (OAS SULFHYDRYLASE)].;4.4e-119 ; EC:4.4.1.1; CGL_HUMAN CYSTATHIONINE GAMMA-LYASE (EC 4.4.1.1) (GAMMA-CYSTATHIONASE).;1.2e-134 ; EC:2.9.1.1; SELA_HAEIN L-SERYL-TRNA(SEC) SELENIUM TRANSFERASE (EC 2.9.1.1) (CYSTEINYL- TRNA(SEC) SELENIUM TRANSFERASE) (SELENOCYSTEINE SYNTHASE) (SELENOCYSTEINYL-TRNA(SEC) SYNTHASE).;1.9e-81 Cys_Met_Meta_PP // Cys/Met metabolism PLP-dependent enzyme;8.1e-240 "d1gc0a_ // c.67.1.3 // Methionine gamma-lyase, MGL;1.67e-116" 13473790; (NC_002678) cystathionine gamma-lyase [Mesorhizobium loti];e-153 ; 15595597; (NC_002516) probable cystathionine gamma-lyase [Pseudomonas aeruginosa];0.0 EC:2.6.1.66 // AVTA_ECOLI VALINE--PYRUVATE AMINOTRANSFERASE (EC 2.6.1.66) (TRANSAMINASE C) (ALANINE--VALINE TRANSAMINASE).;5.83e-45 /// EC:4.4.1.1 // CGL_HUMAN CYSTATHIONINE GAMMA-LYASE (EC 4.4.1.1) (GAMMA-CYSTATHIONASE).;1.1e-134 /// EC:4.2.99.10 // MT17_YEAST MET17 PROTEIN [INCLUDES: O-ACETYLHOMOSERINE SULFHYDRYLASE (EC 4.2.99.10) (OAH SULFHYDRYLASE) O-ACETYLSERINE SULFHYDRYLASE (EC 4.2.99.8) (OAS SULFHYDRYLASE)].;5.09e-134 AE004477 81% similar to cystathionine gamma-lyase-like protein [Stenotrophomonas maltophilia] "Cysteine metabolism; Glycine, serine and threonine metabolism; Methionine metabolism; Nitrogen metabolism; Selenoamino acid metabolism; Sulfur metabolism" Amino acid biosynthesis and metabolism Class 3 PA0401_at noncatalytic dihydroorotase-like protein PA0401 Dihydroorotase Pseudomonas PA0401 PA0401 /DEF=noncatalytic dihydroorotase-like protein /FUNCTION=Nucleotide biosynthesis and metabolism 16787 // hydrolase activity // extended:Unknown; Amidohydro_1; 7.7e-06 3.5.1.82 EC:3.5.1.82; NDED_ALCXX N-ACYL-D-GLUTAMATE DEACYLASE (EC 3.5.1.82) (N-ACYL-D-GLUTAMATE AMIDOHYDROLASE).;1e-82 ; EC:3.5.2.7; HUTI_YERPE IMIDAZOLONEPROPIONASE (EC 3.5.2.7) (IMIDAZOLONE-5-PROPIONATE HYDROLASE).;5.5e-11 Amidohydro_1 // Amidohydrolase family;7.7e-06 d1gkra2 // c.1.9.6 // L-hydantoinase;1.05e-85 /// d1gkra1 // b.92.1.3 // L-hydantoinase;5.25e-23 309886; (L19649) dihydroorotase-like [Pseudomonas aeruginosa];0.0 ; 15595598; (NC_002516) noncatalytic dihydroorotase-like protein [Pseudomonas aeruginosa];0.0 EC:3.5.2.7 // HUTI_YERPE IMIDAZOLONEPROPIONASE (EC 3.5.2.7) (IMIDAZOLONE-5-PROPIONATE HYDROLASE).;7.6e-22 /// EC:3.5.1.82 // NDED_ALCXX N-ACYL-D-GLUTAMATE DEACYLASE (EC 3.5.1.82) (N-ACYL-D-GLUTAMATE AMIDOHYDROLASE).;2.03e-81 /// EC:3.5.4.2 // ADEC_METTH PROBABLE ADENINE DEAMINASE (EC 3.5.4.2) (ADENASE) (ADENINE AMINASE).;5.3e-39 AE004477 100% identical to dihydroorotase-like protein [Pseudomonas aeruginosa] and 86% similar to aspartate carbamoyltransferase 44k noncatalytic chain dihydro-orotase [Pseudomonas putida]. Nucleotide biosynthesis and metabolism Class 2 PA0402_pyrB_at 2.1.3.2 aspartate carbamoyltransferase PA0402 OTCace_N Pseudomonas PA0402 PA0402 /GENE=pyrB /DEF=aspartate carbamoyltransferase /FUNCTION=Amino acid biosynthesis and metabolism; Nucleotide biosynthesis and metabolism 16743 // carboxyl- and carbamoyltransferase activity // extended:Unknown; OTCace_N; 1.4e-39 2.1.3.3 EC:2.1.3.3; OTC_HUMAN ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCASE) (ORNITHINE TRANSCARBAMYLASE).;3.2e-90 "OTCace_N // Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;1.4e-39 /// OTCace // Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain;2.3e-24" d1ekxa1 // c.78.1.1 // Aspartate carbamoyltransferase catalytic subunit;3.22e-42 15595599; (NC_002516) aspartate carbamoyltransferase [Pseudomonas aeruginosa];0.0 ; 309885; (L19649) 'aspartate transcarbamoylase' [Pseudomonas aeruginosa];0.0 EC:2.1.3.3 // OTC_HUMAN ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCASE) (ORNITHINE TRANSCARBAMYLASE).;1.01e-97 AE004477 94% similar to P. putida aspartate carbamoyltransferase. Alanine and Aspartate metabolism; Pyrimidine metabolism Amino acid biosynthesis and metabolism; Nucleotide biosynthesis and metabolism Class 2 PA0403_pyrR_at 2.4.2.9 transcriptional regulator PyrR PA0403 Pribosyltran Pseudomonas PA0403 PA0403 /GENE=pyrR /DEF=transcriptional regulator PyrR /FUNCTION=Nucleotide biosynthesis and metabolism; Transcriptional regulators 9116 // nucleoside metabolism // extended:inferred from direct assay; Pribosyltran; 8e-07 2.4.2.8 EC:2.4.2.8; HPRT_HUMAN HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.8) (HGPRT) (HGPRTASE).;3.3e-24 ; EC:2.4.2.22; XGPT_SALTY XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.22) (XGPRT).;3e-13 Pribosyltran // Phosphoribosyl transferase domain;8e-07 d1a3c__ // c.61.1.1 // Uracil PRTase;8.42e-37 15595600; (NC_002516) transcriptional regulator PyrR [Pseudomonas aeruginosa];5e-93 ; 4079715; (AF031895) uracil phosphoribosyltransferase [Pseudomonas putida];7e-72 EC:2.4.2.22 // XGPT_SALTY XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.22) (XGPRT).;3.35e-13 /// EC:4.1.1.23 // PYR5_HUMAN URIDINE 5-MONOPHOSPHATE SYNTHASE (UMP SYNTHASE) [INCLUDES: OROTATE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.10) (OPRTASE) OROTIDINE 5- PHOSPHATE DECARBOXYLASE (EC 4.1.1.23) (OMPDECASE)].;9.08e-08 AE004477 61% similar to uracil phosphoribosyltransferase PyrR [Bacillus subtilis]. Nucleotide biosynthesis and metabolism; Transcriptional regulators Class 2 PA0404_i_at conserved hypothetical protein PA0404 UPF0081 Pseudomonas PA0404 "PA0404 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" UPF0081 // Uncharacterised protein family (UPF0081);9.8e-48 15595601; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];8e-80 ; 10442817; (AY007523) hypothetical protein [Pseudomonas fluorescens];3e-59 AE004477 67% similar to HYPOTHETICAL PROTEIN YqgF [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0405_at conserved hypothetical protein PA0405 DUF179 Pseudomonas PA0405 "PA0405 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "DUF179 // Uncharacterized ACR, COG1678;1.3e-101" 10442816; (AY007523) AlgH [Pseudomonas fluorescens];2e-79 ; 15595602; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-106 AE004477 60% similar to HYPOTHETICAL PROTEIN YqgE [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0406_at hypothetical protein PA0406 Pseudomonas PA0406 "PA0406 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1lr0a_ // d.212.1.1 // TolA;8.06e-08 15838551; (NC_002488) TonB protein [Xylella fastidiosa 9a5c];7e-42 ; 15595603; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-180 numtm:1;Nin-prob:0.94569;Type: ;Span:TM from 43 to 65: Eval:0.75698 AE004477 "Hypothetical, unclassified, unknown" Class 4 PA0407_gshB_at 6.3.2.3 glutathione synthetase PA0407 GSH-S_N Pseudomonas PA0407 "PA0407 /GENE=gshB /DEF=glutathione synthetase /FUNCTION=Amino acid biosynthesis and metabolism; Biosynthesis of cofactors, prosthetic groups and carriers" 4363 // glutathione synthase activity // extended:Unknown; GSH-S_N; 4.4e-48 "GSH-S_N // Prokaryotic glutathione synthetase, N-terminal domain;4.4e-48 /// GSH-S_ATP // Prokaryotic glutathione synthetase, ATP-binding domain;1e-54" "d1gsa_1 // c.30.1.3 // Prokaryotic glutathione synthetase, N-terminal domain;4.09e-41 /// d1gsa_2 // d.142.1.1 // Glutathione synthetase;6.89e-68" 15595604; (NC_002516) glutathione synthetase [Pseudomonas aeruginosa];0.0 ; 15803486; (NC_002655) glutathione synthetase [Escherichia coli O157:H7 EDL933];e-114 AE004478 75% similar to glutathione synthetase (GSH-II) [Escherichia coli] Glutamate metabolism; Glutathione metabolism "Amino acid biosynthesis and metabolism; Biosynthesis of cofactors, prosthetic groups and carriers" 88298832 Class 2 PA0408_pilG_at twitching motility protein PilG PA0408 response_reg Pseudomonas PA0408 PA0408 /GENE=pilG /DEF=twitching motility protein PilG /FUNCTION=Chemotaxis; Two-component regulatory systems; Motility & Attachment 156 // two-component response regulator activity // extended:inferred from electronic annotation; response_reg; 4.2e-33 response_reg // Response regulator receiver domain;4.2e-33 d1b00a_ // c.23.1.1 // PhoB receiver domain;4.98e-32 15838549; (NC_002488) pilus protein [Xylella fastidiosa 9a5c];2e-51 ; 15595605; (NC_002516) twitching motility protein PilG [Pseudomonas aeruginosa];1e-71 AE004478 62% similar to regulatory components of sensory transduction system [Synechocystis sp.] Pilin biosynthesis; Two-component System; Chemotaxis Chemotaxis; Two-component regulatory systems; Motility & Attachment 97113801; 97368113 Class 1 PA0409_pilH_at twitching motility protein PilH PA0409 response_reg Pseudomonas PA0409 PA0409 /GENE=pilH /DEF=twitching motility protein PilH /FUNCTION=Chemotaxis; Two-component regulatory systems; Motility & Attachment 156 // two-component response regulator activity // extended:inferred from electronic annotation; response_reg; 2e-36 response_reg // Response regulator receiver domain;2e-36 d1b00a_ // c.23.1.1 // PhoB receiver domain;3.43e-35 "15595606; (NC_002516) twitching motility protein PilH [Pseudomonas aeruginosa];1e-63 ; 15837052; (NC_002488) two-component system, regulatory protein [Xylella fastidiosa 9a5c];1e-31" EC:3.1.1.61 // Y415_BORBU PROBABLE PROTEIN-GLUTAMATE METHYLESTERASE BB0415 (EC 3.1.1.61).;1.35e-34 AE004478 63% similar to regulatory components of sensory transduction system and chemotaxis protein CheY [Synechocystis sp.] Pilin biosynthesis; Two-component System; Chemotaxis Chemotaxis; Two-component regulatory systems; Motility & Attachment 97368113; 97113801 Class 1 PA0410_pilI_at twitching motility protein PilI PA0410 CheW Pseudomonas PA0410 PA0410 /GENE=pilI /DEF=twitching motility protein PilI /FUNCTION=Motility & Attachment; Chemotaxis 4871 // signal transducer activity // extended:inferred from electronic annotation; CheW; 2.2e-34 CheW // CheW-like domain;2.2e-34 d1k0sa_ // b.40.7.1 // Chemotaxis protein CheW;1.83e-30 15838548; (NC_002488) pilus biogenesis protein [Xylella fastidiosa 9a5c];1e-19 ; 15595607; (NC_002516) twitching motility protein PilI [Pseudomonas aeruginosa];e-101 AE004478 48% similar to purine-binding chemotaxis protein (cheW)[Helicobacter pylori] and FrzA protein [Myxococcus xanthus] Chemotaxis; Pilin biosynthesis Motility & Attachment; Chemotaxis 97368113; 97113801 Class 1 PA0411_pilJ_at twitching motility protein PilJ PA0411 MCPsignal Pseudomonas PA0411 PA0411 /GENE=pilJ /DEF=twitching motility protein PilJ /FUNCTION=Motility & Attachment; Chemotaxis 4871 // signal transducer activity // extended:inferred from electronic annotation; MCPsignal; 4e-59 MCPsignal // Methyl-accepting chemotaxis protein (MCP) signaling domain;4e-59 15838547; (NC_002488) pilus biogenesis protein [Xylella fastidiosa 9a5c];e-147 ; 15595608; (NC_002516) twitching motility protein PilJ [Pseudomonas aeruginosa];0.0 numtm:2;Nin-prob:0.05279;Type:SIGNAL;Span:TM from 18 to 40: Eval:0.77385/TM from 310 to 332: Eval:0.64496 AE004478 59% similar to methyl-accepting chemotaxis protein I [Synechocystis sp.] Chemotaxis; Pilin biosynthesis Motility & Attachment; Chemotaxis 97368113; 97113801 Class 1 PA0412_pilK_at 2.1.1.80 methyltransferase PilK PA0412 CheR_N Pseudomonas PA0412 PA0412 /GENE=pilK /DEF=methyltransferase PilK /FUNCTION=Motility & Attachment; Chemotaxis 8757 // S-adenosylmethionine-dependent methyltransferase activity // extended:Unknown; CheR_N; 3.4e-18 2.1.1.80 EC:2.1.1.80; FRZF_MYXXA PROTEIN METHYLTRANSFERASE FRZF (EC 2.1.1.80).;5.5e-97 "CheR // CheR methyltransferase, SAM binding domain;5.9e-91 /// CheR_N // CheR methyltransferase, all-alpha domain;3.4e-18" "d1af7_2 // c.66.1.8 // Chemotaxis receptor methyltransferase CheR, C-terminal domain;2.91e-50 /// d1af7_1 // a.58.1.1 // Chemotaxis receptor methyltransferase CheR, N-terminal domain;1.84e-16" 15802296; (NC_002655) response regulator for chemotaxis; protein glutamate methyltransferase [Escherichia coli O157:H7 EDL933];8e-26 ; 15595609; (NC_002516) methyltransferase PilK [Pseudomonas aeruginosa];e-170 EC:2.1.1.80 // FRZF_MYXXA PROTEIN METHYLTRANSFERASE FRZF (EC 2.1.1.80).;4.1e-60 AE004478 48% similar to chemotaxis protein methyltransferase CheR [Escherichia coli] Chemotaxis; Pilin biosynthesis Motility & Attachment; Chemotaxis 97113801; 97368113 Class 1 PA0413_at still frameshift probable component of chemotactic signal transduction system PA0413 Hpt Pseudomonas PA0413 PA0413 /DEF=still frameshift probable component of chemotactic signal transduction system /FUNCTION=Motility & Attachment; Chemotaxis; Two-component regulatory systems 2.7.1.115 "EC:2.7.1.115; BCKD_HUMAN [3-METHYL-2-OXOBUTANOATE DEHYDROGENASE [LIPOAMIDE]] KINASE, MITOCHONDRIAL PRECURSOR (EC 2.7.1.115) (BRANCHED-CHAIN ALPHA-KETOACID DEHYDROGENASE KINASE) (BCKDHKIN) (BCKD-KINASE).;9.7e-62" "HATPase_c // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;1.2e-26 /// Hpt // Hpt domain;4.1e-213 /// response_reg // Response regulator receiver domain;7.1e-34 /// CheW // CheW-like domain;5.8e-06" d2chf__ // c.23.1.1 // CheY protein;6.21e-35 /// d1i5na_ // a.24.10.3 // Chemotaxis protein CheA P1 domain;8.71e-18 7465476; chemotaxis protein homolog - Pseudomonas aeruginosa;0.0 ; 15595610; (NC_002516) still frameshift probable component of chemotactic signal transduction system [Pseudomonas aeruginosa];0.0 AE004478 99% similar to PilL [Pseudomonas aeruginosa]; C-terminal half is 51% similar to chemotaxis protein CheA [Synechocystis sp.] Chemotaxis; Pilin biosynthesis; Two-component System Motility & Attachment; Chemotaxis; Two-component regulatory systems 97113801 Class 3 PA0414_at probable methylesterase PA0414 CheB_methylest Pseudomonas PA0414 PA0414 /DEF=probable methylesterase /FUNCTION=Chemotaxis 4871 // signal transducer activity // extended:inferred from electronic annotation; CheB_methylest; 1.7e-12 3.1.1.61 EC:3.1.1.61; Y415_BORBU PROBABLE PROTEIN-GLUTAMATE METHYLESTERASE BB0415 (EC 3.1.1.61).;4.6e-68 CheB_methylest // CheB methylesterase;1.7e-12 11498646; (NC_000917) protein-glutamate methylesterase (cheB) [Archaeoglobus fulgidus];1e-16 ; 15595611; (NC_002516) probable methylesterase [Pseudomonas aeruginosa];0.0 EC:3.1.1.61 // Y415_BORBU PROBABLE PROTEIN-GLUTAMATE METHYLESTERASE BB0415 (EC 3.1.1.61).;9.49e-49 AE004478 45% similar to CheB [Pseudomonas putida] Chemotaxis Chemotaxis Class 3 PA0415_at probable chemotaxis protein PA0415 Pseudomonas PA0415 PA0415 /DEF=probable chemotaxis protein /FUNCTION=Chemotaxis 15838544; (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c];1e-09 ; 15595612; (NC_002516) probable chemotaxis protein [Pseudomonas aeruginosa];2e-89 AE004478 Chemotaxis Chemotaxis Class 3 PA0416_at probable transcriptional regulator PA0416 HTH_AraC Pseudomonas PA0416 PA0416 /DEF=probable transcriptional regulator /FUNCTION=Chemotaxis; Transcriptional regulators "6355 // regulation of transcription, DNA-dependent // extended:Unknown; AraC_binding; 5.9e-30" "AraC_binding // AraC-like ligand binding domain;5.9e-30 /// HTH_AraC // Bacterial regulatory helix-turn-helix proteins, araC family;2.6e-14" "d1d5ya1 // a.4.1.8 // Rob transcription factor, N-terminal domain;7.45e-10" 15595613; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-148 ; 7619749; (AL352972) putative araC-family regulatory protein [Streptomyces coelicolor A3(2)];3e-31 AE004478 40% similar to regulatory protein mmsR [Pseudomonas aeruginosa] which is a member of the AraC/XylS family of transcriptional regulators Chemotaxis Chemotaxis; Transcriptional regulators Class 3 PA0417_at probable chemotaxis protein PA0417 LysE Pseudomonas PA0417 PA0417 /DEF=probable chemotaxis protein /FUNCTION=Chemotaxis 5293 // lysine permease activity // extended:inferred from electronic annotation; LysE; 3.6e-69 LysE // LysE type translocator;3.6e-69 15595614; (NC_002516) probable chemotaxis protein [Pseudomonas aeruginosa];e-114 ; 16077378; (NC_000964) ycgF [Bacillus subtilis];3e-14 numtm:5;Nin-prob:0.94443;Type: ;Span:TM from 2 to 24: Eval:0.74264/TM from 44 to 66: Eval:0.40002/TM from 71 to 89: Eval:0.42172/TM from 149 to 171: Eval:0.43752/TM from 178 to 200: Eval:0.89130 AE004479 Chemotaxis Chemotaxis Class 3 PA0418_at hypothetical protein PA0418 Pseudomonas PA0418 "PA0418 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595615; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004479 "Hypothetical, unclassified, unknown" Class 4 PA0419_at conserved hypothetical protein PA0419 Pseudomonas PA0419 "PA0419 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF558 // Protein of unknown function (DUF558);5.2e-47 15640496; (NC_002505) conserved hypothetical protein [Vibrio cholerae];6e-54 ; 15595616; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-137 AE004479 63% similar to HYPOTHETICAL PROTEIN YggJ [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0420_bioA_at 2.6.1.62 adenosylmethionine-8-amino-7-oxononanoate aminotransferase PA0420 aminotran_3 Pseudomonas PA0420 "PA0420 /GENE=bioA /DEF=adenosylmethionine-8-amino-7-oxononanoate aminotransferase /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 8483 // transaminase activity // extended:Unknown; aminotran_3; 7.1e-148 4.1.1.64 "EC:4.1.1.64; DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;1.1e-125 ; EC:5.4.3.8; GSA_XANCH GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE (EC 5.4.3.8) (GSA) (GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE) (GSA-AT).;4.3e-119 ; EC:2.6.1.62; BIOA_YEAST ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE (EC 2.6.1.62) (7,8-DIAMINO-PELARGONIC ACID AMINOTRANSFERASE) (DAPA AMINOTRANSFERASE).;1.3e-131" aminotran_3 // Aminotransferase class-III;7.1e-148 "d1qj5a_ // c.67.1.4 // Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA;9.66e-136" 15595617; (NC_002516) adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Pseudomonas aeruginosa];0.0 ; 15836794; (NC_002488) adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Xylella fastidiosa 9a5c];e-141 "EC:4.1.99.1 // TNAA_PROVU TRYPTOPHANASE (EC 4.1.99.1) (L-TRYPTOPHAN INDOLE-LYASE) (TNASE).;6.01e-39 /// EC:4.1.1.64 // DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;7.94e-135 /// EC:2.6.1.62 // BIOA_YEAST ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE (EC 2.6.1.62) (7,8-DIAMINO-PELARGONIC ACID AMINOTRANSFERASE) (DAPA AMINOTRANSFERASE).;1.51e-144" AE004479 71% similar to adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Bacillus sphaericus] Biotin metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" Class 2 PA0421_at hypothetical protein PA0421 Amino_oxidase Pseudomonas PA0421 PA0421 /DEF=hypothetical protein /FUNCTION=Putative enzymes 6118 // electron transport // extended:Unknown; Amino_oxidase; 5.5e-43 5.4.99.9 EC:5.4.99.9; GLF_MYCPN UDP-GALACTOPYRANOSE MUTASE (EC 5.4.99.9).;1e-24 ; EC:1.4.3.10; PUO_MICRU PUTRESCINE OXIDASE (EC 1.4.3.10).;2.4e-51 ; EC:1.5.3.11; PAO_MAIZE POLYAMINE OXIDASE PRECURSOR (EC 1.5.3.11).;2.4e-55 ; EC:1.3.3.4; PPOX_HUMAN PROTOPORPHYRINOGEN OXIDASE (EC 1.3.3.4) (PPO).;9e-44 Amino_oxidase // Flavin containing amine oxidoreductase;5.5e-43 "d1f8ra1 // c.3.1.2 // L-amino acid oxidase;1.32e-42 /// d1i8ta1 // c.4.1.3 // UDP-galactopyranose mutase, N-terminal domain;3.95e-12" 15595618; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 4505093; (NM_000898) monoamine oxidase B [Homo sapiens];1e-23 "EC:1.5.3.11 // PAO_MAIZE POLYAMINE OXIDASE PRECURSOR (EC 1.5.3.11).;5.9e-77 /// EC:1.4.1.13 // GLTD_ECOLI GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (EC 1.4.1.13) (GLUTAMATE SYNTHASE BETA SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN).;1.82e-24 /// EC:1.4.3.10 // PUO_MICRU PUTRESCINE OXIDASE (EC 1.4.3.10).;1.31e-59 /// EC:1.18.1.2 // ADRO_HUMAN NADPH:ADRENODOXIN OXIDOREDUCTASE, MITOCHONDRIAL PRECURSOR (EC 1.18.1.2) (ADRENODOXIN REDUCTASE) (AR) (FERREDOXIN-NADP(+) REDUCTASE).;3.35e-08 /// EC:1.3.3.4 // PPOX_HUMAN PROTOPORPHYRINOGEN OXIDASE (EC 1.3.3.4) (PPO).;6.66e-63 /// EC:5.4.99.9 // GLF_MYCPN UDP-GALACTOPYRANOSE MUTASE (EC 5.4.99.9).;1.19e-45 /// EC:1.14.99.7 // ERG1_HUMAN SQUALENE MONOOXYGENASE (EC 1.14.99.7) (SQUALENE EPOXIDASE) (SE).;8.75e-33 /// EC:1.5.99.7 // DHTM_METME TRIMETHYLAMINE DEHYDROGENASE (EC 1.5.99.7) (TMADH).;1.1e-23" AE004479 43% similar to monoamine oxidase B [Homo sapiens]. Putative enzymes Class 4 PA0422_at conserved hypothetical protein PA0422 Pseudomonas PA0422 "PA0422 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16491 // oxidoreductase activity // extended:Unknown; Ni_hydr_CYTB; 1.7e-73 Ni_hydr_CYTB // Cytochrome b561 family;1.7e-73 15801174; (NC_002655) putative cytochrome [Escherichia coli O157:H7 EDL933];1e-66 ; 15595619; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-109 numtm:4;Nin-prob:0.99652;Type: ;Span:TM from 13 to 35: Eval:0.62076/TM from 50 to 72: Eval:0.69078/TM from 92 to 114: Eval:0.64198/TM from 147 to 169: Eval:0.34613 AE004479 78% similar to putative cytochrome [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0423_at conserved hypothetical protein PA0423 YceI Pseudomonas PA0423 "PA0423 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" YceI // YceI like family;3.4e-85 "15801173; (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7 EDL933];6e-82 ; 15595620; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-107" AE004479 84% similar to hypothetical protein YceI [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0424_mexR_at multidrug resistance operon repressor MexR PA0424 MarR Pseudomonas PA0424 PA0424 /GENE=mexR /DEF=multidrug resistance operon repressor MexR /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; MarR; 6.4e-37 MarR // MarR family;6.4e-37 "d1jgsa_ // a.4.5.28 // Multiple antibiotic resistance repressor, MarR;1.1e-24" "15601758; (NC_002506) transcriptional regulator, MarR family [Vibrio cholerae];2e-08 ; 15595621; (NC_002516) multidrug resistance operon repressor MexR [Pseudomonas aeruginosa];2e-80" AE004479 Transcriptional regulators Class 1 PA0425_mexA_at RND multidrug efflux membrane fusion protein MexA precursor PA0425 HlyD Pseudomonas PA0425 PA0425 /GENE=mexA /DEF=RND multidrug efflux membrane fusion protein MexA precursor /FUNCTION=Transport of small molecules; Antibiotic resistance and susceptibility 8565 // protein transporter activity // extended:inferred from electronic annotation; HlyD; 1.3e-83 HlyD // HlyD family secretion protein;1.3e-83 5091480; (AF031417) TtgA [Pseudomonas putida];e-139 ; 15595622; (NC_002516) RND multidrug efflux membrane fusion protein MexA precursor [Pseudomonas aeruginosa];0.0 AE004479 100% identical to MexA [Pseudomonas aeruginosa] Transport of small molecules; Antibiotic resistance and susceptibility 95058196; 96050722 Class 1 PA0426_mexB_at RND multidrug efflux transporter MexB PA0426 ACR_tran Pseudomonas PA0426 PA0426 /GENE=mexB /DEF=RND multidrug efflux transporter MexB /FUNCTION=Membrane proteins; Transport of small molecules; Antibiotic resistance and susceptibility ACR_tran // AcrB/AcrD/AcrF family;0 481840; multidrug-efflux transport protein B - Pseudomonas aeruginosa;0.0 ; 15595623; (NC_002516) RND multidrug efflux transporter MexB [Pseudomonas aeruginosa];0.0 numtm:11;Nin-prob:0.18884;Type: ;Span:TM from 10 to 32: Eval:0.71689/TM from 340 to 359: Eval:0.77641/TM from 369 to 391: Eval:0.42727/TM from 438 to 460: Eval:0.79648/TM from 470 to 492: Eval:0.73482/TM from 539 to 556: Eval:0.95592/TM from 872 to 891: Eval:0.84332/TM from 898 to 920: Eval:0.32176/TM from 925 to 947: Eval:0.56380/TM from 973 to 995: Eval:0.45043/TM from 1005 to 1027: Eval:0.77527 AE004479 99% similar to MexB [Pseudomonas aeruginosa] Membrane proteins; Transport of small molecules; Antibiotic resistance and susceptibility 95058196 Class 1 PA0427_oprM_at outer membrane protein OprM precursor PA0427 OEP Pseudomonas PA0427 PA0427 /GENE=oprM /DEF=outer membrane protein OprM precursor /FUNCTION=Membrane proteins; Transport of small molecules; Antibiotic resistance and susceptibility 5215 // transporter activity // extended:traceable author statement; OEP; 2.8e-54 OEP // Outer membrane efflux protein;8.4e-115 625668; 50k outer membrane protein oprK - Pseudomonas aeruginosa;0.0 ; 15595624; (NC_002516) outer membrane protein OprM precursor [Pseudomonas aeruginosa];0.0 AE004479 62% similar to outer membrane protein OprJ [Pseudomonas aeruginosa] Membrane proteins; Transport of small molecules; Antibiotic resistance and susceptibility 96050722; 96139560 Class 1 PA0428_at probable ATP-dependent RNA helicase PA0428 helicase_C Pseudomonas PA0428 "PA0428 /DEF=probable ATP-dependent RNA helicase /FUNCTION=Transcription, RNA processing and degradation" 5524 // ATP binding // extended:inferred from electronic annotation; DEAD; 2.2e-79 DEAD // DEAD/DEAH box helicase;2.2e-79 /// helicase_C // Helicase conserved C-terminal domain;1.7e-33 d1hv8a1 // c.37.1.13 // Putative DEAD box RNA helicase;3.7e-64 15595625; (NC_002516) probable ATP-dependent RNA helicase [Pseudomonas aeruginosa];0.0 ; 15800548; (NC_002655) putative ATP-dependent RNA helicase [Escherichia coli O157:H7 EDL933];e-137 AE004480 68% similar to putative ATP-dependent RNA helicase RhlE [Escherichia coli]. "Transcription, RNA processing and degradation" 99291044; 98418442 Class 3 PA0429_at hypothetical protein PA0429 Pseudomonas PA0429 "PA0429 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595626; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004480 "Hypothetical, unclassified, unknown" Class 4 PA0430_metF_at 1.7.99.5 "5,10-methylenetetrahydrofolate reductase" PA0430 MTHFR Pseudomonas PA0430 "PA0430 /GENE=metF /DEF=5,10-methylenetetrahydrofolate reductase /FUNCTION=Central intermediary metabolism; Amino acid biosynthesis and metabolism" "8702 // 5,10-methylenetetrahydrofolate reductase (FADH) activity // extended:Unknown; 1.7.99.5; 9.07e-96 /// 4489 // methylenetetrahydrofolate reductase (NADPH) activity // extended:inferred from electronic annotation; MTHFR; 1.6e-95" 1.7.99.5 "EC:1.7.99.5; METF_STRLI 5,10-METHYLENETETRAHYDROFOLATE REDUCTASE (EC 1.7.99.5).;1.2e-86 ; EC:1.5.1.20; MTHR_HUMAN METHYLENETETRAHYDROFOLATE REDUCTASE (EC 1.5.1.20).;3.1e-92" MTHFR // Methylenetetrahydrofolate reductase;1.6e-95 d1b5ta_ // c.1.23.1 // Methylenetetrahydrofolate reductase;4.58e-92 "15595627; (NC_002516) 5,10-methylenetetrahydrofolate reductase [Pseudomonas aeruginosa];e-167 ; 15837723; (NC_002488) 5,10-methylenetetrahydrofolate reductase [Xylella fastidiosa 9a5c];5e-87" "EC:1.5.1.20 // MTHR_HUMAN METHYLENETETRAHYDROFOLATE REDUCTASE (EC 1.5.1.20).;4.22e-111 /// EC:1.7.99.5 // METF_STRLI 5,10-METHYLENETETRAHYDROFOLATE REDUCTASE (EC 1.7.99.5).;9.07e-96" AE004480 "57% similar to 5,10 methylenetetrahydrofolate reductase [Escherichia coli]" Methionine metabolism; One carbon pool by folate; Methane metabolism Central intermediary metabolism; Amino acid biosynthesis and metabolism 87109056; 84041480 Class 2 PA0431_at hypothetical protein PA0431 Pseudomonas PA0431 "PA0431 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3.1.7.2 "EC:3.1.7.2; SPOT_SYNY3 PROBABLE GUANOSINE-3,5-BIS(DIPHOSPHATE) 3-PYROPHOSPHOHYDROLASE (EC 3.1.7.2) ((PPGPP)ASE) (PENTA-PHOSPHATE GUANOSINE-3- PYROPHOSPHOHYDROLASE).;9.8e-15" 15595628; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-104 AE004480 "Hypothetical, unclassified, unknown" Class 4 PA0432_sahH_at 3.3.1.1 S-adenosyl-L-homocysteine hydrolase PA0432 AdoHcyase Pseudomonas PA0432 PA0432 /GENE=sahH /DEF=S-adenosyl-L-homocysteine hydrolase /FUNCTION=Amino acid biosynthesis and metabolism 4013 // adenosylhomocysteinase activity // extended:inferred from electronic annotation; AdoHcyase; 2.5e-118 /// 4013 // adenosylhomocysteinase activity // extended:inferred from electronic annotation; 3.3.1.1; 7.74e-165 3.3.1.1 EC:3.3.1.1; SAHH_HUMAN ADENOSYLHOMOCYSTEINASE (EC 3.3.1.1) (S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE) (ADOHCYASE).;6.6e-163 "AdoHcyase // S-adenosyl-L-homocysteine hydrolase;2.5e-118 /// AdoHcyase_NAD // S-adenosyl-L-homocysteine hydrolase, NAD binding domain;8.7e-75" d1a7aa1 // c.2.1.4 // S-adenosylhomocystein hydrolase;1.17e-36 /// d1b3ra2 // c.23.12.3 // S-adenosylhomocystein hydrolase;3.94e-110 15595629; (NC_002516) S-adenosyl-L-homocysteine hydrolase [Pseudomonas aeruginosa];0.0 ; 17506425; (NM_059554) S-adenosylhomocysteine hydrolase [Caenorhabditis elegans];e-137 EC:3.3.1.1 // SAHH_HUMAN ADENOSYLHOMOCYSTEINASE (EC 3.3.1.1) (S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE) (ADOHCYASE).;7.74e-165 AE004480 68% similar to S-adenosyl-L-homocysteine hydrolase [Rattus norvegicus] and other eucaryotic homologs; 60% to 62% similar to adenosylhomocysteine hydrolase from [Mycobacterium tuberculosis][Roseobacter denitrificans] [Rhodobacter capsulatus] and [Rhodobacter sphaeroides] Amino acid biosynthesis and metabolism 92335291; 94034925; 90087639 Class 2 PA0433_at hypothetical protein PA0433 Pseudomonas PA0433 "PA0433 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595630; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-82 numtm:2;Nin-prob:0.98196;Type:SIGNAL;Span:TM from 21 to 43: Eval:0.49890/TM from 89 to 111: Eval:0.40780 AE004480 "Hypothetical, unclassified, unknown" Class 4 PA0434_at hypothetical protein PA0434 TonB_boxC Pseudomonas PA0434 "PA0434 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 4872 // receptor activity // extended:inferred from electronic annotation; TonB_dep_Rec; 2.8e-81 TonB_dep_Rec // TonB dependent receptor;2.8e-81 d1by5a_ // f.4.3.3 // Ferric hydroxamate uptake receptor FhuA;9.55e-149 15598107; (NC_002516) probable TonB-dependent receptor [Pseudomonas aeruginosa];2e-91 ; 15595631; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004480 "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0435_at hypothetical protein PA0435 Pseudomonas PA0435 "PA0435 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF337 // Uncharacterized iron-regulated membrane protein (DUF337);9.2e-07 15595632; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:4;Nin-prob:0.94665;Type: ;Span:TM from 12 to 34: Eval:0.66185/TM from 207 to 229: Eval:0.40784/TM from 250 to 272: Eval:0.53501/TM from 460 to 482: Eval:0.32248 AE004480 "Hypothetical, unclassified, unknown" Class 4 PA0436_at probable transcriptional regulator PA0436 tetR Pseudomonas PA0436 PA0436 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; tetR; 1.4e-17 "tetR // Bacterial regulatory proteins, tetR family;1.4e-17" d1jt6b1 // a.4.1.9 // Multidrug binding protein QacR;1.7e-13 15596701; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];2e-41 ; 15595633; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-117 AE004481 54% similar to putative tet operon regulator YcdC [Escherichia coli]. Transcriptional regulators Class 3 PA0437_codA_at 3.5.4.1 cytosine deaminase PA0437 ATZ_TRZ Pseudomonas PA0437 PA0437 /GENE=codA /DEF=cytosine deaminase /FUNCTION=Nucleotide biosynthesis and metabolism 16787 // hydrolase activity // extended:Unknown; Amidohydro_1; 0.063 3.5.2.7 EC:3.5.2.7; HUTI_YERPE IMIDAZOLONEPROPIONASE (EC 3.5.2.7) (IMIDAZOLONE-5-PROPIONATE HYDROLASE).;4.5e-29 Amidohydro_1 // Amidohydrolase family;0.063 d1k6wa2 // c.1.9.5 // Cytosine deaminase catalytic domain;1.3e-114 /// d1k6wa1 // b.92.1.2 // Cytosine deaminase;7.18e-42 1657533; (U73857) cytosine deaminase [Escherichia coli];0.0 ; 15595634; (NC_002516) cytosine deaminase [Pseudomonas aeruginosa];0.0 EC:3.5.1.82 // NDED_ALCXX N-ACYL-D-GLUTAMATE DEACYLASE (EC 3.5.1.82) (N-ACYL-D-GLUTAMATE AMIDOHYDROLASE).;5.26e-53 /// EC:3.5.4.2 // ADEC_METTH PROBABLE ADENINE DEAMINASE (EC 3.5.4.2) (ADENASE) (ADENINE AMINASE).;2.45e-23 /// EC:3.5.2.7 // HUTI_YERPE IMIDAZOLONEPROPIONASE (EC 3.5.2.7) (IMIDAZOLONE-5-PROPIONATE HYDROLASE).;6.24e-29 AE004481 86% similar to E. coli codA gene product. Pyrimidine metabolism Nucleotide biosynthesis and metabolism Class 2 PA0438_codB_at cytosine permease PA0438 Transp_cyt_pur Pseudomonas PA0438 PA0438 /GENE=codB /DEF=cytosine permease /FUNCTION=Nucleotide biosynthesis and metabolism; Transport of small molecules 15205 // nucleobase transporter activity // extended:Unknown; Transp_cyt_pur; 3.9e-77 "Transp_cyt_pur // Permease for cytosine/purines, uracil, thiamine, allantoin;3.9e-77" 15595635; (NC_002516) cytosine permease [Pseudomonas aeruginosa];0.0 ; 16128321; (NC_000913) cytosine permease/transport [Escherichia coli K12];0.0 numtm:11;Nin-prob:0.99318;Type: ;Span:TM from 21 to 43: Eval:0.30041/TM from 53 to 75: Eval:0.54346/TM from 96 to 118: Eval:0.67929/TM from 128 to 150: Eval:0.62242/TM from 152 to 174: Eval:0.42998/TM from 189 to 211: Eval:0.56050/TM from 223 to 245: Eval:0.82238/TM from 255 to 277: Eval:0.82719/TM from 284 to 306: Eval:0.66565/TM from 321 to 340: Eval:0.91145/TM from 360 to 382: Eval:0.72352 AE004481 87% similar to E. coli codB gene product. Nucleotide biosynthesis and metabolism; Transport of small molecules Class 2 PA0439_at probable oxidoreductase PA0439 fer4 Pseudomonas PA0439 PA0439 /DEF=probable oxidoreductase /FUNCTION=Putative enzymes 4152 // dihydroorotate dehydrogenase activity // extended:Unknown; DHOdehase; 5.9e-09 1.3.99.11 EC:1.3.99.11; PYRD_LACPL DIHYDROOROTATE DEHYDROGENASE (EC 1.3.3.1) (DIHYDROOROTATE OXIDASE) (DHODEHASE) (DHODASE) (DHOD).;2.8e-68 ; EC:1.3.3.1; PYRD_HUMAN DIHYDROOROTATE DEHYDROGENASE PRECURSOR (EC 1.3.3.1) (DIHYDROOROTATE OXIDASE) (FRAGMENT).;4.4e-67 ; EC:1.13.12.4; LA2M_MYCSM LACTATE 2-MONOOXYGENASE (EC 1.13.12.4) (LACTATE OXIDASE).;6.5e-24 fer4 // 4Fe-4S binding domain;1.7e-05 /// DHOdehase // Dihydroorotate dehydrogenase;5.9e-09 "d1gtea5 // d.58.1.5 // Dihydropyrimidine dehydrogenase, C-terminal domain;5.96e-32 /// d1zfja1 // c.1.5.1 // Inosine monophosphate dehydrogenase (IMPDH);2.34e-12 /// d1gtea2 // c.1.4.1 // Dihydropyrimidine dehydrogenase, domain 4;6.65e-83" 13471617; (NC_002678) probable oxidoreductase [Mesorhizobium loti];e-177 ; 15595636; (NC_002516) probable oxidoreductase [Pseudomonas aeruginosa];0.0 "EC:1.3.99.11 // PYRD_LACPL DIHYDROOROTATE DEHYDROGENASE (EC 1.3.3.1) (DIHYDROOROTATE OXIDASE) (DHODEHASE) (DHODASE) (DHOD).;7.37e-79 /// EC:1.1.3.15 // GOX_SPIOL (S)-2-HYDROXY-ACID OXIDASE, PEROXISOMAL (EC 1.1.3.15) (GLYCOLATE OXIDASE) (GOX) (SHORT CHAIN ALPHA-HYDROXY ACID OXIDASE).;1.62e-12" AE004481 59% similar to putative oxidoreductase YeiA [Escherichia coli]; 53% similar to dihydropyrimidine dehydrogenase [Rattus norvegicus] Putative enzymes 94365020 Class 3 PA0440_at probable oxidoreductase PA0440 pyr_redox Pseudomonas PA0440 PA0440 /DEF=probable oxidoreductase /FUNCTION=Putative enzymes 15036 // disulfide oxidoreductase activity // extended:Unknown; pyr_redox; 2.6e-21 1.16.1.1 "EC:1.16.1.1; MERA_THIFE MERCURIC REDUCTASE (EC 1.16.1.1) (HG(II) REDUCTASE).;1.4e-58 ; EC:1.18.1.2; ADRO_HUMAN NADPH:ADRENODOXIN OXIDOREDUCTASE, MITOCHONDRIAL PRECURSOR (EC 1.18.1.2) (ADRENODOXIN REDUCTASE) (AR) (FERREDOXIN-NADP(+) REDUCTASE).;2.5e-77 ; EC:1.4.1.13; GLTD_ECOLI GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (EC 1.4.1.13) (GLUTAMATE SYNTHASE BETA SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN).;8e-88" pyr_redox // Pyridine nucleotide-disulphide oxidoreductase;2.6e-21 "d1gtea1 // a.1.2.2 // Dihydropyrimidine dehydrogenase, N-terminal domain;1.81e-38 /// d1gtea4 // c.4.1.1 // Dihydropyrimidine dehydrogenase, domain 2;2.22e-38 /// d1gtea3 // c.3.1.1 // Dihydropyrimidine dehydrogenase, domain 3;1.29e-32" 15966200; (NC_003047) PROBABLE GLUTAMATE SYNTHASE SMALL CHAIN PROTEIN [Sinorhizobium meliloti];e-122 ; 15595637; (NC_002516) probable oxidoreductase [Pseudomonas aeruginosa];0.0 "EC:5.4.99.9 // GLF_MYCPN UDP-GALACTOPYRANOSE MUTASE (EC 5.4.99.9).;6.4e-32 /// EC:1.4.3.10 // PUO_MICRU PUTRESCINE OXIDASE (EC 1.4.3.10).;6.77e-55 /// EC:1.14.13.22 // CYMO_ACISP CYCLOHEXANONE MONOOXYGENASE (EC 1.14.13.22).;4.53e-28 /// EC:1.13.12.10 // IUCD_ECOLI L-LYSINE 6-MONOOXYGENASE (EC 1.13.12.10) (LYSINE N6-HYDROXYLASE).;3.23e-23 /// EC:1.6.4.5 // TRXB_HUMAN THIOREDOXIN REDUCTASE (EC 1.6.4.5).;1.65e-43 /// EC:1.4.1.13 // GLTD_ECOLI GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (EC 1.4.1.13) (GLUTAMATE SYNTHASE BETA SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN).;1.64e-96 /// EC:1.18.1.2 // ADRO_HUMAN NADPH:ADRENODOXIN OXIDOREDUCTASE, MITOCHONDRIAL PRECURSOR (EC 1.18.1.2) (ADRENODOXIN REDUCTASE) (AR) (FERREDOXIN-NADP(+) REDUCTASE).;6.72e-95 /// EC:1.3.3.4 // PPOX_HUMAN PROTOPORPHYRINOGEN OXIDASE (EC 1.3.3.4) (PPO).;9.82e-21 /// EC:1.8.1.4 // DLDH_HUMAN DIHYDROLIPOAMIDE DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.8.1.4).;1.09e-55 /// EC:1.5.99.7 // DHTM_METME TRIMETHYLAMINE DEHYDROGENASE (EC 1.5.99.7) (TMADH).;1.38e-84" AE004481 63% similar to NADPH dependent glutamate synthase small subunit homolog [Rhodobacter capsulatus] Putative enzymes 97345887 Class 3 PA0441_at 3.5.2.2 dihydropyrimidinase PA0441 Dihydroorotase Pseudomonas PA0441 PA0441 /DEF=dihydropyrimidinase /FUNCTION=Nucleotide biosynthesis and metabolism 16787 // hydrolase activity // extended:Unknown; Amidohydro_1; 4.4e-19 /// 4157 // dihydropyrimidinase activity // extended:traceable author statement; 3.5.2.2; 1.01e-139 3.5.2.2 EC:3.5.2.2; DPYS_HUMAN DIHYDROPYRIMIDINASE (EC 3.5.2.2) (DHPASE) (HYDANTOINASE) (DHP).;2.8e-156 ; EC:3.5.1.83; NDDD_ALCXX N-ACYL-D-ASPARTATE DEACYLASE (EC 3.5.1.83) (N-ACYL-D-ASPARTATE AMIDOHYDROLASE).;4.4e-111 Amidohydro_1 // Amidohydrolase family;4.4e-19 d1k1da2 // c.1.9.6 // D-hydantoinase;1.48e-118 /// d1gkpa1 // b.92.1.3 // D-hydantoinase;5.12e-37 3334230; D-HYDANTOINASE (DIHYDROPYRIMIDINASE) (DHPASE);0.0 ; 15595638; (NC_002516) dihydropyrimidinase [Pseudomonas aeruginosa];0.0 EC:3.5.2.2 // DPYS_HUMAN DIHYDROPYRIMIDINASE (EC 3.5.2.2) (DHPASE) (HYDANTOINASE) (DHP).;1.01e-139 /// EC:3.5.1.83 // NDDD_ALCXX N-ACYL-D-ASPARTATE DEACYLASE (EC 3.5.1.83) (N-ACYL-D-ASPARTATE AMIDOHYDROLASE).;1.3e-105 /// EC:3.5.4.2 // ADEC_METTH PROBABLE ADENINE DEAMINASE (EC 3.5.4.2) (ADENASE) (ADENINE AMINASE).;8.81e-55 AE004481 95% similar to D-hydantoinase [Pseudomonas putida] Pantothenate and CoA biosynthesis; Pyrimidine metabolism; Beta-Alanine metabolism Nucleotide biosynthesis and metabolism 94213464; 91244138 Class 2 PA0442_r_at hypothetical protein PA0442 Pseudomonas PA0442 "PA0442 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595639; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];6e-14 AE004481 "Hypothetical, unclassified, unknown" Class 4 PA0443_at probable transporter PA0443 Transp_cyt_pur Pseudomonas PA0443 PA0443 /DEF=probable transporter /FUNCTION=Membrane proteins; Transport of small molecules 15205 // nucleobase transporter activity // extended:Unknown; Transp_cyt_pur; 2.6e-96 "Transp_cyt_pur // Permease for cytosine/purines, uracil, thiamine, allantoin;2.6e-96" 15595640; (NC_002516) probable transporter [Pseudomonas aeruginosa];0.0 ; 16126586; (NC_002696) cytosine/purines/uracil/thiamine/allantoin permease family protein [Caulobacter crescentus CB15];3e-94 numtm:9;Nin-prob:0.91002;Type: ;Span:TM from 50 to 72: Eval:0.59606/TM from 125 to 147: Eval:0.84893/TM from 160 to 182: Eval:0.76357/TM from 232 to 254: Eval:0.40054/TM from 316 to 338: Eval:0.51696/TM from 351 to 373: Eval:0.85324/TM from 393 to 415: Eval:0.79401/TM from 432 to 454: Eval:0.69507/TM from 464 to 481: Eval:0.67755 AE004481 56% similar to YwoE hypothetical permease [Bacillus subtilis] Membrane proteins; Transport of small molecules Class 3 PA0444_at N-carbamoyl-beta-alanine amidohydrolase PA0444 Peptidase_M20 Pseudomonas PA0444 PA0444 /DEF=N-carbamoyl-beta-alanine amidohydrolase /FUNCTION=Nucleotide biosynthesis and metabolism 8237 // metallopeptidase activity // extended:Unknown; Peptidase_M20; 5.3e-62 3.4.17.11 EC:3.4.17.11; CBPG_PSES6 CARBOXYPEPTIDASE G2 PRECURSOR (EC 3.4.17.11) (FOLATE HYDROLASE G2) (PTEROYLMONOGLUTAMIC ACID HYDROLASE G2) (GLUTAMATE CARBOXYPEPTIDASE).;9.6e-48 ; EC:3.5.1.14; ACY1_HUMAN AMINOACYLASE-1 (EC 3.5.1.14) (N-ACYL-L-AMINO-ACID AMIDOHYDROLASE) (ACY-1).;7.2e-26 Peptidase_M20 // Peptidase family M20/M25/M40;5.3e-62 "d1cg2a1 // c.56.5.4 // Carboxypeptidase G2, catalytic domain;2.12e-26 /// d1cg2a2 // d.58.19.1 // Carboxypeptidase G2;7.84e-09" 15595641; (NC_002516) N-carbamoyl-beta-alanine amidohydrolase [Pseudomonas aeruginosa];0.0 ; 15889656; (NC_003062) AGR_C_4327p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];e-110 AE004481 55% similar to DL-hydantoinase (N-carbamyl-L-amino acid amidohydrolase) [Pseudomonas sp.] Pyrimidine metabolism Nucleotide biosynthesis and metabolism 91244138 Class 2 PA0445_s_at probable transposase PA0445 Transposase_20 Pseudomonas PA0445 "PA0445 /DEF=probable transposase /FUNCTION=Related to phage, transposon, or plasmid" 3677 // DNA binding // extended:inferred from electronic annotation; Transposase_20; 2e-35 Transposase_20 // Transposase IS116/IS110/IS902 family;2e-35 15595642; (NC_002516) probable transposase [Pseudomonas aeruginosa];0.0 ; 16126973; (NC_002696) IS1111A/IS1328/IS1533 family transposase [Caulobacter crescentus CB15];1e-89 AE004482 65% similar to transposase for insertion sequence element IS1111a [Coxiella burnetii]. "Related to phage, transposon, or plasmid" 92380927 Class 3 PA0446_at conserved hypothetical protein PA0446 CAIB-BAIF Pseudomonas PA0446 "PA0446 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 8152 // metabolism // extended:inferred from electronic annotation; CoA_transf_3; 1.1e-72 4.2.1.89 EC:4.2.1.89; CAIB_ECOLI L-CARNITINE DEHYDRATASE (EC 4.2.1.89) (L-CDHT).;9.8e-122 CoA_transf_3 // CoA-transferase family III;1.1e-72 14587414; (AB026669) L-carnitine dehydrogenase-like protein [Acinetobacter sp. NCIMB9871];e-131 ; 15595643; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 EC:4.2.1.89 // CAIB_ECOLI L-CARNITINE DEHYDRATASE (EC 4.2.1.89) (L-CDHT).;1.76e-148 AE004482 68% similar to an unknown protein from [Sphingomonas aromaticivorans] "Hypothetical, unclassified, unknown" Class 4 PA0447_gcdH_at 1.3.99.7 glutaryl-CoA dehydrogenase PA0447 Acyl-CoA_dh_M Pseudomonas PA0447 PA0447 /GENE=gcdH /DEF=glutaryl-CoA dehydrogenase /FUNCTION=Amino acid biosynthesis and metabolism; Carbon compound catabolism; Fatty acid and phospholipid metabolism 4361 // glutaryl-CoA dehydrogenase activity // extended:inferred from electronic annotation; 1.3.99.7; 1.39e-124 /// 3995 // acyl-CoA dehydrogenase activity // extended:inferred from electronic annotation; Acyl-CoA_dh_N; 6.1e-25 1.3.99.7 "EC:1.3.99.7; GCDH_HUMAN GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.3.99.7) (GCD).;8.8e-121" "Acyl-CoA_dh // Acyl-CoA dehydrogenase, C-terminal domain;2.8e-47 /// Acyl-CoA_dh_N // Acyl-CoA dehydrogenase, N-terminal domain;6.1e-25 /// Acyl-CoA_dh_M // Acyl-CoA dehydrogenase, middle domain;3.9e-22" d1ivha2 // e.6.1.1 // Isovaleryl-coa dehydrogenase;8.68e-75 /// d1jqia1 // a.29.3.1 // Butyryl-CoA dehydrogenase;5.14e-45 16264595; (NC_003078) putative glutaryl-CoA dehydrogenase protein [Sinorhizobium meliloti];e-166 ; 15595644; (NC_002516) glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa];0.0 "EC:1.3.3.6 // CAOP_HUMAN ACYL-COENZYME A OXIDASE 1, PEROXISOMAL (EC 1.3.3.6) (PALMITOYL-COA OXIDASE) (AOX).;5.69e-122 /// EC:1.3.99.7 // GCDH_HUMAN GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.3.99.7) (GCD).;1.39e-124" AE004482 "78% similar to GcdH gene product of humans, mice, and pigs" Fatty acid metabolism; Lysine degradation; Tryptophan metabolism Amino acid biosynthesis and metabolism; Carbon compound catabolism; Fatty acid and phospholipid metabolism 97055882 Class 2 PA0448_at probable transcriptional regulator PA0448 LysR_substrate Pseudomonas PA0448 PA0448 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 8e-23 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;8e-23 /// LysR_substrate // LysR substrate binding domain;6.6e-44" 15890564; (NC_003063) AGR_L_895p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];1e-69 ; 15595645; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-173 AE004482 55% similar to GcvA gene product of E. coli. Transcriptional regulators Class 3 PA0449_at hypothetical protein PA0449 Acyl-CoA_hydro Pseudomonas PA0449 "PA0449 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3824 // catalytic activity // extended:Unknown; 4HBT; 5.3e-18 4HBT // Thioesterase superfamily;5.3e-18 15595646; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-103 ; 15613361; (NC_002570) acyl-CoA hydrolase [Bacillus halodurans];1e-09 EC:3.1.2.2 // CTE2_HUMAN CYTOSOLIC ACYL COENZYME A THIOESTER HYDROLASE (EC 3.1.2.2) (LONG CHAIN ACYL-COA THIOESTER HYDROLASE) (CTE-II) (BRAIN ACYL-COA HYDROLASE) (BACH).;5.31e-36 AE004482 "Hypothetical, unclassified, unknown" Class 4 PA0450_at probable phosphate transporter PA0450 PHO4 Pseudomonas PA0450 PA0450 /DEF=probable phosphate transporter /FUNCTION=Membrane proteins; Transport of small molecules 5315 // inorganic phosphate transporter activity // extended:inferred from electronic annotation; PHO4; 6.6e-64 PHO4 // Phosphate transporter family;6.6e-64 13473138; (NC_002678) phosphate transporter [Mesorhizobium loti];e-175 ; 15595647; (NC_002516) probable phosphate transporter [Pseudomonas aeruginosa];0.0 numtm:10;Nin-prob:0.82675;Type: ;Span:TM from 29 to 51: Eval:0.53708/TM from 61 to 83: Eval:0.74207/TM from 116 to 138: Eval:0.34895/TM from 148 to 170: Eval:0.66768/TM from 177 to 194: Eval:0.75515/TM from 209 to 231: Eval:0.97091/TM from 251 to 268: Eval:0.93650/TM from 278 to 295: Eval:0.96224/TM from 422 to 441: Eval:0.92135/TM from 514 to 536: Eval:0.89227 AE004482 60% similar to low-affinity phosphate transporter PitA [Escherichia coli]. Membrane proteins; Transport of small molecules Class 3 PA0451_at conserved hypothetical protein PA0451 DUF107 Pseudomonas PA0451 "PA0451 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" NfeD // Nodulation efficiency protein D (NfeD);5.6e-235 11280431; NfeD protein - Rhizobium etli plasmid pTAL182c;e-119 ; 15595648; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:6;Nin-prob:0.9789;Type: ;Span:TM from 7 to 29: Eval:0.63642/TM from 101 to 123: Eval:0.35375/TM from 240 to 262: Eval:0.49253/TM from 282 to 304: Eval:0.88346/TM from 311 to 333: Eval:0.94046/TM from 343 to 365: Eval:0.80015 AE004482 65% similar to NfeD gene product of [Rhizobium etli] "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0452_at probable stomatin-like protein PA0452 Band_7 Pseudomonas PA0452 PA0452 /DEF=probable stomatin-like protein /FUNCTION=Membrane proteins Band_7 // SPFH domain / Band 7 family;7.6e-78 16264862; (NC_003078) putative stomatin-like protein [Sinorhizobium meliloti];8e-94 ; 15595649; (NC_002516) probable stomatin-like protein [Pseudomonas aeruginosa];e-143 numtm:1;Nin-prob:0.33282;Type:SIGNAL;Span:TM from 4 to 26: Eval:0.69467 AE004482 89% similar to stomatin-like protein of [Rhizobium etli]; 67% similar to stomatin [Homo sapiens] Membrane proteins Class 3 PA0453_at hypothetical protein PA0453 Pseudomonas PA0453 "PA0453 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595650; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-126 AE004482 "Hypothetical, unclassified, unknown" Class 4 PA0454_at conserved hypothetical protein PA0454 Pseudomonas PA0454 "PA0454 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF893 // Bacterial membrane protein of unknown function (DUF893);0 15595651; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15838572; (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c];0.0 numtm:9;Nin-prob:0.6166;Type: ;Span:TM from 20 to 38: Eval:0.65133/TM from 63 to 85: Eval:0.81364/TM from 89 to 111: Eval:0.78108/TM from 116 to 133: Eval:0.96319/TM from 148 to 170: Eval:0.52571/TM from 395 to 417: Eval:0.76508/TM from 461 to 483: Eval:0.69917/TM from 490 to 509: Eval:0.86316/TM from 519 to 538: Eval:0.58975 AE004483 58% similar to hypothetical protein YccS [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0455_dbpA_at RNA helicase DbpA PA0455 DbpA Pseudomonas PA0455 "PA0455 /GENE=dbpA /DEF=RNA helicase DbpA /FUNCTION=Transcription, RNA processing and degradation" 5524 // ATP binding // extended:inferred from electronic annotation; DEAD; 1.5e-78 helicase_C // Helicase conserved C-terminal domain;5.5e-30 /// DbpA // DbpA RNA binding domain;2.4e-37 /// DEAD // DEAD/DEAH box helicase;1.5e-78 d1hv8a1 // c.37.1.13 // Putative DEAD box RNA helicase;8.55e-69 15595652; (NC_002516) RNA helicase DbpA [Pseudomonas aeruginosa];0.0 ; 15642559; (NC_002505) ATP-dependent RNA helicase DbpA [Vibrio cholerae];e-138 AE004483 69% similar to RNA helicase DbpA [Escherichia coli]. "Transcription, RNA processing and degradation" 94074560 Class 2 PA0456_at probable cold-shock protein PA0456 CSD Pseudomonas PA0456 "PA0456 /DEF=probable cold-shock protein /FUNCTION=Adaptation, protection; Transcriptional regulators" 3677 // DNA binding // extended:inferred from electronic annotation; CSD; 1.2e-38 CSD // 'Cold-shock' DNA-binding domain;1.2e-38 d1c9oa_ // b.40.4.5 // Major cold shock protein;5.66e-23 15595653; (NC_002516) probable cold-shock protein [Pseudomonas aeruginosa];7e-35 ; 15598462; (NC_002516) cold acclimation protein B [Pseudomonas aeruginosa];4e-25 AE004483 86% similar to cold acclimation protein B [Pseudomonas fragi]. "Adaptation, protection; Transcriptional regulators" Class 3 PA0457_at hypothetical protein PA0457 Pseudomonas PA0457 "PA0457 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF785 // Protein of unknown function (DUF785);2.8e-75 15595659; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-16 ; 15595654; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-96 AE004483 "Hypothetical, unclassified, unknown" Class 4 PA0458_at probable MFS transporter PA0458 Pseudomonas PA0458 PA0458 /DEF=probable MFS transporter /FUNCTION=Membrane proteins; Transport of small molecules 15595655; (NC_002516) probable MFS transporter [Pseudomonas aeruginosa];0.0 ; 16131622; (NC_000913) putative transport protein [Escherichia coli K12];e-127 numtm:14;Nin-prob:0.85965;Type: ;Span:TM from 17 to 36: Eval:0.72950/TM from 51 to 73: Eval:0.74960/TM from 80 to 102: Eval:0.63300/TM from 106 to 128: Eval:0.70287/TM from 140 to 162: Eval:0.59176/TM from 167 to 189: Eval:0.41305/TM from 202 to 219: Eval:0.92015/TM from 229 to 248: Eval:0.91316/TM from 268 to 290: Eval:0.54379/TM from 295 to 317: Eval:0.66118/TM from 329 to 351: Eval:0.91623/TM from 356 to 378: Eval:0.61614/TM from 399 to 421: Eval:0.54769/TM from 436 to 458: Eval:0.34557 AE004483 67% similar to putative drug resistance translocase YieO [Escherichia coli] Membrane proteins; Transport of small molecules Class 3 PA0459_at probable ClpA/B protease ATP binding subunit PA0459 Clp_N Pseudomonas PA0459 "PA0459 /DEF=probable ClpA/B protease ATP binding subunit /FUNCTION=Translation, post-translational modification, degradation" 3754 // chaperone activity // extended:inferred from electronic annotation; Clp_N; 1.5e-07 Clp_N // Clp amino terminal domain;9.5e-29 /// AAA // ATPase family associated with various cellular activities (AAA);7.8e-23 d1jbka_ // c.37.1.13 // ClpB;1.61e-62 7479176; clp proteinase ATP-binding chain - Streptomyces coelicolor;0.0 ; 15595656; (NC_002516) probable ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa];0.0 EC:3.4.21.53 // LON_VIBPA ATP-DEPENDENT PROTEASE LA (EC 3.4.21.53).;4.01e-133 AE004483 70% similar to ClpC adenosine triphosphatase [Bacillus subtilis] "Translation, post-translational modification, degradation" 94253006 Class 3 PA0460_at hypothetical protein PA0460 Pseudomonas PA0460 "PA0460 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15642564; (NC_002505) hypothetical protein [Vibrio cholerae];8e-14 ; 15595657; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-102 AE004484 "Hypothetical, unclassified, unknown" Class 4 PA0461_at conserved hypothetical protein PA0461 Acyltransferase Pseudomonas PA0461 "PA0461 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 8415 // acyltransferase activity // extended:Unknown; Acyltransferase; 4.3e-19 2.3.1.51 EC:2.3.1.51; PLCB_HUMAN 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE BETA (EC 2.3.1.51) (1- AGP ACYLTRANSFERASE 2) (1-AGPAT 2) (LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE-BETA) (LPAAT-BETA) (1-ACYLGLYCEROL-3-PHOSPHATE O- ACYLTRANSFERASE 2).;2.1e-12 Acyltransferase // Acyltransferase;4.3e-19 15596031; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];3e-75 ; 15595658; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-174 numtm:1;Nin-prob:0.7914;Type:SIGNAL;Span:TM from 7 to 29: Eval:0.96770 EC:2.3.1.51 // PLCB_HUMAN 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE BETA (EC 2.3.1.51) (1- AGP ACYLTRANSFERASE 2) (1-AGPAT 2) (LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE-BETA) (LPAAT-BETA) (1-ACYLGLYCEROL-3-PHOSPHATE O- ACYLTRANSFERASE 2).;1.82e-35 AE004484 63% similar to hypothetical protein YihG [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0462_at hypothetical protein PA0462 Pseudomonas PA0462 "PA0462 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF785 // Protein of unknown function (DUF785);8.4e-81 15595659; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-131 ; 15596965; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-38 AE004484 "Hypothetical, unclassified, unknown" Class 4 PA0463_creB_at two-component response regulator CreB PA0463 response_reg Pseudomonas PA0463 PA0463 /GENE=creB /DEF=two-component response regulator CreB /FUNCTION=Transcriptional regulators; Two-component regulatory systems 156 // two-component response regulator activity // extended:inferred from electronic annotation; response_reg; 4.9e-34 "response_reg // Response regulator receiver domain;4.9e-34 /// trans_reg_C // Transcriptional regulatory protein, C terminal;3.8e-18" d1gxqa_ // a.4.6.1 // PhoB;5.99e-23 /// d1b00a_ // c.23.1.1 // PhoB receiver domain;2.35e-32 1903396; (U67069) response regulator protein [Aeromonas jandaei];1e-63 ; 15595660; (NC_002516) two-component response regulator CreB [Pseudomonas aeruginosa];e-127 AE004484 71% similar to Aeromonas jandaei response regulator protein; 68% similar to Ecoli catabolic regulation response regulator creB gene product Two-component System Transcriptional regulators; Two-component regulatory systems 95334362 Class 2 PA0464_creC_at two-component sensor CreC PA0464 HATPase_c Pseudomonas PA0464 PA0464 /GENE=creC /DEF=two-component sensor CreC /FUNCTION=Two-component regulatory systems 4871 // signal transducer activity // extended:inferred from electronic annotation; HAMP; 5e-13 "HAMP // HAMP domain;5e-13 /// HisKA // His Kinase A (phosphoacceptor) domain;6e-18 /// HATPase_c // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;2.9e-25" d1bxda_ // d.122.1.3 // Histidine kinase domain of the osmosensor EnvZ;6.09e-29 15804970; (NC_002655) catabolite repression sensor kinase for PhoB; alternative sensor for pho regulon [Escherichia coli O157:H7 EDL933];e-121 ; 15595661; (NC_002516) two-component sensor CreC [Pseudomonas aeruginosa];0.0 numtm:2;Nin-prob:0.02426;Type:SIGNAL;Span:TM from 4 to 26: Eval:0.77228/TM from 184 to 206: Eval:0.90863 AE004484 67% similar to Escherichia coli pho regulon positive regulatory protein creC Two-component System Two-component regulatory systems Class 2 PA0465_creD_at inner membrane protein CreD PA0465 Pseudomonas PA0465 PA0465 /GENE=creD /DEF=inner membrane protein CreD /FUNCTION=Membrane proteins CreD // Inner membrane protein CreD;3.2e-283 15595662; (NC_002516) inner membrane protein CreD [Pseudomonas aeruginosa];0.0 ; 9662896; (AJ276632) putative inner membrane protein [Aeromonas hydrophila];9e-92 numtm:6;Nin-prob:0.97622;Type: ;Span:TM from 5 to 27: Eval:0.49280/TM from 309 to 326: Eval:0.75603/TM from 333 to 355: Eval:0.62920/TM from 360 to 382: Eval:0.86832/TM from 389 to 408: Eval:0.64297/TM from 412 to 431: Eval:0.93805 AE004484 58% similar to Ecoli INNER MEMBRANE PROTEIN CreD Membrane proteins 85157583 Class 2 PA0466_at hypothetical protein PA0466 Pseudomonas PA0466 "PA0466 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595663; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-53 numtm:2;Nin-prob:0.95816;Type:SIGNAL;Span:TM from 7 to 29: Eval:0.79629/TM from 80 to 99: Eval:0.45477 AE004484 "Hypothetical, unclassified, unknown" Class 4 PA0467_at conserved hypothetical protein PA0467 GST_N Pseudomonas PA0467 "PA0467 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 5.2.1.2 EC:5.2.1.2; MAAI_HUMAN MALEYLACETOACETATE ISOMERASE (EC 5.2.1.2) (MAAI) (GLUTATHIONE S- TRANSFERASE ZETA 1) (EC 2.5.1.18) (GSTZ1-1).;1.1e-21 ; EC:2.5.1.18; MAAI_HUMAN MALEYLACETOACETATE ISOMERASE (EC 5.2.1.2) (MAAI) (GLUTATHIONE S- TRANSFERASE ZETA 1) (EC 2.5.1.18) (GSTZ1-1).;1.3e-21 ; EC:4.5.1.3; DCMA_METSP DICHLOROMETHANE DEHALOGENASE (EC 4.5.1.3) (DCM DEHALOGENASE).;1.7e-19 d1jlwa2 // c.47.1.5 // Glutathione S-transferase;6.23e-11 13472368; (NC_002678) hypothetical protein [Mesorhizobium loti];6e-27 ; 15595664; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-118 EC:2.5.1.18 // MAAI_HUMAN MALEYLACETOACETATE ISOMERASE (EC 5.2.1.2) (MAAI) (GLUTATHIONE S- TRANSFERASE ZETA 1) (EC 2.5.1.18) (GSTZ1-1).;1.89e-31 /// EC:5.2.1.2 // MAAI_HUMAN MALEYLACETOACETATE ISOMERASE (EC 5.2.1.2) (MAAI) (GLUTATHIONE S- TRANSFERASE ZETA 1) (EC 2.5.1.18) (GSTZ1-1).;1.9e-31 /// EC:4.5.1.3 // DCMA_METSP DICHLOROMETHANE DEHALOGENASE (EC 4.5.1.3) (DCM DEHALOGENASE).;8.53e-26 AE004484 49% similar to hypothetical protein YibF [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0468_at hypothetical protein PA0468 Pseudomonas PA0468 "PA0468 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3.1.1.17 EC:3.1.1.17; GNL_ZYMMO GLUCONOLACTONASE PRECURSOR (EC 3.1.1.17) (D-GLUCONO-DELTA-LACTONE LACTONOHYDROLASE).;4.3e-07 16331258; (NC_000911) virginiamycin B hydrolase; Vgb [Synechocystis sp. PCC 6803];3e-41 ; 15595665; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 EC:3.1.1.17 // GNL_ZYMMO GLUCONOLACTONASE PRECURSOR (EC 3.1.1.17) (D-GLUCONO-DELTA-LACTONE LACTONOHYDROLASE).;1.96e-34 AE004484 48% similar to hypothetical protein [Synechocystis sp.] "Hypothetical, unclassified, unknown" Class 4 PA0469_at hypothetical protein PA0469 Pseudomonas PA0469 "PA0469 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595666; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-164 AE004484 "Hypothetical, unclassified, unknown" Class 4 PA0470_at probable hydroxamate-type ferrisiderophore receptor PA0470 TonB_boxC Pseudomonas PA0470 PA0470 /DEF=probable hydroxamate-type ferrisiderophore receptor /FUNCTION=Transport of small molecules 4872 // receptor activity // extended:inferred from electronic annotation; TonB_dep_Rec; 1.9e-137 TonB_dep_Rec // TonB dependent receptor;1.9e-137 d1by5a_ // f.4.3.3 // Ferric hydroxamate uptake receptor FhuA;3.06e-175 2981048; (AF051691) hydroxamate-type ferrisiderophore receptor [Pseudomonas aeruginosa];0.0 ; 15595667; (NC_002516) probable hydroxamate-type ferrisiderophore receptor [Pseudomonas aeruginosa];0.0 AE004484 98% similar to hydroxamate-type ferrisiderophore receptor [Pseudomonas aeruginosa]; 54% similar to Bradyrhizobium japonicum fegA gene product; 54% similar to ferrichrome-iron receptor [Salmonella paratyphi] Transport of small molecules 98348446; 96210657 Class 3 PA0471_at probable transmembrane sensor PA0471 Pseudomonas PA0471 PA0471 /DEF=probable transmembrane sensor /FUNCTION=Membrane proteins; Transcriptional regulators; Two-component regulatory systems FecR // FecR protein;1.1e-151 15595668; (NC_002516) probable transmembrane sensor [Pseudomonas aeruginosa];0.0 ; 2981047; (AF051691) transmembrane sensor [Pseudomonas aeruginosa];e-180 numtm:1;Nin-prob:0.96701;Type: ;Span:TM from 88 to 110: Eval:0.56875 AE004485 99% similar to transmembrane sensor FiuR [Pseudomonas aeruginosa]; 49% similar to pupR gene product [Pseudomonas putida]; 46% simialr to fecR gene product [Escherichia coli] Two-component System Membrane proteins; Transcriptional regulators; Two-component regulatory systems 96210657 Class 3 PA0472_at "probable sigma-70 factor, ECF subfamily" PA0472 Pseudomonas PA0472 "PA0472 /DEF=probable sigma-70 factor, ECF subfamily /FUNCTION=Transcriptional regulators" "sigma70_r4 // Sigma-70, region 4;4.4e-12 /// sigma70_r2 // Sigma-70 region 2;2e-13" "15595669; (NC_002516) probable sigma-70 factor, ECF subfamily [Pseudomonas aeruginosa];6e-94 ; 2981046; (AF051691) ECF sigma factor [Pseudomonas aeruginosa];2e-88" AE004485 97% similar to ECF sigma factor [Pseudomonas aeruginosa]; 67% similar to putative sigma factor FecI [Escherichia coli]. Two-component System Transcriptional regulators 94298771; 96210657; 94329558 Class 3 PA0473_at probable glutathione S-transferase PA0473 GST_N Pseudomonas PA0473 PA0473 /DEF=probable glutathione S-transferase /FUNCTION=Putative enzymes 2.5.1.18 EC:2.5.1.18; MAAI_HUMAN MALEYLACETOACETATE ISOMERASE (EC 5.2.1.2) (MAAI) (GLUTATHIONE S- TRANSFERASE ZETA 1) (EC 2.5.1.18) (GSTZ1-1).;6.1e-40 ; EC:4.5.1.3; DCMA_METSP DICHLOROMETHANE DEHALOGENASE (EC 4.5.1.3) (DCM DEHALOGENASE).;1.7e-49 ; EC:5.2.1.2; MAAI_HUMAN MALEYLACETOACETATE ISOMERASE (EC 5.2.1.2) (MAAI) (GLUTATHIONE S- TRANSFERASE ZETA 1) (EC 2.5.1.18) (GSTZ1-1).;6.4e-40 "GST_N // Glutathione S-transferase, N-terminal domain;8.7e-11" d1aw9_2 // c.47.1.5 // Glutathione S-transferase;1.27e-18 /// d1aw9_1 // a.45.1.1 // Glutathione S-transferase;1.61e-15 2981045; (AF051691) stress factor A [Pseudomonas aeruginosa];e-136 ; 15595670; (NC_002516) probable glutathione S-transferase [Pseudomonas aeruginosa];e-143 EC:2.5.1.18 // MAAI_HUMAN MALEYLACETOACETATE ISOMERASE (EC 5.2.1.2) (MAAI) (GLUTATHIONE S- TRANSFERASE ZETA 1) (EC 2.5.1.18) (GSTZ1-1).;2.84e-44 /// EC:4.5.1.3 // DCMA_METSP DICHLOROMETHANE DEHALOGENASE (EC 4.5.1.3) (DCM DEHALOGENASE).;2.13e-48 /// EC:5.2.1.2 // MAAI_HUMAN MALEYLACETOACETATE ISOMERASE (EC 5.2.1.2) (MAAI) (GLUTATHIONE S- TRANSFERASE ZETA 1) (EC 2.5.1.18) (GSTZ1-1).;2.61e-44 AE004485 96% similar to stress factor A [Pseudomonas aeruginosa]; 52% similar to glutathione-S-transferase [Triticum aestivum] Putative enzymes 96210657 Class 3 PA0474_at hypothetical protein PA0474 Pseudomonas PA0474 "PA0474 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3824 // catalytic activity // extended:Unknown; 4HBT; 2.9e-19 4HBT // Thioesterase superfamily;2.9e-19 15595671; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];7e-74 ; 16127539; (NC_002696) conserved hypothetical protein [Caulobacter crescentus CB15];4e-12 AE004485 "Hypothetical, unclassified, unknown" Class 4 PA0475_at probable transcriptional regulator PA0475 tetR Pseudomonas PA0475 PA0475 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; tetR; 1.1e-10 "tetR // Bacterial regulatory proteins, tetR family;1.1e-10" 15595672; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-102 ; 13476773; (NC_002678) transcriptional regulator [Mesorhizobium loti];2e-18 AE004485 47% similar to hypothetical protein Rv0196 [Mycobacterium tuberculosis]. Transcriptional regulators Class 3 PA0476_at probable permease PA0476 Transp_cyt_pur Pseudomonas PA0476 PA0476 /DEF=probable permease /FUNCTION=Transport of small molecules 15205 // nucleobase transporter activity // extended:Unknown; Transp_cyt_pur; 4.7e-66 "Transp_cyt_pur // Permease for cytosine/purines, uracil, thiamine, allantoin;4.7e-66" 15595673; (NC_002516) probable permease [Pseudomonas aeruginosa];0.0 ; 15021235; (AL596248) putative allantoin permease [Streptomyces coelicolor];e-164 numtm:10;Nin-prob:0.47375;Type: ;Span:TM from 142 to 164: Eval:0.61257/TM from 200 to 222: Eval:0.86122/TM from 237 to 259: Eval:0.86909/TM from 272 to 294: Eval:0.33994/TM from 309 to 331: Eval:0.90459/TM from 344 to 366: Eval:0.96065/TM from 386 to 408: Eval:0.97988/TM from 429 to 451: Eval:0.76342/TM from 455 to 477: Eval:0.74760/TM from 537 to 554: Eval:0.75896 AE004485 54% similar to YwoE HYPOTHETICAL PERMEASE PROTEIN [Bacillus subtilis] Transport of small molecules Class 3 PA0477_at probable transcriptional regulator PA0477 LysR_substrate Pseudomonas PA0477 PA0477 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 1.9e-17 "LysR_substrate // LysR substrate binding domain;3.8e-26 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;1.9e-17" 15595674; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-176 ; 15600382; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];7e-48 AE004485 48% similar to MexT protein [Pseudomonas aeruginosa] and 47% similar to DNA-binding protein NahR [Pseudomonas putida]. Transcriptional regulators Class 3 PA0478_at probable N-acetyltransferase PA0478 Acetyltransf Pseudomonas PA0478 PA0478 /DEF=probable N-acetyltransferase /FUNCTION=Putative enzymes 8080 // N-acetyltransferase activity // extended:non-traceable author statement; Acetyltransf; 5.8e-19 2.3.1.57 EC:2.3.1.57; ATDA_HUMAN DIAMINE ACETYLTRANSFERASE (EC 2.3.1.57) (SPERMIDINE/SPERMINE N1- ACETYLTRANSFERASE) (SSAT) (PUTRESCINE ACETYLTRANSFERASE).;4.9e-35 Acetyltransf // Acetyltransferase (GNAT) family;5.8e-19 d1qsma_ // d.108.1.1 // Histone acetyltransferase HPA2;5.05e-41 15595675; (NC_002516) probable N-acetyltransferase [Pseudomonas aeruginosa];1e-88 ; 15964552; (NC_003047) PUTATIVE ACETYLTRANSFERASE PROTEIN [Sinorhizobium meliloti];9e-50 EC:2.3.1.57 // ATDA_HUMAN DIAMINE ACETYLTRANSFERASE (EC 2.3.1.57) (SPERMIDINE/SPERMINE N1- ACETYLTRANSFERASE) (SSAT) (PUTRESCINE ACETYLTRANSFERASE).;1.44e-43 AE004485 54% similar to diamine N-acetyltransferase [Homo sapiens] Putative enzymes 91054348 Class 3 PA0479_at probable transcriptional regulator PA0479 HTH_1 Pseudomonas PA0479 PA0479 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 7e-20 "LysR_substrate // LysR substrate binding domain;3.7e-25 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;7e-20" 13472251; (NC_002678) probable transcriptional regulator [Mesorhizobium loti];e-109 ; 15595676; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];0.0 AE004485 46% similar to putative transcriptional regulator YhaJ [Escherichia coli]. Transcriptional regulators Class 3 PA0480_at probable hydrolase PA0480 abhydrolase Pseudomonas PA0480 PA0480 /DEF=probable hydrolase /FUNCTION=Putative enzymes 3.1.1.24 EC:3.1.1.24; ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;6.4e-61 ; EC:1.11.1.10; PRXC_SYNY3 PUTATIVE NON-HEME CHLOROPEROXIDASE (EC 1.11.1.10) (CHLORIDE PEROXIDASE).;8.2e-49 ; EC:3.8.1.5; YM96_MYCTU PUTATIVE HALOALKANE DEHALOGENASE (EC 3.8.1.5).;4.9e-48 ; EC:1.13.12.5; LUCI_RENRE RENILLA-LUCIFERIN 2-MONOOXYGENASE (EC 1.13.12.5) (RENILLA-TYPE LUCIFERASE).;1.2e-41 abhydrolase // alpha/beta hydrolase fold;2.9e-22 d1a88a_ // c.69.1.12 // Chloroperoxidase L;2.76e-58 13472250; (NC_002678) probable beta-ketoadipate enol-lactone hydrolase [Mesorhizobium loti];2e-96 ; 15595677; (NC_002516) probable hydrolase [Pseudomonas aeruginosa];e-148 EC:2.3.1.31 // MET2_YEAST HOMOSERINE O-ACETYLTRANSFERASE (EC 2.3.1.31) (HOMOSERINE O-TRANS- ACETYLASE).;8.6e-44 /// EC:3.8.1.5 // YM96_MYCTU PUTATIVE HALOALKANE DEHALOGENASE (EC 3.8.1.5).;1.6e-54 /// EC:1.11.1.10 // PRXC_SYNY3 PUTATIVE NON-HEME CHLOROPEROXIDASE (EC 1.11.1.10) (CHLORIDE PEROXIDASE).;2.23e-57 /// EC:1.13.12.5 // LUCI_RENRE RENILLA-LUCIFERIN 2-MONOOXYGENASE (EC 1.13.12.5) (RENILLA-TYPE LUCIFERASE).;1.63e-38 /// EC:3.1.1.24 // ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;1.11e-64 /// EC:3.3.2.3 // HYES_HUMAN SOLUBLE EPOXIDE HYDROLASE (SEH) (EC 3.3.2.3) (EPOXIDE HYDRATASE) (CYTOSOLIC EPOXIDE HYDROLASE) (CEH).;1.59e-61 AE004485 61% similar to B-ketoadipate enol-lactone hydrolase [Bradyrhizobium japonicum] Putative enzymes Class 3 PA0481_at hypothetical protein PA0481 Pseudomonas PA0481 "PA0481 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595678; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-89 AE004485 "Hypothetical, unclassified, unknown" Class 4 PA0482_glcB_at 4.1.3.2 malate synthase G PA0482 Malate_synthase Pseudomonas PA0482 PA0482 /GENE=glcB /DEF=malate synthase G /FUNCTION=Carbon compound catabolism; Central intermediary metabolism 4474 // malate synthase activity // extended:inferred from electronic annotation; Malate_synthase; 0 4.1.3.2 "EC:4.1.3.2; MASZ_YEAST MALATE SYNTHASE 2, GLYOXYSOMAL (EC 4.1.3.2).;2.7e-168" Malate_synthase // Malate synthase;0 d1d8ca_ // c.1.13.1 // Malate synthase G;1.36e-284 15595679; (NC_002516) malate synthase G [Pseudomonas aeruginosa];0.0 ; 6225660; PROBABLE MALATE SYNTHASE G;0.0 "EC:4.1.3.2 // MASZ_YEAST MALATE SYNTHASE 2, GLYOXYSOMAL (EC 4.1.3.2).;1.62e-181" AE004485 75% similar to GlcB gene product of [E. coli] and AceB of [Corynebacterium glutamicum]. Glyoxylate and dicarboxylate metabolism; Pyruvate metabolism Carbon compound catabolism; Central intermediary metabolism 95111631 Class 2 PA0483_at probable acetyltransferase PA0483 Acetyltransf Pseudomonas PA0483 PA0483 /DEF=probable acetyltransferase /FUNCTION=Putative enzymes 8080 // N-acetyltransferase activity // extended:non-traceable author statement; Acetyltransf; 2.1e-17 2.3.1.60 EC:2.3.1.60; AAC1_PSEAE GENTAMICIN 3-ACETYLTRANSFERASE (EC 2.3.1.60) (GENTAMICIN ACETYLTRANSFERASE I) (AMINOGLYCOSIDE N3-ACETYLTRANSFERASE I) (AAC(3)-I).;4.6e-25 Acetyltransf // Acetyltransferase (GNAT) family;2.1e-17 d1bo4a_ // d.108.1.1 // Aminoglycoside 3-N-acetyltransferase;7.1e-22 15595680; (NC_002516) probable acetyltransferase [Pseudomonas aeruginosa];6e-80 ; 15599221; (NC_002516) probable acetyltransferase [Pseudomonas aeruginosa];3e-23 EC:2.3.1.60 // AAC1_PSEAE GENTAMICIN 3-ACETYLTRANSFERASE (EC 2.3.1.60) (GENTAMICIN ACETYLTRANSFERASE I) (AMINOGLYCOSIDE N3-ACETYLTRANSFERASE I) (AAC(3)-I).;1.21e-27 AE004486 56% similar to hypothetical protein YhfO [Bacillus subtilis] Putative enzymes Class 3 PA0484_at conserved hypothetical protein PA0484 ACT Pseudomonas PA0484 "PA0484 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16597 // amino acid binding // extended:Unknown; ACT; 0.0029 ACT // ACT domain;1.2e-13 1906368; (Y11998) hypothetical protein [Pseudomonas fluorescens];3e-56 ; 15595681; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];2e-93 AE004486 78% similar to hypothetical protein FC2.3c [Pseudomonas fluorescens] "Hypothetical, unclassified, unknown" Class 4 PA0485_at conserved hypothetical protein PA0485 DUF6 Pseudomonas PA0485 "PA0485 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 16020 // membrane // extended:Unknown; DUF6; 1.8e-06 DUF6 // Integral membrane protein DUF6;1e-11 1906367; (Y11998) hypothetical protein [Pseudomonas fluorescens];e-129 ; 15595682; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-174 numtm:9;Nin-prob:0.92898;Type: ;Span:TM from 9 to 28: Eval:0.40493/TM from 38 to 60: Eval:0.41274/TM from 72 to 94: Eval:0.68345/TM from 104 to 121: Eval:0.87301/TM from 128 to 145: Eval:0.92151/TM from 150 to 167: Eval:0.86547/TM from 174 to 196: Eval:0.90237/TM from 211 to 233: Eval:0.50281/TM from 272 to 291: Eval:0.32188 AE004486 85% similar to hypothetical protein FC2.2 [Pseudomonas fluorescens] and 64% similar to RarD protein [Escherichia coli]. "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0486_at conserved hypothetical protein PA0486 Pseudomonas PA0486 "PA0486 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 2.7.1.72 EC:2.7.1.72; STRA_STRGR STREPTOMYCIN 6-KINASE (EC 2.7.1.72) (STREPTIDINE KINASE) (STREPTOMYCIN 6-PHOSPHOTRANSFERASE) (APH(6)).;9.2e-07 DUF954 // Bacterial protein of unknown function (DUF954);8e-235 15595683; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 1906366; (Y11998) hypothetical protein [Pseudomonas fluorescens];e-123 EC:2.7.1.119 // KHYB_STRHY HYGROMYCIN-B KINASE (EC 2.7.1.119) (HYGROMYCIN B PHOSPHOTRANSFERASE) (APH(7)).;1.84e-26 AE004486 90% similar to unpublished hypothetical protein fragment FC2.1 [Pseudomonas fluorescens] and 58% similar to YihE hypothetical protein [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0487_at probable molybdenum transport regulator PA0487 TOBE Pseudomonas PA0487 PA0487 /DEF=probable molybdenum transport regulator /FUNCTION= 15098 // molybdate ion transporter activity // extended:Unknown; HTH_9; 1.3e-51 TOBE // TOBE domain;7.1e-29 /// HTH_9 // N-terminal HTH domain of molybdenum-binding protein;1.3e-51 d1b9ma1 // a.4.5.8 // N-terminal domain of molybdate-dependent transcriptional regulator ModE;1.94e-31 /// d1fr3a_ // b.40.6.1 // Molybdate/tungstate binding protein MOP;1.77e-12 "15595684; (NC_002516) probable molybdenum transport regulator [Pseudomonas aeruginosa];e-137 ; 7546533; Chain A, Regulator From Escherichia Coli;4e-36" AE004486 54% similar to molybdate uptake regulatory protein ModE [Escherichia coli] Transport of small molecules 96151473 Class 3 PA0488_at conserved hypothetical protein PA0488 Pseudomonas PA0488 "PA0488 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "15803114; (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7 EDL933];2e-23 ; 15595685; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];3e-57" AE004486 71% similar to YfiM hypothetical protein [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0489_at probable phosphoribosyl transferase PA0489 Pseudomonas PA0489 PA0489 /DEF=probable phosphoribosyl transferase /FUNCTION=Putative enzymes 2.4.2.7 EC:2.4.2.7; APT_HUMAN ADENINE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.7) (APRT).;1.1e-08 d1a3c__ // c.61.1.1 // Uracil PRTase;2.94e-09 5921548; (AJ249742) competence protein ComF [Pseudomonas stutzeri];2e-76 ; 15595686; (NC_002516) probable phosphoribosyl transferase [Pseudomonas aeruginosa];e-142 EC:2.4.2.7 // APT_HUMAN ADENINE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.7) (APRT).;1.26e-10 AE004486 51% similar to YhgH hypothetical protein [Escherichia coli] Putative enzymes Class 3 PA0490_at hypothetical protein PA0490 Pseudomonas PA0490 "PA0490 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595687; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];6e-50 numtm:2;Nin-prob:0.34409;Type: ;Span:TM from 48 to 70: Eval:0.58429/TM from 77 to 96: Eval:0.86664 AE004486 "Hypothetical, unclassified, unknown" Class 4 PA0491_at probable transcriptional regulator PA0491 LysR_substrate Pseudomonas PA0491 PA0491 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 2.3e-22 "HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;2.3e-22 /// LysR_substrate // LysR substrate binding domain;5.9e-50" "d1i6aa_ // c.94.1.1 // Hydrogen peroxide-inducible genes activator OxyR, regulatory domain;1.42e-45" 13474483; (NC_002678) transcriptional regulator [Mesorhizobium loti];9e-59 ; 15595688; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-175 AE004486 46% similar to oxidative stress transcriptional regulator OxyR [Xanthomonas campestris]. Transcriptional regulators Class 3 PA0492_at conserved hypothetical protein PA0492 LamB_YcsF Pseudomonas PA0492 "PA0492 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" LamB_YcsF // LamB/YcsF family;3.6e-155 14521195; (NC_000868) LACTAM UTILIZATION RELATED PROTEIN [Pyrococcus abyssi];2e-54 ; 15595689; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-143 AE004486 65% similar to YcsF lactam utilization protein LamB homologue [Bacillus subtilis]. "Hypothetical, unclassified, unknown" Class 4 PA0493_at probable biotin-requiring enzyme PA0493 biotin_lipoyl Pseudomonas PA0493 PA0493 /DEF=probable biotin-requiring enzyme /FUNCTION=Putative enzymes 2.1.3.1 "EC:2.1.3.1; BCCP_PROFR BIOTIN CARBOXYL CARRIER PROTEIN OF METHYLMALONYL-COA CARBOXYL- TRANSFERASE (TRANSCARBOXYLASE, 1.3S SUBUNIT).;1.2e-15" biotin_lipoyl // Biotin-requiring enzyme;1.4e-16 d1bdo__ // b.84.1.1 // Biotinyl domain of acetyl-CoA carboxylase;6.16e-17 15602957; (NC_002663) AccB [Pasteurella multocida];4e-15 ; 15595690; (NC_002516) probable biotin-requiring enzyme [Pseudomonas aeruginosa];2e-40 "EC:2.1.3.1 // BCCP_PROFR BIOTIN CARBOXYL CARRIER PROTEIN OF METHYLMALONYL-COA CARBOXYL- TRANSFERASE (TRANSCARBOXYLASE, 1.3S SUBUNIT).;1.3e-16" AE004486 64% similar to C-terminal end of Apo-Biotin Carboxyl Carrier Protein of Acetyl-Coa Carboxylase [Escherichia Coli] Putative enzymes Class 3 PA0494_at probable acyl-CoA carboxylase subunit PA0494 Biotin_carb_C Pseudomonas PA0494 PA0494 /DEF=probable acyl-CoA carboxylase subunit /FUNCTION=Putative enzymes 16874 // ligase activity // extended:Unknown; CPSase_L_chain; 2.9e-39 "Biotin_carb_C // Biotin carboxylase C-terminal domain;8.3e-52 /// CPSase_L_chain // Carbamoyl-phosphate synthase L chain, N-terminal domain;2.9e-39 /// CPSase_L_D2 // Carbamoyl-phosphate synthase L chain, ATP binding domain;2.5e-97" "d1dv1a2 // c.30.1.1 // Biotin carboxylase (BC) subunit of acetyl-CoA carboxylase;9.61e-41 /// d1dv1a1 // b.84.2.1 // Biotin carboxylase subunit of acetyl-CoA carboxylase, C-terminal domain;1.77e-37 /// d1dv1a3 // d.142.1.2 // Biotin carboxylase subunit of acetyl-CoA carboxylase;3.72e-76" 15600041; (NC_002516) biotin carboxylase [Pseudomonas aeruginosa];e-134 ; 15595691; (NC_002516) probable acyl-CoA carboxylase subunit [Pseudomonas aeruginosa];0.0 EC:6.3.2.4 // MUDD_CHLTR MURC/DDL BIFUNCTIONAL ENZYME [INCLUDES: UDP-N-ACETYLMURAMATE--ALANINE LIGASE (EC 6.3.2.8) (UDP-N-ACETYLMURAMOYL-L-ALANINE SYNTHETASE) D- ALANINE--D-ALANINE LIGASE (EC 6.3.2.4) (D-ALANYLALANINE SYNTHETASE) (D-ALA-D-ALA LIGASE)].;7.46e-96 AE004486 70% similar to ACETYL-COA CARBOXYLASE [Pseudomonas aeruginosa]; 70% similar to YqhX [Bacillus subtilis] Putative enzymes Class 3 PA0495_at hypothetical protein PA0495 DUF213 Pseudomonas PA0495 "PA0495 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" AHS1 // Allophanate hydrolase subunit 1;6.4e-09 15595692; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-171 ; 5457424; (AJ243652) urea amidolyase homologue [Pseudomonas fluorescens];4e-19 AE004486 "43% similar to C-terminal end of urea amidolyase [Pichia jadinii]; 435 similar to YbgJ, putative carboxylase, hypothetical 23.9 KD protein in phrB-nei intergenic region [Escherichia coli]" "Hypothetical, unclassified, unknown" Class 4 PA0496_at conserved hypothetical protein PA0496 DUF183 Pseudomonas PA0496 "PA0496 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" AHS2 // Allophanate hydrolase subunit 2;1.9e-67 15595693; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15614381; (NC_002570) BH1818~unknown conserved protein (divided) [Bacillus halodurans];2e-51 AE004486 50% similar to YbgK putative carboxylase [Escherichia coli]; 48% similar to urea carboxylase [Saccharomyces cerevisiae] "Hypothetical, unclassified, unknown" Class 4 PA0497_at hypothetical protein PA0497 Pseudomonas PA0497 "PA0497 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595695; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-128 ; 15595694; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004486 "Hypothetical, unclassified, unknown" Class 4 PA0498_at hypothetical protein PA0498 Pseudomonas PA0498 "PA0498 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595694; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-128 ; 15595695; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004487 "Hypothetical, unclassified, unknown" Class 4 PA0499_at probable pili assembly chaperone PA0499 pili_assembly Pseudomonas PA0499 PA0499 /DEF=probable pili assembly chaperone /FUNCTION=Motility & Attachment; Chaperones & heat shock proteins 3754 // chaperone activity // extended:inferred from electronic annotation; pili_assembly; 1.4e-07 "pili_assembly // Gram-negative pili assembly chaperone, N-terminal domain;1.4e-07" "d1qpxa1 // b.1.11.1 // Pilus chaperone PapD, N-domain;1.28e-21 /// d1l4ia2 // b.7.2.1 // SfaE;1.58e-11" 15595696; (NC_002516) probable pili assembly chaperone [Pseudomonas aeruginosa];e-136 ; 95517; filamentous hemagglutinin D - Bordetella pertussis;2e-19 AE004487 47% similar to filamentous hemagglutinin [Bordetella pertussis] Motility & Attachment; Chaperones & heat shock proteins 92371423 Class 3 PA0500_bioB_at 2.8.1.6 biotin synthase PA0500 Radical_SAM Pseudomonas PA0500 "PA0500 /GENE=bioB /DEF=biotin synthase /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 4076 // biotin synthase activity // extended:inferred from electronic annotation; 2.8.1.6; 7.03e-116 2.8.1.6 EC:2.8.1.6; BIOB_YEAST BIOTIN SYNTHASE (EC 2.8.1.6) (BIOTIN SYNTHETASE).;2.8e-102 Radical_SAM // Radical SAM superfamily;7.6e-25 15595697; (NC_002516) biotin synthase [Pseudomonas aeruginosa];0.0 ; 15641125; (NC_002505) biotin synthase [Vibrio cholerae];e-140 EC:2.8.1.6 // BIOB_YEAST BIOTIN SYNTHASE (EC 2.8.1.6) (BIOTIN SYNTHETASE).;7.03e-116 AE004487 82% similar to BIOTIN SYNTHASE [Escherichia coli] Biotin metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" 99120913; 98161782 Class 2 PA0501_bioF_at 2.3.1.47 8-amino-7-oxononanoate synthase PA0501 aminotran_1_2 Pseudomonas PA0501 "PA0501 /GENE=bioF /DEF=8-amino-7-oxononanoate synthase /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 8710 // 8-amino-7-oxononanoate synthase activity // extended:Unknown; 2.3.1.47; 5.39e-127 /// 8483 // transaminase activity // extended:Unknown; aminotran_1_2; 5e-34 2.6.1.9 EC:2.6.1.9; HIS8_ZYMMO HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (EC 2.6.1.9) (IMIDAZOLE ACETOL- PHOSPHATE TRANSAMINASE).;4e-14 ; EC:2.3.1.50; LCB2_HUMAN SERINE PALMITOYLTRANSFERASE 2 (EC 2.3.1.50) (LONG CHAIN BASE BIOSYNTHESIS PROTEIN 2) (LCB 2) (SERINE-PALMITOYL-COA TRANSFERASE 2) (SPT 2).;2.2e-126 ; EC:4.4.1.11; MEGL_PSEPU METHIONINE GAMMA-LYASE (EC 4.4.1.11) (L-METHIONINASE).;1.3e-54 ; EC:2.3.1.47; BIOF_SERMA 8-AMINO-7-OXONONANOATE SYNTHASE (EC 2.3.1.47) (AONS) (8-AMINO-7- KETOPELARGONATE SYNTHASE) (7-KETO-8-AMINO-PELARGONIC ACID SYNTHETASE) (7-KAP SYNTHETASE) (L-ALANINE--PIMELYL COA LIGASE).;7.4e-115 aminotran_1_2 // Aminotransferase class I and II;5e-34 "d1bs0a_ // c.67.1.4 // PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS);4.27e-126" 15837958; (NC_002488) 8-amino-7-oxononanoate synthase [Xylella fastidiosa 9a5c];4e-90 ; 15595698; (NC_002516) 8-amino-7-oxononanoate synthase [Pseudomonas aeruginosa];0.0 EC:4.1.2.5 // GLY1_YEAST LOW-SPECIFICITY THREONINE ALDOLASE (EC 4.1.2.5).;2.06e-50 /// EC:2.3.1.47 // BIOF_SERMA 8-AMINO-7-OXONONANOATE SYNTHASE (EC 2.3.1.47) (AONS) (8-AMINO-7- KETOPELARGONATE SYNTHASE) (7-KETO-8-AMINO-PELARGONIC ACID SYNTHETASE) (7-KAP SYNTHETASE) (L-ALANINE--PIMELYL COA LIGASE).;5.39e-127 /// EC:4.4.1.8 // METC_YEAST PUTATIVE CYSTATHIONINE BETA-LYASE (EC 4.4.1.8) (CBL) (BETA- CYSTATHIONASE) (CYSTEINE LYASE).;2.94e-14 /// EC:2.6.1.9 // HIS8_ZYMMO HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (EC 2.6.1.9) (IMIDAZOLE ACETOL- PHOSPHATE TRANSAMINASE).;9.29e-18 AE004487 62% similar to 8-AMINO-7-OXONONANOATE SYNTHASE [Escherichia coli] Biotin metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" 89066784; 99033055 Class 2 PA0502_at probable biotin biosynthesis protein bioH PA0502 Pseudomonas PA0502 "PA0502 /DEF=probable biotin biosynthesis protein bioH /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 3.1.1.10 EC:3.1.1.10; TPES_PSEPU TROPINESTERASE (EC 3.1.1.10) (ATROPINESTERASE) (ATROPINE ACYLHYDROLASE).;9.5e-23 ; EC:3.1.1.24; ELH2_ACICA 3-OXOADIPATE ENOL-LACTONASE II (EC 3.1.1.24) (ENOL-LACTONE HYDROLASE II) (BETA-KETOADIPATE ENOL-LACTONE HYDROLASE II).;8.4e-26 d1a8ua_ // c.69.1.12 // Chloroperoxidase T;2.32e-25 15595699; (NC_002516) probable biotin biosynthesis protein bioH [Pseudomonas aeruginosa];e-138 ; 16131288; (NC_000913) biotin biosynthesis; reaction prior to pimeloyl CoA [Escherichia coli K12];1e-19 EC:3.1.1.10 // TPES_PSEPU TROPINESTERASE (EC 3.1.1.10) (ATROPINESTERASE) (ATROPINE ACYLHYDROLASE).;2.29e-26 /// EC:1.13.12.5 // LUCI_RENRE RENILLA-LUCIFERIN 2-MONOOXYGENASE (EC 1.13.12.5) (RENILLA-TYPE LUCIFERASE).;3.38e-16 /// EC:3.3.2.3 // HYES_HUMAN SOLUBLE EPOXIDE HYDROLASE (SEH) (EC 3.3.2.3) (EPOXIDE HYDRATASE) (CYTOSOLIC EPOXIDE HYDROLASE) (CEH).;2.35e-25 /// EC:2.3.1.31 // MET2_YEAST HOMOSERINE O-ACETYLTRANSFERASE (EC 2.3.1.31) (HOMOSERINE O-TRANS- ACETYLASE).;1.31e-17 /// EC:3.8.1.5 // YM96_MYCTU PUTATIVE HALOALKANE DEHALOGENASE (EC 3.8.1.5).;2.81e-21 /// EC:1.11.1.10 // PRXC_SYNY3 PUTATIVE NON-HEME CHLOROPEROXIDASE (EC 1.11.1.10) (CHLORIDE PEROXIDASE).;7e-29 AE004487 45% similar to BIOH PROTEIN [Escherichia coli] Biotin metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" 90016899 Class 3 PA0503_at probable biotin synthesis protein BioC PA0503 Ubie_methyltran Pseudomonas PA0503 "PA0503 /DEF=probable biotin synthesis protein BioC /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 8168 // methyltransferase activity // extended:inferred from electronic annotation; Ubie_methyltran; 4.9e-06 2.1.1.51 EC:2.1.1.51; RRMA_ECOLI RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE A (EC 2.1.1.51) (RRNA (GUANINE-N1-)-METHYLTRANSFERASE) (23S RRNA M1G745 METHYLTRANSFERASE).;1.3e-34 ; EC:2.1.1.17; PMTA_RHOSH PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE (EC 2.1.1.17).;1.2e-31 Ubie_methyltran // ubiE/COQ5 methyltransferase family;4.9e-06 d1jsxa_ // c.66.1.20 // Glucose-inhibited division protein B (GidB);5.22e-14 543890; BIOTIN SYNTHESIS PROTEIN BIOC;1e-50 ; 15595700; (NC_002516) probable biotin synthesis protein BioC [Pseudomonas aeruginosa];e-157 "EC:2.1.1.64 // UBIG_SALTY 3-DEMETHYLUBIQUINONE-9 3-METHYLTRANSFERASE (EC 2.1.1.64) (3,4-DIHYDROXY-5-HEXAPRENYLBENZOATE METHYLTRANSFERASE) (DHHB METHYLTRANSFERASE) (FRAGMENT).;1.03e-30" AE004487 69% similar to BIOTIN SYNTHESIS PROTEIN BIOC [Serratia marcescens] Biotin metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" 89066784 Class 3 PA0504_bioD_at 6.3.3.3 dethiobiotin synthase PA0504 CbiA Pseudomonas PA0504 "PA0504 /GENE=bioD /DEF=dethiobiotin synthase /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" "42242 // cobyrinic acid a,c-diamide synthase activity // extended:Unknown; CbiA; 1.1e-25" 6.3.3.3 EC:6.3.3.3; BIOD_YEAST DETHIOBIOTIN SYNTHETASE (EC 6.3.3.3) (DETHIOBIOTIN SYNTHASE) (DTB SYNTHETASE) (DTBS).;2.6e-48 "CbiA // Cobyrinic acid a,c-diamide synthase;1.1e-25" d1byi__ // c.37.1.10 // Dethiobiotin synthetase;5.16e-66 15595701; (NC_002516) dethiobiotin synthase [Pseudomonas aeruginosa];e-124 ; 3913159; Dethiobiotin synthetase (Dethiobiotin synthase) (DTB synthetase) (DTBS);3e-53 EC:6.3.3.3 // BIOD_YEAST DETHIOBIOTIN SYNTHETASE (EC 6.3.3.3) (DETHIOBIOTIN SYNTHASE) (DTB SYNTHETASE) (DTBS).;6.16e-62 AE004487 62% similar to DETHIOBIOTIN SYNTHETASE [Serratia marcescens] Biotin metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" 71039997; 94118326; 94363241 Class 2 PA0505_at hypothetical protein PA0505 Pseudomonas PA0505 "PA0505 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595702; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];4e-34 AE004487 "Hypothetical, unclassified, unknown" Class 4 PA0506_at probable acyl-CoA dehydrogenase PA0506 Acyl-CoA_dh Pseudomonas PA0506 PA0506 /DEF=probable acyl-CoA dehydrogenase /FUNCTION=Putative enzymes 3995 // acyl-CoA dehydrogenase activity // extended:inferred from electronic annotation; Acyl-CoA_dh_M; 6.8e-12 1.3.99.10 "EC:1.3.99.10; IVD_HUMAN ISOVALERYL-COA DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.3.99.10) (IVD).;4.5e-86" "Acyl-CoA_dh_M // Acyl-CoA dehydrogenase, middle domain;6.8e-12 /// Acyl-CoA_dh // Acyl-CoA dehydrogenase, C-terminal domain;1.2e-47" d1ivha2 // e.6.1.1 // Isovaleryl-coa dehydrogenase;4.31e-61 /// d1egda1 // a.29.3.1 // Medium chain acyl-CoA dehydrogenase;2.25e-37 15595703; (NC_002516) probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa];0.0 ; 15595704; (NC_002516) probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa];0.0 "EC:1.3.99.2 // ACDS_HUMAN ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC, MITOCHONDRIAL PRECURSOR (EC 1.3.99.2) (SCAD) (BUTYRYL-COA DEHYDROGENASE).;1.16e-105" AE004487 50% similar to FadE5 [Mycobacterium tuberculosis] C-terminal end is 77% similar to acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Putative enzymes Class 3 PA0507_at probable acyl-CoA dehydrogenase PA0507 Acyl-CoA_dh Pseudomonas PA0507 PA0507 /DEF=probable acyl-CoA dehydrogenase /FUNCTION=Putative enzymes 3995 // acyl-CoA dehydrogenase activity // extended:inferred from electronic annotation; Acyl-CoA_dh_M; 3.6e-10 1.3.99.13 "EC:1.3.99.13; ACDL_HUMAN ACYL-COA DEHYDROGENASE, LONG-CHAIN SPECIFIC, MITOCHONDRIAL PRECURSOR (EC 1.3.99.13) (LCAD).;4.6e-86 ; EC:1.3.99.10; IVD_HUMAN ISOVALERYL-COA DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.3.99.10) (IVD).;1.2e-86" "Acyl-CoA_dh // Acyl-CoA dehydrogenase, C-terminal domain;1.8e-53 /// Acyl-CoA_dh_M // Acyl-CoA dehydrogenase, middle domain;3.6e-10" d1buca2 // e.6.1.1 // Butyryl-CoA dehydrogenase;1.36e-60 /// d1jqia1 // a.29.3.1 // Butyryl-CoA dehydrogenase;5.31e-42 15595703; (NC_002516) probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa];0.0 ; 15595704; (NC_002516) probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa];0.0 "EC:1.3.99.2 // ACDS_HUMAN ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC, MITOCHONDRIAL PRECURSOR (EC 1.3.99.2) (SCAD) (BUTYRYL-COA DEHYDROGENASE).;1.23e-110" AE004487 49% similar to FadE5 [Mycobacterium tuberculosis] C-terminal end is 71% similar to acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Putative enzymes Class 3 PA0508_at probable acyl-CoA dehydrogenase PA0508 Acyl-CoA_dh_M Pseudomonas PA0508 PA0508 /DEF=probable acyl-CoA dehydrogenase /FUNCTION=Putative enzymes 3995 // acyl-CoA dehydrogenase activity // extended:inferred from electronic annotation; Acyl-CoA_dh_M; 5.4e-12 1.3.99.3 "EC:1.3.99.3; ACDM_HUMAN ACYL-COA DEHYDROGENASE, MEDIUM-CHAIN SPECIFIC, MITOCHONDRIAL PRECURSOR (EC 1.3.99.3) (MCAD).;5.3e-76" "Acyl-CoA_dh // Acyl-CoA dehydrogenase, C-terminal domain;4.2e-52 /// Acyl-CoA_dh_M // Acyl-CoA dehydrogenase, middle domain;5.4e-12" d1buca2 // e.6.1.1 // Butyryl-CoA dehydrogenase;2.27e-57 /// d1egda1 // a.29.3.1 // Medium chain acyl-CoA dehydrogenase;7.44e-38 15599394; (NC_002516) probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa];0.0 ; 15595705; (NC_002516) probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa];0.0 "EC:1.3.99.2 // ACDS_HUMAN ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC, MITOCHONDRIAL PRECURSOR (EC 1.3.99.2) (SCAD) (BUTYRYL-COA DEHYDROGENASE).;3.48e-100" AE004488 48% similar to FadE5 [Mycobacterium tuberculosis] C-terminal end is 64% similar to acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Putative enzymes Class 3 PA0509_nirN_at probable c-type cytochrome PA0509 D1_heme Pseudomonas PA0509 "PA0509 /GENE=nirN /DEF=probable c-type cytochrome /FUNCTION=Energy metabolism; Biosynthesis of cofactors, prosthetic groups and carriers" 5489 // electron transporter activity // extended:Unknown; cytochrome_c; 8.6e-07 1.9.3.2 EC:1.9.3.2; NIRS_PSEST NITRITE REDUCTASE PRECURSOR (EC 1.9.3.2) (CYTOCHROME CD1) (CYTOCHROME OXIDASE).;4e-169 D1_heme // Cytochrome D1 heme domain;1.9e-215 /// cytochrome_c // Cytochrome c;8.6e-07 "d1crza1 // b.68.4.1 // TolB, C-terminal domain;2.17e-09 /// d1erja_ // b.69.4.1 // Tup1, C-therminal domain;3.56e-11 /// d1jmxb_ // b.69.2.2 // Quinohemoprotein amine dehydrogenase B chain;2.68e-15 /// d1qksa2 // b.70.2.1 // C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase;7.92e-130 /// d1hj5a1 // a.3.1.2 // N-terminal (heme c) domain of cytochrome cd1-nitrite reductase;6.05e-18" 15595706; (NC_002516) probable c-type cytochrome [Pseudomonas aeruginosa];0.0 ; 1783283; (D84475) NirN [Pseudomonas aeruginosa];0.0 EC:1.9.3.2 // NIRS_PSEST NITRITE REDUCTASE PRECURSOR (EC 1.9.3.2) (CYTOCHROME CD1) (CYTOCHROME OXIDASE).;3.44e-160 AE004488 100% identical to NirN [Pseudomonas aeruginosa] Denitrification "Energy metabolism; Biosynthesis of cofactors, prosthetic groups and carriers" Class 3 PA0510_at probable uroporphyrin-III c-methyltransferase PA0510 TP_methylase Pseudomonas PA0510 "PA0510 /DEF=probable uroporphyrin-III c-methyltransferase /FUNCTION=Energy metabolism; Biosynthesis of cofactors, prosthetic groups and carriers" 8168 // methyltransferase activity // extended:inferred from electronic annotation; TP_methylase; 3.9e-84 5.4.1.2 EC:5.4.1.2; COBJ_ARCFU COBALAMIN BIOSYNTHESIS PROTEIN COBJH [INCLUDES: PRECORRIN-3B C17- METHYLTRANSFERASE (EC 2.1.1.131) (PRECORRIN-3 METHYLTRANSFERASE) (PRECORRIN-3 METHYLASE); PRECORRIN-8X METHYLMUTASE (EC 5.4.1.2) (PRECORRIN ISOMERASE)].;4.4e-80 ; EC:2.1.1.107; SUMT_YEAST PROBABLE UROPORPHYRIN-III C-METHYLTRANSFERASE (EC 2.1.1.107) (UROGEN III METHYLASE) (SUMT) (UROPORPHYRINOGEN III METHYLASE) (UROM).;5.3e-99 ; EC:2.1.1.130; COBI_PSEDE PRECORRIN-2 C20-METHYLTRANSFERASE (EC 2.1.1.130) (S-ADENOSYL-L- METHIONINE--PRECORRIN-2 METHYLTRANSFERASE) (SP2MT).;1.3e-71 TP_methylase // Tetrapyrrole (Corrin/Porphyrin) Methylases;3.9e-84 d1cbf__ // c.90.1.1 // Cobalt precorrin-4 methyltransferase CbiF;1.76e-75 1684729; (Z73914) Uroporphyrinogen-III C-methyltransferase [Pseudomonas stutzeri];8e-97 ; 15595707; (NC_002516) probable uroporphyrin-III c-methyltransferase [Pseudomonas aeruginosa];e-158 EC:2.1.1.130 // COBI_PSEDE PRECORRIN-2 C20-METHYLTRANSFERASE (EC 2.1.1.130) (S-ADENOSYL-L- METHIONINE--PRECORRIN-2 METHYLTRANSFERASE) (SP2MT).;3.82e-72 AE004488 100% identical to methyltransferase NirE [Pseudomonas aeruginosa]; 75% similar to Uroporphyrinogen-III C-methyltransferase [Pseudomonas stutzeri] Denitrification; Biosynthesis of heme d1 "Energy metabolism; Biosynthesis of cofactors, prosthetic groups and carriers" Class 3 PA0511_nirJ_at heme d1 biosynthesis protein NirJ PA0511 Radical_SAM Pseudomonas PA0511 "PA0511 /GENE=nirJ /DEF=heme d1 biosynthesis protein NirJ /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers; Energy metabolism" Radical_SAM // Radical SAM superfamily;2.9e-34 1684728; (Z73914) ORF393 protein [Pseudomonas stutzeri];e-153 ; 15595708; (NC_002516) heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa];0.0 EC:1.97.1.4 // PFLE_ECOLI PUTATIVE PYRUVATE FORMATE-LYASE 3 ACTIVATING ENZYME (EC 1.97.1.4).;5.62e-08 /// EC:2.8.1.6 // BIOB_YEAST BIOTIN SYNTHASE (EC 2.8.1.6) (BIOTIN SYNTHETASE).;3.06e-23 AE004488 Denitrification; Biosynthesis of heme d1 "Biosynthesis of cofactors, prosthetic groups and carriers; Energy metabolism" Class 1 PA0512_at conserved hypothetical protein PA0512 Pseudomonas PA0512 "PA0512 /DEF=conserved hypothetical protein /FUNCTION=Energy metabolism; Hypothetical, unclassified, unknown; Biosynthesis of cofactors, prosthetic groups and carriers" 2498640; NIRH PROTEIN;2e-62 ; 15595709; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];1e-95 AE004488 79% similar to NirH protein [Pseudomonas stutzeri]. Denitrification; Biosynthesis of heme d1 "Energy metabolism; Hypothetical, unclassified, unknown; Biosynthesis of cofactors, prosthetic groups and carriers" 96028114 Class 4 PA0513_at probable transcriptional regulator PA0513 Pseudomonas PA0513 "PA0513 /DEF=probable transcriptional regulator /FUNCTION=Energy metabolism; Transcriptional regulators; Biosynthesis of cofactors, prosthetic groups and carriers" 2498639; NIRG PROTEIN PRECURSOR;2e-51 ; 15595710; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];6e-82 AE004488 77% similar to NirG protein [Pseudomonas stutzeri]. Denitrification; Biosynthesis of heme d1 "Energy metabolism; Transcriptional regulators; Biosynthesis of cofactors, prosthetic groups and carriers" Class 3 PA0514_nirL_at heme d1 biosynthesis protein NirL PA0514 Pseudomonas PA0514 "PA0514 /GENE=nirL /DEF=heme d1 biosynthesis protein NirL /FUNCTION=Energy metabolism; Hypothetical, unclassified, unknown; Biosynthesis of cofactors, prosthetic groups and carriers" 15595711; (NC_002516) heme d1 biosynthesis protein NirL [Pseudomonas aeruginosa];e-100 ; 2498642; NIRL PROTEIN;7e-53 AE004488 77% similar to NirL protein [Pseudomonas stutzeri]. Denitrification; Biosynthesis of heme d1 "Energy metabolism; Hypothetical, unclassified, unknown; Biosynthesis of cofactors, prosthetic groups and carriers" Class 1 PA0515_at probable transcriptional regulator PA0515 ASNC_trans_reg Pseudomonas PA0515 "PA0515 /DEF=probable transcriptional regulator /FUNCTION=Energy metabolism; Transcriptional regulators; Biosynthesis of cofactors, prosthetic groups and carriers" 3700 // transcription factor activity // extended:inferred from direct assay; ASNC_trans_reg; 0.0045 ASNC_trans_reg // AsnC family;0.0045 15595712; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];4e-81 ; 2498636; NIRD PROTEIN PRECURSOR;1e-53 AE004488 78% similar to NirD protein [Pseudomonas stutzeri]. Denitrification; Biosynthesis of heme d1 "Energy metabolism; Transcriptional regulators; Biosynthesis of cofactors, prosthetic groups and carriers" Class 3 PA0516_nirF_at 1.9.3.2 heme d1 biosynthesis protein NirF PA0516 D1_heme Pseudomonas PA0516 "PA0516 /GENE=nirF /DEF=heme d1 biosynthesis protein NirF /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers; Energy metabolism" 5489 // electron transporter activity // extended:Unknown; D1_heme; 4.8e-217 1.9.3.2 EC:1.9.3.2; NIRS_PSEST NITRITE REDUCTASE PRECURSOR (EC 1.9.3.2) (CYTOCHROME CD1) (CYTOCHROME OXIDASE).;5.2e-133 D1_heme // Cytochrome D1 heme domain;4.8e-217 "d1gxra_ // b.69.4.1 // Groucho/tle1, C-therminal domain;3.71e-09 /// d1jjub_ // b.69.2.2 // Quinohemoprotein amine dehydrogenase B chain;1.99e-24 /// d1nira2 // b.70.2.1 // C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase;6e-109" 15595713; (NC_002516) heme d1 biosynthesis protein NirF [Pseudomonas aeruginosa];0.0 ; 2498637; NIRF PROTEIN;e-169 EC:1.9.3.2 // NIRS_PSEST NITRITE REDUCTASE PRECURSOR (EC 1.9.3.2) (CYTOCHROME CD1) (CYTOCHROME OXIDASE).;3.52e-113 AE004488 100% identical to NirF PROTEIN [Pseudomonas aeruginosa] Denitrification; Biosynthesis of heme d1 "Biosynthesis of cofactors, prosthetic groups and carriers; Energy metabolism" 96144254 Class 1 PA0517_nirC_at probable c-type cytochrome precursor PA0517 cytochrome_c Pseudomonas PA0517 "PA0517 /GENE=nirC /DEF=probable c-type cytochrome precursor /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers; Energy metabolism" d1c75a_ // a.3.1.1 // Cytochrome c6 (synonym: cytochrome c553);8.13e-13 115257; C-TYPE CYTOCHROME C55X PRECURSOR;8e-29 ; 15595714; (NC_002516) probable c-type cytochrome precursor [Pseudomonas aeruginosa];1e-66 AE004488 100% identical to C-TYPE CYTOCHROME C55X PRECURSOR NirC [Pseudomonas aeruginosa]; 69% similar to cytochrome c (c55X) NirC [Paracoccus denitrificans] Denitrification; Biosynthesis of heme d1 "Biosynthesis of cofactors, prosthetic groups and carriers; Energy metabolism" 95266782 Class 3 PA0518_nirM_at cytochrome c-551 precursor PA0518 cytochrome_c Pseudomonas PA0518 "PA0518 /GENE=nirM /DEF=cytochrome c-551 precursor /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers; Energy metabolism" 5489 // electron transporter activity // extended:Unknown; cytochrome_c; 3.9e-16 cytochrome_c // Cytochrome c;3.9e-16 d451c__ // a.3.1.1 // Cytochrome c551;2.99e-28 443414; cytochrome c551 [Pseudomonas aeruginosa];6e-43 ; 15595715; (NC_002516) cytochrome c-551 precursor [Pseudomonas aeruginosa];8e-56 EC:1.7.99.7 // NORC_RHOSH NITRIC-OXIDE REDUCTASE SUBUNIT C (EC 1.7.99.7) (CYTOCHROME BC SUBUNIT) (NOR).;1.17e-16 AE004488 100% identical to CYTOCHROME C-551 PRECURSOR [Pseudomonas aeruginosa] Denitrification; Biosynthesis of heme d1 "Biosynthesis of cofactors, prosthetic groups and carriers; Energy metabolism" 90092552; 97136626 Class 1 PA0519_nirS_at 1.9.3.2 nitrite reductase precursor PA0519 D1_heme Pseudomonas PA0519 PA0519 /GENE=nirS /DEF=nitrite reductase precursor /FUNCTION=Energy metabolism 5489 // electron transporter activity // extended:Unknown; D1_heme; 1.6e-268 1.9.3.2 EC:1.9.3.2; NIRS_PSEST NITRITE REDUCTASE PRECURSOR (EC 1.9.3.2) (CYTOCHROME CD1) (CYTOCHROME OXIDASE).;4e-226 D1_heme // Cytochrome D1 heme domain;1.6e-268 d1nira1 // a.3.1.2 // N-terminal (heme c) domain of cytochrome cd1-nitrite reductase;3e-29 /// d1nira2 // b.70.2.1 // C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase;9.77e-197 "15595716; (NC_002516) nitrite reductase precursor [Pseudomonas aeruginosa];0.0 ; 2781089; Chain B, Oxydized Nitrite Reductase From Pseudomonas Aeruginosa;0.0" EC:1.9.3.2 // NIRS_PSEST NITRITE REDUCTASE PRECURSOR (EC 1.9.3.2) (CYTOCHROME CD1) (CYTOCHROME OXIDASE).;1.25e-226 AE004488 100% identical to NITRITE REDUCTASE PRECURSOR [Pseudomonas aeruginosa] Denitrification Energy metabolism 90092552; 89378234 Class 1 PA0520_nirQ_at regulatory protein NirQ PA0520 Pseudomonas PA0520 PA0520 /GENE=nirQ /DEF=regulatory protein NirQ /FUNCTION=Central intermediary metabolism; Energy metabolism d1iqpa2 // c.37.1.13 // Replication factor C;3.48e-14 11344609; (AF197466) ATP/GTP binding protein; NirQ [Pseudomonas fluorescens];e-118 ; 15595717; (NC_002516) regulatory protein NirQ [Pseudomonas aeruginosa];e-150 AE004489 100% identical to DENITRIFICATION REGULATORY PROTEIN NirQ [Pseudomonas aeruginosa] Denitrification Central intermediary metabolism; Energy metabolism 95394152; 94362287 Class 1 PA0521_at probable cytochrome c oxidase subunit PA0521 COX3 Pseudomonas PA0521 PA0521 /DEF=probable cytochrome c oxidase subunit /FUNCTION=Energy metabolism 4129 // cytochrome c oxidase activity // extended:Unknown; COX3; 1.3e-07 COX3 // Cytochrome c oxidase subunit III;1.3e-07 1684726; (Z73914) ORF175 protein [Pseudomonas stutzeri];4e-60 ; 15595718; (NC_002516) probable cytochrome c oxidase subunit [Pseudomonas aeruginosa];e-101 numtm:5;Nin-prob:0.99113;Type: ;Span:TM from 2 to 21: Eval:0.97651/TM from 41 to 63: Eval:0.44851/TM from 72 to 94: Eval:0.30677/TM from 109 to 131: Eval:0.89823/TM from 152 to 174: Eval:0.49672 AE004489 100% identical to nirQ downstream ORF 2 [Pseudomonas aeruginosa]; 52% similar to NorE protein [Paracoccus denitrificans] Energy metabolism Class 3 PA0522_r_at hypothetical protein PA0522 Pseudomonas PA0522 "PA0522 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3183480; Hypothetical 8.5 kDa protein in NIRQ 3'region (ORF82);2e-15 ; 15595719; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-43 numtm:3;Nin-prob:0.95134;Type: ;Span:TM from 5 to 24: Eval:0.85758/TM from 29 to 46: Eval:0.57885/TM from 58 to 80: Eval:0.89047 AE004489 100% identical to ORF 3 (downstream of nirQ) [Pseudomonas aeruginosa] "Hypothetical, unclassified, unknown" 94362287 Class 4 PA0523_norC_at 1.7.99.7 nitric-oxide reductase subunit C PA0523 cytochrome_c Pseudomonas PA0523 PA0523 /GENE=norC /DEF=nitric-oxide reductase subunit C /FUNCTION=Energy metabolism 16967 // cytochrome bc nitric oxide reductase activity // extended:Unknown; 1.7.99.7; 3.1e-51 1.7.99.7 EC:1.7.99.7; NORC_RHOSH NITRIC-OXIDE REDUCTASE SUBUNIT C (EC 1.7.99.7) (CYTOCHROME BC SUBUNIT) (NOR).;8.2e-49 d1cch__ // a.3.1.1 // Cytochrome c551;2.85e-18 11344613; (AF197467) nitric oxide reductase cytochrome c subunit; NorC [Pseudomonas fluorescens];5e-69 ; 15595720; (NC_002516) nitric-oxide reductase subunit C [Pseudomonas aeruginosa];8e-84 numtm:1;Nin-prob:0.93471;Type:SIGNAL;Span:TM from 13 to 30: Eval:0.91298 EC:1.7.99.7 // NORC_RHOSH NITRIC-OXIDE REDUCTASE SUBUNIT C (EC 1.7.99.7) (CYTOCHROME BC SUBUNIT) (NOR).;3.1e-51 AE004489 100% identical to cytochrome c subunit of nitric oxide reductase [Pseudomonas aeruginosa] Denitrification Energy metabolism 95226457; 91115833 Class 1 PA0524_norB_at 1.7.99.7 nitric-oxide reductase subunit B PA0524 COX1 Pseudomonas PA0524 PA0524 /GENE=norB /DEF=nitric-oxide reductase subunit B /FUNCTION=Energy metabolism 4129 // cytochrome c oxidase activity // extended:Unknown; COX1; 0.0011 COX1 // Cytochrome C and Quinol oxidase polypeptide I;0.0011 1352512; Nitric-oxide reductase subunit B (Nitric oxide reductase cytochrome b subunit) (NOR large subunit);0.0 ; 15595721; (NC_002516) nitric-oxide reductase subunit B [Pseudomonas aeruginosa];0.0 numtm:12;Nin-prob:0.9984;Type: ;Span:TM from 21 to 43: Eval:0.90284/TM from 58 to 80: Eval:0.99243/TM from 93 to 115: Eval:0.94496/TM from 141 to 163: Eval:0.63987/TM from 168 to 190: Eval:0.95890/TM from 205 to 227: Eval:0.98763/TM from 240 to 262: Eval:0.89364/TM from 272 to 294: Eval:0.66311/TM from 307 to 329: Eval:0.84118/TM from 349 to 368: Eval:0.89517/TM from 389 to 411: Eval:0.80605/TM from 437 to 459: Eval:0.53525 AE004489 100% identical to cytochrome b subunit of nitric oxide reductase [Pseudomonas aeruginosa] Denitrification Energy metabolism 91115833; 95226457 Class 1 PA0525_at probable dinitrification protein NorD PA0525 Pseudomonas PA0525 PA0525 /DEF=probable dinitrification protein NorD /FUNCTION=Energy metabolism 15595722; (NC_002516) probable dinitrification protein NorD [Pseudomonas aeruginosa];0.0 ; 15890597; (NC_003063) AGR_L_961p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];1e-95 AE004489 100% identical to hypothetical protein downstream of norCB [Pseudomonas aeruginosa] and 50% similar to NorD [Rhodobacter sphaeroides]. Denitrification Energy metabolism 95226457; 97175026; 97175026 Class 3 PA0526_at hypothetical protein PA0526 Pseudomonas PA0526 "PA0526 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 11071580; (AJ298925) DnrP protein [Pseudomonas stutzeri];5e-14 ; 15595723; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];8e-35 numtm:1;Nin-prob:0.99814;Type: ;Span:TM from 41 to 60: Eval:0.38964 AE004489 100% identical to hypothetical protein downstream of norCB [Pseudomonas aeruginosa] Denitrification "Hypothetical, unclassified, unknown" 95394152 Class 4 PA0527_dnr_at transcriptional regulator Dnr PA0527 cNMP_binding Pseudomonas PA0527 PA0527 /GENE=dnr /DEF=transcriptional regulator Dnr /FUNCTION=Transcriptional regulators cNMP_binding // Cyclic nucleotide-binding domain;6e-24 "d1hw5a2 // b.82.3.2 // Catabolite gene activator protein, N-terminal domain;2.1e-30" 4585795; (AJ131715) DnrD protein [Pseudomonas stutzeri];2e-82 ; 15595724; (NC_002516) transcriptional regulator Dnr [Pseudomonas aeruginosa];e-127 AE004489 100% identical to Dnr protein [Pseudomonas aeruginosa]. Denitrification Transcriptional regulators Class 1 PA0528_at probable transcriptional regulator PA0528 LysR_substrate Pseudomonas PA0528 PA0528 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_1; 3.5e-28 "LysR_substrate // LysR substrate binding domain;3.1e-40 /// HTH_1 // Bacterial regulatory helix-turn-helix protein, lysR family;3.5e-28" "d1i6aa_ // c.94.1.1 // Hydrogen peroxide-inducible genes activator OxyR, regulatory domain;2.09e-39" 15800067; (NC_002655) cyn operon positive regulator [Escherichia coli O157:H7 EDL933];2e-33 ; 15595725; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-163 AE004489 49% similar to positive regulator CynR [Escherichia coli]. Transcriptional regulators Class 3 PA0529_at conserved hypothetical protein PA0529 3-alpha Pseudomonas PA0529 "PA0529 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" MOSC // MOSC domain;1.1e-51 /// 3-alpha // 3-alpha domain;1.3e-19 15595726; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-143 ; 15597425; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];7e-44 AE004489 60% similar to hypothetical protein YiiM [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0530_at probable class III pyridoxal phosphate-dependent aminotransferase PA0530 aminotran_3 Pseudomonas PA0530 PA0530 /DEF=probable class III pyridoxal phosphate-dependent aminotransferase /FUNCTION=Putative enzymes 8483 // transaminase activity // extended:Unknown; aminotran_3; 1.9e-93 4.1.1.64 "EC:4.1.1.64; DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;4.5e-94 ; EC:5.4.3.8; GSA_XANCH GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE (EC 5.4.3.8) (GSA) (GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE) (GSA-AT).;9.2e-96 ; EC:2.6.1.11; ARGD_YEAST ACETYLORNITHINE AMINOTRANSFERASE, MITOCHONDRIAL PRECURSOR (EC 2.6.1.11) (ACOAT).;2.1e-99" aminotran_3 // Aminotransferase class-III;1.9e-93 d2dkb__ // c.67.1.4 // Dialkylglycine decarboxylase;1.42e-100 15644529; (NC_000853) acetylornithine aminotransferase [Thermotoga maritima];3e-70 ; 15595727; (NC_002516) probable class III pyridoxal phosphate-dependent aminotransferase [Pseudomonas aeruginosa];0.0 "EC:4.1.99.1 // TNAA_PROVU TRYPTOPHANASE (EC 4.1.99.1) (L-TRYPTOPHAN INDOLE-LYASE) (TNASE).;1.88e-25 /// EC:2.6.1.11 // ARGD_YEAST ACETYLORNITHINE AMINOTRANSFERASE, MITOCHONDRIAL PRECURSOR (EC 2.6.1.11) (ACOAT).;7.25e-107 /// EC:4.1.1.64 // DGDA_BURCE 2,2-DIALKYLGLYCINE DECARBOXYLASE (EC 4.1.1.64) (DGD).;5.9e-101" AE004489 56% similar to succinylornithine aminotransferase AruC [Pseudomonas aeruginosa]. Putative enzymes Class 3 PA0531_at probable glutamine amidotransferase PA0531 GATase Pseudomonas PA0531 PA0531 /DEF=probable glutamine amidotransferase /FUNCTION=Putative enzymes 3824 // catalytic activity // extended:Unknown; GATase; 5.9e-06 GATase // Glutamine amidotransferase class-I;5.9e-06 "d1i1qb_ // c.23.16.1 // Anthranilate synthase GAT subunit, TrpG;5.48e-27" 16332036; (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803];5e-49 ; 15595728; (NC_002516) probable glutamine amidotransferase [Pseudomonas aeruginosa];e-140 EC:3.4.19.9 // GGH_HUMAN GAMMA-GLUTAMYL HYDROLASE PRECURSOR (EC 3.4.19.9) (GAMMA-GLU-X CARBOXYPEPTIDASE) (CONJUGASE) (GH).;3.52e-12 /// EC:4.1.1.48 // TRPG_YEAST ANTHRANILATE SYNTHASE COMPONENT II (EC 4.1.3.27) [INCLUDES: GLUTAMINE AMIDOTRANSFERASE INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (EC 4.1.1.48) (PRAI)].;4.93e-21 /// EC:5.3.1.24 // TRPG_SCHPO ANTHRANILATE SYNTHASE COMPONENT II (EC 4.1.3.27) [INCLUDES: GLUTAMINE AMIDOTRANSFERASE INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (EC 4.1.1.48) (IGPS) N-(5-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (EC 5.3.1.24) (PRAI)].;1.59e-28 /// EC:2.4.2.18 // TRPG_THEMA ANTHRANILATE SYNTHASE COMPONENT II (EC 4.1.3.27) [INCLUDES: GLUTAMINE AMIDOTRANSFERASE ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.18)].;1.74e-27 /// EC:4.1.3.27 // YB71_HAEIN PUTATIVE ANTHRANILATE SYNTHASE COMPONENT II (EC 4.1.3.27) (GLUTAMINE AMIDO-TRANSFERASE).;2.79e-24 AE004489 58% similar to hypothetical protein [Synechocystis sp.]. Putative enzymes Class 3 PA0532_at hypothetical protein PA0532 Pseudomonas PA0532 "PA0532 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595729; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];7e-97 AE004490 "Hypothetical, unclassified, unknown" Class 4 PA0533_at probable transcriptional regulator PA0533 GerE Pseudomonas PA0533 PA0533 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators "6355 // regulation of transcription, DNA-dependent // extended:Unknown; PAC; 0.3" "GerE // Bacterial regulatory proteins, luxR family;2.1e-23 /// PAC // PAC motif;0.0029" d1fsea_ // a.4.6.2 // Germination protein GerE;7.59e-18 15890276; (NC_003063) AGR_L_329p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];e-130 ; 15595730; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];0.0 AE004490 44% similar to a region of putative sensory transduction histidine kinase [Methanobacterium thermoautotrophicum]. Transcriptional regulators Class 3 PA0534_at conserved hypothetical protein PA0534 Pseudomonas PA0534 PA0534 /DEF=conserved hypothetical protein /FUNCTION=Putative enzymes d1el8a1 // c.3.1.2 // Sarcosine oxidase;1.27e-46 16129262; (NC_000913) probable oxidoreductase [Escherichia coli K12];1e-81 ; 15595731; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 EC:1.14.99.7 // ERG1_HUMAN SQUALENE MONOOXYGENASE (EC 1.14.99.7) (SQUALENE EPOXIDASE) (SE).;7.47e-27 /// EC:1.4.3.3 // OXDA_HUMAN D-AMINO ACID OXIDASE (EC 1.4.3.3) (DAMOX) (DAO) (DAAO).;3.49e-27 AE004490 58% similar to probable oxidoreductase OrdL [Escherichia coli]. Putative enzymes Class 4 PA0535_at probable transcriptional regulator PA0535 HTH_3 Pseudomonas PA0535 PA0535 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3677 // DNA binding // extended:inferred from electronic annotation; HTH_3; 1.1e-11 HTH_3 // Helix-turn-helix;1.1e-11 "d1b0na2 // a.35.1.3 // SinR repressor, DNA-binding domain;3.94e-13" 15595732; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-101 ; 13471336; (NC_002678) probable transcriptional regulator [Mesorhizobium loti];1e-20 AE004490 48% similar to putative aldehyde dehydrogenase [Azotobacter vinelandii]. Transcriptional regulators Class 3 PA0536_at hypothetical protein PA0536 Pseudomonas PA0536 "PA0536 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF477 // Protein of unknown function (DUF477);1.4e-43 15595733; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15596648; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];2e-51 numtm:2;Nin-prob:0.21405;Type:SIGNAL;Span:TM from 215 to 237: Eval:0.72168/TM from 250 to 272: Eval:0.35328 AE004490 45% similar to hypothetical protein YgcG [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0537_at conserved hypothetical protein PA0537 LemA Pseudomonas PA0537 "PA0537 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" LemA // LemA family;5.8e-127 15595734; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-110 ; 13473507; (NC_002678) hypothetical protein [Mesorhizobium loti];2e-49 AE004490 64% similar to hypothetical protein Tp70 [Treponema pallidum]. "Hypothetical, unclassified, unknown" Class 4 PA0538_dsbB_at disulfide bond formation protein PA0538 DsbB Pseudomonas PA0538 "PA0538 /GENE=dsbB /DEF=disulfide bond formation protein /FUNCTION=Chaperones & heat shock proteins; Translation, post-translational modification, degradation" 15035 // protein disulfide oxidoreductase activity // extended:Unknown; DsbB; 5.2e-14 DsbB // Disulfide bond formation protein DsbB;5.2e-14 15601911; (NC_002663) DsbB [Pasteurella multocida];1e-20 ; 15595735; (NC_002516) disulfide bond formation protein [Pseudomonas aeruginosa];7e-94 numtm:4;Nin-prob:0.99406;Type: ;Span:TM from 12 to 34: Eval:0.72811/TM from 44 to 63: Eval:0.76836/TM from 70 to 92: Eval:0.40901/TM from 143 to 165: Eval:0.58279 AE004490 51% similar to disulfide bond formation protein DsbB [Escherichia coli]. "Chaperones & heat shock proteins; Translation, post-translational modification, degradation" 95045404 Class 2 PA0539_at hypothetical protein PA0539 DUF6 Pseudomonas PA0539 "PA0539 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 16020 // membrane // extended:Unknown; DUF6; 8.2e-06 DUF6 // Integral membrane protein DUF6;1.6e-10 15964999; (NC_003047) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti];4e-42 ; 15595736; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-158 numtm:9;Nin-prob:0.3849;Type: ;Span:TM from 4 to 21: Eval:0.60873/TM from 28 to 50: Eval:0.74296/TM from 55 to 74: Eval:0.92328/TM from 83 to 105: Eval:0.92711/TM from 115 to 134: Eval:0.53342/TM from 141 to 158: Eval:0.62713/TM from 168 to 190: Eval:0.88958/TM from 202 to 224: Eval:0.83434/TM from 256 to 273: Eval:0.92619 AE004490 "Hypothetical, unclassified, unknown; Membrane proteins" Class 4 PA0540_at hypothetical protein PA0540 Pseudomonas PA0540 "PA0540 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595737; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];4e-69 ; 15794121; (NC_003116) putative membrane protein [Neisseria meningitidis Z2491];4e-25 numtm:4;Nin-prob:0.2375;Type: ;Span:TM from 4 to 26: Eval:0.61040/TM from 57 to 76: Eval:0.68444/TM from 86 to 103: Eval:0.57591/TM from 110 to 127: Eval:0.78814 AE004490 "Hypothetical, unclassified, unknown" Class 4 PA0541_at hypothetical protein PA0541 Cytochrome_C_2 Pseudomonas PA0541 "PA0541 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 5489 // electron transporter activity // extended:Unknown; Cytochrome_C_2; 2.6e-11 Cytochrome_C_2 // Cytochrome C';2.6e-11 d1cgn__ // a.24.3.2 // Cytochrome c';1.33e-31 15794066; (NC_003116) putative C-type cytochrome [Neisseria meningitidis Z2491];6e-10 ; 15595738; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];5e-85 AE004490 "Hypothetical, unclassified, unknown" 0 Class 4 PA0542_at conserved hypothetical protein PA0542 Pseudomonas PA0542 "PA0542 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595739; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];6e-71 ; 13432259; Protein yqjC precursor;6e-14 AE004490 62% similar to hypothetical protein YqjC [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0543_at hypothetical protein PA0543 Pseudomonas PA0543 "PA0543 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3.1.1.45 EC:3.1.1.45; TFE2_ALCEU CARBOXYMETHYLENEBUTENOLIDASE II (EC 3.1.1.45) (DIENELACTONE HYDROLASE II) (DLH II).;2.3e-08 d1jjfa_ // c.69.1.2 // Feruloyl esterase domain of the cellulosomal xylanase z;2.5e-21 15607811; (NC_000962) lpqP [Mycobacterium tuberculosis H37Rv];9e-28 ; 15595740; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:1;Nin-prob:0.99727;Type:SIGNAL;Span:TM from 5 to 27: Eval:0.72480 EC:3.4.14.5 // DPP4_HUMAN DIPEPTIDYL PEPTIDASE IV (EC 3.4.14.5) (DPP IV) (T-CELL ACTIVATION ANTIGEN CD26) (TP103) (ADENOSINE DEAMINASE COMPLEXING PROTEIN-2) (ADABP).;4.82e-12 /// EC:3.1.1.1 // ESTD_HUMAN ESTERASE D (EC 3.1.1.1).;2.37e-30 AE004490 45% similar to hypothetical protein LpqC [Mycobacterium tuberculosis]. "Hypothetical, unclassified, unknown" Class 4 PA0544_at hypothetical protein PA0544 Metallophos Pseudomonas PA0544 "PA0544 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 16787 // hydrolase activity // extended:Unknown; Metallophos; 3.2e-12 Metallophos // Calcineurin-like phosphoesterase;3.2e-12 d1qhwa_ // d.159.1.1 // Mammalian purple acid phosphatase;5.37e-08 15595741; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-147 ; 14518358; (NC_002806) MS153 [Microscilla sp. PRE1];5e-20 AE004490 "Hypothetical, unclassified, unknown" Class 4 PA0545_at hypothetical protein PA0545 FAD_binding_6 Pseudomonas PA0545 PA0545 /DEF=hypothetical protein /FUNCTION=Putative enzymes 16491 // oxidoreductase activity // extended:Unknown; FAD_binding_6; 1.1e-07 1.18.1.3 "EC:1.18.1.3; XYLZ_PSEPU TOLUATE 1,2-DIOXYGENASE ELECTRON TRANSFER COMPONENT [INCLUDES: FERREDOXIN; FERREDOXIN--NAD(+) REDUCTASE (EC 1.18.1.3)].;2.1e-36" FAD_binding_6 // Oxidoreductase FAD-binding domain;1.1e-07 d1qfja1 // b.43.4.2 // NAD(P)H:flavin oxidoreductase;5.16e-13 /// d2pia_2 // c.25.1.2 // Phthalate dioxygenase reductase;5.35e-22 "15595742; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15600921; (NC_002506) oxidoreductase, putative [Vibrio cholerae];1e-59" numtm:5;Nin-prob:0.97693;Type: ;Span:TM from 3 to 21: Eval:0.84323/TM from 36 to 56: Eval:0.91993/TM from 77 to 99: Eval:0.86044/TM from 158 to 177: Eval:0.72378/TM from 181 to 203: Eval:0.50255 "EC:1.6.6.2 // NIA_BETVE NITRATE REDUCTASE [NAD(P)H] (EC 1.6.6.2) (NR).;7.79e-40 /// EC:1.18.1.3 // XYLZ_PSEPU TOLUATE 1,2-DIOXYGENASE ELECTRON TRANSFER COMPONENT [INCLUDES: FERREDOXIN FERREDOXIN--NAD(+) REDUCTASE (EC 1.18.1.3)].;3.08e-50" AE004491 48% similar to a region of methane monooxygenase component C [Methylococcus capsulatus]. Putative enzymes Class 4 PA0546_metK_at 2.5.1.6 methionine adenosyltransferase PA0546 S-AdoMet_syntD3 Pseudomonas PA0546 PA0546 /GENE=metK /DEF=methionine adenosyltransferase /FUNCTION=Amino acid biosynthesis and metabolism; Central intermediary metabolism 4478 // methionine adenosyltransferase activity // extended:inferred from mutant phenotype; S-AdoMet_synt; 1.5e-50 /// 4478 // methionine adenosyltransferase activity // extended:inferred from mutant phenotype; 2.5.1.6; 1.12e-175 2.5.1.6 EC:2.5.1.6; METL_HUMAN S-ADENOSYLMETHIONINE SYNTHETASE ALPHA AND BETA FORMS (EC 2.5.1.6) (METHIONINE ADENOSYLTRANSFERASE) (ADOMET SYNTHETASE) (MAT-I/III).;6.6e-168 "S-AdoMet_syntD3 // S-adenosylmethionine synthetase, C-terminal domain;2.3e-83 /// S-AdoMet_synt // S-adenosylmethionine synthetase, N-terminal domain;1.5e-50 /// S-AdoMet_syntD2 // S-adenosylmethionine synthetase, central domain;1.1e-73" d1mxa_1 // d.130.1.1 // S-adenosylmethionine synthetase;6.95e-39 15595743; (NC_002516) methionine adenosyltransferase [Pseudomonas aeruginosa];0.0 ; 15836994; (NC_002488) methionine adenosyltransferase [Xylella fastidiosa 9a5c];e-170 EC:2.5.1.6 // METL_HUMAN S-ADENOSYLMETHIONINE SYNTHETASE ALPHA AND BETA FORMS (EC 2.5.1.6) (METHIONINE ADENOSYLTRANSFERASE) (ADOMET SYNTHETASE) (MAT-I/III).;1.12e-175 AE004491 82% similar to MetK gene product of E. coli Methionine metabolism; Selenoamino acid metabolism Amino acid biosynthesis and metabolism; Central intermediary metabolism 85054924 Class 2 PA0547_at probable transcriptional regulator PA0547 HTH_5 Pseudomonas PA0547 PA0547 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators 3700 // transcription factor activity // extended:inferred from direct assay; HTH_5; 3.1e-10 2.1.1.17 "EC:2.1.1.17; PMTA_RHOSH PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE (EC 2.1.1.17).;3.2e-28 ; EC:2.1.1.64; UBIG_SALTY 3-DEMETHYLUBIQUINONE-9 3-METHYLTRANSFERASE (EC 2.1.1.64) (3,4-DIHYDROXY-5-HEXAPRENYLBENZOATE METHYLTRANSFERASE) (DHHB METHYLTRANSFERASE) (FRAGMENT).;2.2e-31" "HTH_5 // Bacterial regulatory protein, arsR family;3.1e-10" d1i9ga_ // c.66.1.13 // Probable methyltransferase Rv2118c;4.44e-10 /// d1smta_ // a.4.5.5 // SmtB repressor;7.94e-20 "16126380; (NC_002696) transcriptional regulator, ArsR family [Caulobacter crescentus CB15];7e-32 ; 15595744; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];0.0" EC:2.1.1.17 // PMTA_RHOSH PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE (EC 2.1.1.17).;4.75e-32 AE004491 49% similar to a region of unknown protein [Streptomyces fradiae Transposon Tn4556]. Transcriptional regulators Class 3 PA0548_tktA_at 2.2.1.1 transketolase PA0548 transketolase Pseudomonas PA0548 PA0548 /GENE=tktA /DEF=transketolase /FUNCTION=Energy metabolism 2.2.1.3 EC:2.2.1.3; DAS_PICAN DIHYDROXY-ACETONE SYNTHASE (EC 2.2.1.3) (DHAS) (FORMALDEHYDE TRANSKETOLASE) (GLYCERONE SYNTHASE).;3.2e-238 "transket_pyr // Transketolase, pyridine binding domain;3.8e-64 /// transketolase // Transketolase, thiamine diphosphate binding domain;3.3e-240 /// transketolase_C // Transketolase, C-terminal domain;8.5e-10" "d1gpua1 // c.36.1.2 // Transketolase, TK;1.08e-124 /// d1gpua3 // c.48.1.1 // Transketolase, TK;2.87e-45" 15595745; (NC_002516) transketolase [Pseudomonas aeruginosa];0.0 ; 15833064; (NC_002695) transketolase 1 isozyme [Escherichia coli O157:H7];0.0 numtm:1;Nin-prob:0.18969;Type: ;Span:TM from 416 to 438: Eval:0.49614 "EC:2.2.1.3 // DAS_PICAN DIHYDROXY-ACETONE SYNTHASE (EC 2.2.1.3) (DHAS) (FORMALDEHYDE TRANSKETOLASE) (GLYCERONE SYNTHASE).;2.94e-245 /// EC:1.2.4.4 // ODBB_HUMAN 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT, MITOCHONDRIAL PRECURSOR (EC 1.2.4.4) (BRANCHED-CHAIN ALPHA-KETO ACID DEHYDROGENASE COMPONENT BETA CHAIN (E1)) (BCKDH E1-BETA).;3.02e-28" AE004491 84% similar to tktA gene product of E. coli Carbon fixation; Pentose phosphate cycle Energy metabolism 94060107 Class 2 PA0549_at hypothetical protein PA0549 Pseudomonas PA0549 "PA0549 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595746; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004491 "Hypothetical, unclassified, unknown" Class 4 PA0550_at conserved hypothetical protein PA0550 Pseudomonas PA0550 "PA0550 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" d1k77a_ // c.1.15.5 // Hypothetical protein YgbM (EC1530);2.21e-93 15595747; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-158 ; 2494740; Hypothetical 28.3 kDa protein in gbd 5'region (ORF4);e-108 AE004491 64% similarity to ygbM gene product of E. coli "Hypothetical, unclassified, unknown" Class 4 PA0551_epd_at 1.2.1.- D-erythrose 4-phosphate dehydrogenase PA0551 gpdh_C Pseudomonas PA0551 "PA0551 /GENE=epd /DEF=D-erythrose 4-phosphate dehydrogenase /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 4365 // glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) activity // extended:inferred from electronic annotation; gpdh; 6e-57 1.2.1.12 "EC:1.2.1.12; G3PT_HUMAN PUTATIVE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, TESTIS-SPECIFIC (EC 1.2.1.12) (GAPDH-2).;1.2e-117 ; EC:1.2.1.59; G3P2_SYNY3 GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 2 (EC 1.2.1.59) (GAPDH 2) (GAP-2) (NAD(P)-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE).;5.2e-106" "gpdh // Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;6e-57 /// gpdh_C // Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain;4.9e-70" d1cero2 // d.81.1.1 // Glyceraldehyde-3-phosphate dehydrogenase (GAPDH);3.16e-48 /// d1gado1 // c.2.1.3 // Glyceraldehyde-3-phosphate dehydrogenase (GAPDH);1.83e-46 15595748; (NC_002516) D-erythrose 4-phosphate dehydrogenase [Pseudomonas aeruginosa];0.0 ; 15803461; (NC_002655) D-erythrose 4-phosphate dehydrogenase [Escherichia coli O157:H7 EDL933];2e-97 EC:1.2.1.59 // G3P2_SYNY3 GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 2 (EC 1.2.1.59) (GAPDH 2) (GAP-2) (NAD(P)-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE).;1.15e-109 /// EC:1.4.1.16 // DDH_CORGL MESO-DIAMINOPIMELATE D-DEHYDROGENASE (EC 1.4.1.16).;3.7e-42 AE004491 72% similar to gapB gene product of E. coli Vitamin B6 metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" 95270598; 97326079 Class 2 PA0552_pgk_at 2.7.2.3 phosphoglycerate kinase PA0552 PGK Pseudomonas PA0552 PA0552 /GENE=pgk /DEF=phosphoglycerate kinase /FUNCTION=Carbon compound catabolism; Energy metabolism 4618 // phosphoglycerate kinase activity // extended:inferred from electronic annotation; 2.7.2.3; 1.07e-136 /// 4618 // phosphoglycerate kinase activity // extended:inferred from electronic annotation; PGK; 5.7e-200 2.7.2.3 "EC:2.7.2.3; PGK2_HUMAN PHOSPHOGLYCERATE KINASE, TESTIS SPECIFIC (EC 2.7.2.3).;7e-132" PGK // Phosphoglycerate kinase;5.7e-200 d1php__ // c.86.1.1 // Phosphoglycerate kinase;7.61e-137 6468411; (AJ251129) phosphoglycerate kinase [Pseudomonas sp. 'TAC II 18'];0.0 ; 15595749; (NC_002516) phosphoglycerate kinase [Pseudomonas aeruginosa];0.0 "EC:2.7.2.3 // PGK2_HUMAN PHOSPHOGLYCERATE KINASE, TESTIS SPECIFIC (EC 2.7.2.3).;1.07e-136" AE004491 82% similar to pgk gene product of E. coli Carbon fixation; Glycolysis / Gluconeogenesis Carbon compound catabolism; Energy metabolism 89313302; 97307747 Class 2 PA0553_at hypothetical protein PA0553 Pseudomonas PA0553 "PA0553 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595750; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-33 AE004492 "Hypothetical, unclassified, unknown" Class 4 PA0554_at hypothetical protein PA0554 Pseudomonas PA0554 "PA0554 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595751; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-63 AE004492 "Hypothetical, unclassified, unknown" Class 4 PA0555_fda_at 4.1.2.13 "fructose-1,6-bisphosphate aldolase" PA0555 F_bP_aldolase Pseudomonas PA0555 "PA0555 /GENE=fda /DEF=fructose-1,6-bisphosphate aldolase /FUNCTION=Carbon compound catabolism; Central intermediary metabolism" 4332 // fructose-bisphosphate aldolase activity // extended:traceable author statement; F_bP_aldolase; 1.5e-165 F_bP_aldolase // Fructose-bisphosphate aldolase class-II;1.5e-165 "d1gvfa_ // c.1.10.2 // Tagatose-1,6-bisphosphate aldolase;7.5e-101" "7387537; FRUCTOSE-BISPHOSPHATE ALDOLASE;0.0 ; 15595752; (NC_002516) fructose-1,6-bisphosphate aldolase [Pseudomonas aeruginosa];0.0" AE004492 97% similar to fda gene product of [Pseudomonas stutzeri]; 82% similar to cbbA gene products of [Alcaligenes eutrophus] and [Xanthobacter flavus] Carbon fixation; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis; Pentose phosphate cycle Carbon compound catabolism; Central intermediary metabolism 95283415; 89193446 Class 2 PA0556_at hypothetical protein PA0556 Pseudomonas PA0556 "PA0556 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595753; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];3e-90 AE004492 "Hypothetical, unclassified, unknown" Class 4 PA0557_at hypothetical protein PA0557 Pseudomonas PA0557 "PA0557 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "d1qjga_ // d.17.4.3 // Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI;5.8e-18" 15964125; (NC_003047) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti];1e-17 ; 15595754; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-131 AE004492 "Hypothetical, unclassified, unknown" Class 4 PA0558_at conserved hypothetical protein PA0558 Pseudomonas PA0558 "PA0558 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 2.1.1.20 EC:2.1.1.20; GLMT_HUMAN GLYCINE N-METHYLTRANSFERASE (EC 2.1.1.20).;4.3e-21 d1l1ea_ // c.66.1.18 // PccA;1.02e-15 19115382; (NC_003424) putative methyltransferase [Schizosaccharomyces pombe];3e-44 ; 15595755; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-143 EC:2.1.1.20 // GLMT_HUMAN GLYCINE N-METHYLTRANSFERASE (EC 2.1.1.20).;3.83e-29 AE004492 51% similar to hypothetical protein Rv3342 [Mycobacterium tuberculosis]. "Hypothetical, unclassified, unknown" Class 4 PA0559_at conserved hypothetical protein PA0559 HI0933_like Pseudomonas PA0559 "PA0559 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 1.16.1.1 EC:1.16.1.1; MERA_THIFE MERCURIC REDUCTASE (EC 1.16.1.1) (HG(II) REDUCTASE).;7.9e-10 HI0933_like // HI0933-like protein;5.9e-202 d1trb_1 // c.3.1.5 // Thioredoxin reductase;1.05e-10 15595756; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15640112; (NC_002505) conserved hypothetical protein [Vibrio cholerae];e-123 numtm:1;Nin-prob:0.67012;Type: ;Span:TM from 7 to 24: Eval:0.72762 "EC:1.14.13.50 // PCPB_FLAS3 PENTACHLOROPHENOL 4-MONOOXYGENASE (EC 1.14.13.50) (PENTACHLOROPHENOL HYDROXYLASE).;1.82e-19 /// EC:1.4.3.16 // NADB_SYNY3 L-ASPARTATE OXIDASE (EC 1.4.3.16) (QUINOLINATE SYNTHETASE B).;1.58e-36 /// EC:1.4.1.13 // GLTD_ECOLI GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (EC 1.4.1.13) (GLUTAMATE SYNTHASE BETA SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN).;1.67e-22 /// EC:1.3.99.4 // 3O1D_NOCOP 3-OXOSTEROID 1-DEHYDROGENASE (EC 1.3.99.4).;7.63e-12 /// EC:1.8.1.4 // DLDH_HUMAN DIHYDROLIPOAMIDE DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (EC 1.8.1.4).;1.39e-26 /// EC:1.13.12.10 // IUCD_ECOLI L-LYSINE 6-MONOOXYGENASE (EC 1.13.12.10) (LYSINE N6-HYDROXYLASE).;2.53e-11 /// EC:5.4.99.9 // GLF_MYCPN UDP-GALACTOPYRANOSE MUTASE (EC 5.4.99.9).;6.54e-35" AE004492 70% similar to YhiN gene products of E. coli and H. influenzae "Hypothetical, unclassified, unknown" 94316500 Class 4 PA0560_at conserved hypothetical protein PA0560 Pseudomonas PA0560 "PA0560 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" "15595757; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];4e-90 ; 15803626; (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7 EDL933];6e-57" AE004492 78% similar to hypothetical gene product ygjP of [E. coli] "Hypothetical, unclassified, unknown" Class 4 PA0561_at hypothetical protein PA0561 Pseudomonas PA0561 "PA0561 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595758; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:7;Nin-prob:0.9556;Type: ;Span:TM from 37 to 56: Eval:0.61528/TM from 66 to 85: Eval:0.84628/TM from 173 to 195: Eval:0.80327/TM from 210 to 232: Eval:0.97749/TM from 304 to 326: Eval:0.37881/TM from 336 to 353: Eval:0.70626/TM from 360 to 382: Eval:0.35487 AE004492 "Hypothetical, unclassified, unknown" Class 4 PA0562_at probable hydrolase PA0562 Hydrolase Pseudomonas PA0562 PA0562 /DEF=probable hydrolase /FUNCTION=Putative enzymes 16787 // hydrolase activity // extended:Unknown; Hydrolase; 1.1e-27 3.1.3.68 EC:3.1.3.68; DOG2_YEAST 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 (EC 3.1.3.68) (2-DOG-6-P 2) (2-DEOXYGLUCOSE-6-PHOSPHATASE 2).;5.6e-45 ; EC:3.8.1.2; HAD_XANAU 2-HALOALKANOIC ACID DEHALOGENASE (EC 3.8.1.2) (L-2-HALOACID DEHALOGENASE) (HALOCARBOXYLIC ACID HALIDOHYDROLASE).;1.6e-33 ; EC:5.4.2.6; PGMB_LACLA BETA-PHOSPHOGLUCOMUTASE (EC 5.4.2.6) (BETA-PGM).;5.2e-37 ; EC:3.1.3.18; GPH_SYNP7 PHOSPHOGLYCOLATE PHOSPHATASE (EC 3.1.3.18) (PGP).;5e-33 ; EC:3.8.1.3; DEH2_MORSP HALOACETATE DEHALOGENASE H-2 (EC 3.8.1.3).;1.9e-34 Hydrolase // haloacid dehalogenase-like hydrolase;1.1e-27 d1lvha_ // c.108.1.6 // beta-Phosphoglucomutase;6.96e-46 13476247; (NC_002678) hypothetical protein [Mesorhizobium loti];6e-33 ; 15595759; (NC_002516) probable hydrolase [Pseudomonas aeruginosa];e-121 EC:3.8.1.2 // HAD_XANAU 2-HALOALKANOIC ACID DEHALOGENASE (EC 3.8.1.2) (L-2-HALOACID DEHALOGENASE) (HALOCARBOXYLIC ACID HALIDOHYDROLASE).;4.75e-48 /// EC:3.1.3.18 // GPH_SYNP7 PHOSPHOGLYCOLATE PHOSPHATASE (EC 3.1.3.18) (PGP).;2.7e-34 /// EC:5.4.2.6 // PGMB_LACLA BETA-PHOSPHOGLUCOMUTASE (EC 5.4.2.6) (BETA-PGM).;9.98e-45 AE004492 45-50% similarity to hypothetical ORFs of approx. same size from Rhodobacter and E. coli Putative enzymes Class 3 PA0563_at conserved hypothetical protein PA0563 Pseudomonas PA0563 "PA0563 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF805 // Protein of unknown function (DUF805);8.1e-48 15803645; (NC_002655) putative cytochrome [Escherichia coli O157:H7 EDL933];2e-22 ; 15595760; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];4e-63 numtm:3;Nin-prob:0.77949;Type: ;Span:TM from 24 to 46: Eval:0.40914/TM from 50 to 67: Eval:0.84260/TM from 80 to 99: Eval:0.58261 AE004492 64% similarity to YhaH gene product of E. coli; 59% similarity to YhaI gene product. "Hypothetical, unclassified, unknown" Class 4 PA0564_at probable transcriptional regulator PA0564 HTH_AraC Pseudomonas PA0564 PA0564 /DEF=probable transcriptional regulator /FUNCTION=Transcriptional regulators "6355 // regulation of transcription, DNA-dependent // extended:Unknown; AraC_binding; 1e-22" "AraC_binding // AraC-like ligand binding domain;1e-22 /// HTH_AraC // Bacterial regulatory helix-turn-helix proteins, araC family;2.2e-19" "15595761; (NC_002516) probable transcriptional regulator [Pseudomonas aeruginosa];e-174 ; 16272984; (NC_000907) transcriptional regulator, araC family, putative [Haemophilus influenzae Rd];2e-50" AE004492 57% similarity to hypothetical transcriptional regulator HI1052 from H. influenzae Transcriptional regulators Class 3 PA0565_at conserved hypothetical protein PA0565 CMD Pseudomonas PA0565 "PA0565 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 3824 // catalytic activity // extended:Unknown; CMD; 1.3e-26 CMD // Carboxymuconolactone decarboxylase family;1.3e-26 15595762; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];2e-57 ; 15794675; (NC_003116) conserved hypothetical protein [Neisseria meningitidis Z2491];5e-36 AE004492 79% similar to conserved hypothetical protein HI1053 [Haemophilus influenzae Rd]. "Hypothetical, unclassified, unknown" Class 4 PA0566_at hypothetical protein PA0566 Pseudomonas PA0566 "PA0566 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595763; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-95 numtm:4;Nin-prob:0.96568;Type: ;Span:TM from 13 to 35: Eval:0.65046/TM from 48 to 70: Eval:0.92873/TM from 77 to 96: Eval:0.98067/TM from 111 to 133: Eval:0.77467 AE004492 "Hypothetical, unclassified, unknown" Class 4 PA0567_i_at conserved hypothetical protein PA0567 UPF0057 Pseudomonas PA0567 "PA0567 /DEF=conserved hypothetical protein /FUNCTION=Membrane proteins; Hypothetical, unclassified, unknown" UPF0057 // Uncharacterized protein family UPF0057;7e-23 15887763; (NC_003062) AGR_C_727p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)];1e-16 ; 15595764; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];4e-23 numtm:2;Nin-prob:0.92371;Type:SIGNAL;Span:TM from 7 to 24: Eval:0.67398/TM from 28 to 50: Eval:0.61586 AE004493 78% similar to YqaE gene product of E. coli "Membrane proteins; Hypothetical, unclassified, unknown" Class 4 PA0568_at hypothetical protein PA0568 Pseudomonas PA0568 "PA0568 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595765; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];4e-88 AE004493 "Hypothetical, unclassified, unknown" Class 4 PA0569_at hypothetical protein PA0569 Pseudomonas PA0569 "PA0569 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595766; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];6e-92 AE004493 "Hypothetical, unclassified, unknown" Class 4 PA0570_at hypothetical protein PA0570 Pseudomonas PA0570 "PA0570 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595767; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];1e-63 AE004493 "Hypothetical, unclassified, unknown" Class 4 PA0571_at hypothetical protein PA0571 Pseudomonas PA0571 "PA0571 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595768; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-118 AE004493 "Hypothetical, unclassified, unknown" Class 4 PA0572_at hypothetical protein PA0572 Pseudomonas PA0572 "PA0572 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595769; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004493 "Hypothetical, unclassified, unknown" Class 4 PA0573_at hypothetical protein PA0573 Pseudomonas PA0573 "PA0573 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595770; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];2e-62 numtm:1;Nin-prob:0.09266;Type:SIGNAL;Span:TM from 5 to 27: Eval:0.88499 AE004493 "Hypothetical, unclassified, unknown" Class 4 PA0574_at hypothetical protein PA0574 Fic Pseudomonas PA0574 "PA0574 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 74 // regulation of cell cycle // extended:Unknown; Fic; 1.8e-36 Fic // Fic protein family;1.8e-36 10956862; (NC_002033) unknown [Novosphingobium aromaticivorans];3e-64 ; 15595771; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];0.0 AE004493 57% similar to hypothetical ORF of [Sphingomonas aromaticivorans]. "Hypothetical, unclassified, unknown" Class 4 PA0575_at conserved hypothetical protein PA0575 EAL Pseudomonas PA0575 "PA0575 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown; Membrane proteins" 5215 // transporter activity // extended:traceable author statement; SBP_bac_3; 4.2e-45 4.2.1.51 EC:4.2.1.51; PHEC_PSEAE CYCLOHEXADIENYL DEHYDRATASE PRECURSOR [INCLUDES: PREPHENATE DEHYDRATASE (EC 4.2.1.51); AROGENATE DEHYDRATASE (EC 4.-.-.-)].;7e-41 "PAS // PAS domain;1.7e-22 /// SBP_bac_3 // Bacterial extracellular solute-binding proteins, family 3;4.2e-45 /// GGDEF // GGDEF domain;6.7e-75 /// PAC // PAC motif;1.1e-27 /// EAL // EAL domain;5.5e-121" d1dp6a_ // d.110.3.2 // Histidine kinase FixL heme domain;4.83e-21 /// d1wdna_ // c.94.1.1 // Glutamine-binding protein;8.98e-44 15595482; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-159 ; 15595772; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 numtm:1;Nin-prob:0.42046;Type:SIGNAL;Span:TM from 268 to 290: Eval:0.41682 EC:4.2.1.51 // PHEC_PSEAE CYCLOHEXADIENYL DEHYDRATASE PRECURSOR [INCLUDES: PREPHENATE DEHYDRATASE (EC 4.2.1.51) AROGENATE DEHYDRATASE (EC 4.-.-.-)].;1.58e-54 AE004493 C-terminal portion 57% similar to nitrogen fixation positive activator protein of [Synechocystis sp.]. "Hypothetical, unclassified, unknown; Membrane proteins" 99286376 Class 4 PA0576_rpoD_at sigma factor RpoD PA0576 sigma70_r1_1 Pseudomonas PA0576 PA0576 /GENE=rpoD /DEF=sigma factor RpoD /FUNCTION=Transcriptional regulators "sigma70_r1_1 // Sigma-70 factor, region 1.1;2.7e-40 /// sigma70_r4 // Sigma-70, region 4;1.7e-22 /// sigma70_r3 // Sigma-70 region 3;6e-43 /// sigma70_r1_2 // Sigma-70 factor, region 1.2;4.7e-15 /// sigma70_ner // Sigma-70, non-essential region;1.8e-136 /// sigma70_r2 // Sigma-70 region 2;1.4e-28" d1ku3a_ // a.112.1.1 // Sigma factor SigA fragments;8.57e-18 1710687; RNA POLYMERASE SIGMA FACTOR RPOD (SIGMA-70);0.0 ; 15595773; (NC_002516) sigma factor RpoD [Pseudomonas aeruginosa];0.0 AE004494 100% identical to RpoD gene product of PAO1. Transcriptional regulators Class 1 PA0577_dnaG_at 2.7.7.- DNA primase PA0577 zf-CHC2 Pseudomonas PA0577 "PA0577 /GENE=dnaG /DEF=DNA primase /FUNCTION=DNA replication, recombination, modification and repair" 3677 // DNA binding // extended:inferred from electronic annotation; zf-CHC2; 5.5e-69 zf-CHC2 // CHC2 zinc finger;5.5e-69 /// Toprim // Toprim domain;4.1e-27 d1d0qa_ // g.41.3.2 // Zinc-binding domain of DNA primase;2.26e-40 /// d1dd9a_ // e.13.1.1 // DNA primase DnaG catalytic core;1.02e-110 15595774; (NC_002516) DNA primase [Pseudomonas aeruginosa];0.0 ; 9910810; DNA primase;0.0 AE004494 80% similar to DnaG gene product of [P. putida]; N-terminal 425 amino acids 75% similar to DNA primase of [E. coli]. "DNA replication, recombination, modification and repair" 83129424; 97368180 Class 2 PA0578_at conserved hypothetical protein PA0578 DUF186 Pseudomonas PA0578 "PA0578 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" GatB_Yqey // GatB/Yqey domain;7.2e-12 15640542; (NC_002505) conserved hypothetical protein [Vibrio cholerae];1e-35 ; 15595775; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];3e-76 AE004494 "70% similarity to unpublished 146 amino acid orfX of [Legionella pneumophila]; 62% similar to a published but ""unknown"" ORF of [Myxococcus xanthus]." "Hypothetical, unclassified, unknown" Class 4 PA0579_rpsU_at 30S ribosomal protein S21 PA0579 Ribosomal_S21 Pseudomonas PA0579 "PA0579 /GENE=rpsU /DEF=30S ribosomal protein S21 /FUNCTION=Hypothetical, unclassified, unknown" 3735 // structural constituent of ribosome // extended:inferred from electronic annotation; Ribosomal_S21; 7.2e-34 Ribosomal_S21 // Ribosomal protein S21;7.2e-34 15595776; (NC_002516) 30S ribosomal protein S21 [Pseudomonas aeruginosa];4e-34 ; 6226094; 30S ribosomal protein S21;1e-32 AE004494 97% identical to rpsU gene product of [P. putida]; 86% similar to rpsU gene product of [E. coli] "Translation, post-translational modification, degradation" 83129424; 86137422; 83218520 Class 2 PA0580_gcp_at 3.4.24.57 O-sialoglycoprotein endopeptidase PA0580 Peptidase_M22 Pseudomonas PA0580 "PA0580 /GENE=gcp /DEF=O-sialoglycoprotein endopeptidase /FUNCTION=Translation, post-translational modification, degradation" 8450 // O-sialoglycoprotein endopeptidase activity // extended:Unknown; Peptidase_M22; 1.7e-131 /// 8450 // O-sialoglycoprotein endopeptidase activity // extended:Unknown; 3.4.24.57; 9.9e-117 3.4.24.57 EC:3.4.24.57; GCP_TREPA PROBABLE O-SIALOGLYCOPROTEIN ENDOPEPTIDASE (EC 3.4.24.57) (GLYCOPROTEASE).;2.8e-113 Peptidase_M22 // Glycoprotease family;1.7e-131 15603103; (NC_002663) Gcp [Pasteurella multocida];e-139 ; 15595777; (NC_002516) O-sialoglycoprotein endopeptidase [Pseudomonas aeruginosa];0.0 EC:3.4.24.57 // GCP_TREPA PROBABLE O-SIALOGLYCOPROTEIN ENDOPEPTIDASE (EC 3.4.24.57) (GLYCOPROTEASE).;9.9e-117 AE004494 85% similar to O-sialoglycoprotein endopeptidase [Pasteurella haemolytica]. 81% similarity to YgjD gene product of [E. coli] "Translation, post-translational modification, degradation" Class 2 PA0581_i_at conserved hypothetical protein PA0581 DUF205 Pseudomonas PA0581 "PA0581 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF205 // Domain of unknown function DUF;3.8e-54 15794194; (NC_003116) putative integral membrane protein [Neisseria meningitidis Z2491];3e-38 ; 15595778; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];e-105 numtm:4;Nin-prob:0.31089;Type: ;Span:TM from 4 to 26: Eval:0.54220/TM from 51 to 73: Eval:0.45263/TM from 109 to 131: Eval:0.64875/TM from 151 to 173: Eval:0.39214 AE004494 62% similar to YgiH gene products of E. coli and H. influenzae "Hypothetical, unclassified, unknown" 93285992 Class 4 PA0582_folB_at dihydroneopterin aldolase PA0582 FolB Pseudomonas PA0582 "PA0582 /GENE=folB /DEF=dihydroneopterin aldolase /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 4150 // dihydroneopterin aldolase activity // extended:inferred from electronic annotation; FolB; 5.4e-34 FolB // Dihydroneopterin aldolase;5.4e-34 "d1dhn__ // d.96.1.3 // 7,8-dihidroneopterin aldolase;3.47e-33" "15640546; (NC_002505) dihydroneopterin aldolase FolB, putative [Vibrio cholerae];5e-30 ; 15595779; (NC_002516) dihydroneopterin aldolase [Pseudomonas aeruginosa];2e-62" "EC:2.7.6.3 // SULD_STRPN BIFUNCTIONAL FOLATE SYNTHESIS PROTEIN [INCLUDES: DIHYDRONEOPTERIN ALDOLASE (EC 4.1.2.25) (DHNA) 2-AMINO-4-HYDROXY-6- HYDROXYMETHYLDIHYDROPTERIDINE PYROPHOSPHOKINASE (EC 2.7.6.3) (7,8- DIHYDRO-6-HYDROXYMETHYLPTERIN PYROPHOSPHOKINASE) (HPPK) (6- HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE) (PPPK)].;1.17e-26 /// EC:4.1.2.25 // SULD_STRPN BIFUNCTIONAL FOLATE SYNTHESIS PROTEIN [INCLUDES: DIHYDRONEOPTERIN ALDOLASE (EC 4.1.2.25) (DHNA) 2-AMINO-4-HYDROXY-6- HYDROXYMETHYLDIHYDROPTERIDINE PYROPHOSPHOKINASE (EC 2.7.6.3) (7,8- DIHYDRO-6-HYDROXYMETHYLPTERIN PYROPHOSPHOKINASE) (HPPK) (6- HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE) (PPPK)].;1.31e-26" AE004494 64% similar to dihydroneopterin aldolase FolB [Escherichia coli] "Biosynthesis of cofactors, prosthetic groups and carriers" Class 2 PA0583_at hypothetical protein PA0583 HPPK Pseudomonas PA0583 "PA0583 /DEF=hypothetical protein /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" 3848 // 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase activity // extended:Unknown; HPPK; 1.2e-22 4.1.2.25 "EC:4.1.2.25; SULD_STRPN BIFUNCTIONAL FOLATE SYNTHESIS PROTEIN [INCLUDES: DIHYDRONEOPTERIN ALDOLASE (EC 4.1.2.25) (DHNA); 2-AMINO-4-HYDROXY-6- HYDROXYMETHYLDIHYDROPTERIDINE PYROPHOSPHOKINASE (EC 2.7.6.3) (7,8- DIHYDRO-6-HYDROXYMETHYLPTERIN PYROPHOSPHOKINASE) (HPPK) (6- HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE) (PPPK)].;2e-24 ; EC:2.7.6.3; SULD_STRPN BIFUNCTIONAL FOLATE SYNTHESIS PROTEIN [INCLUDES: DIHYDRONEOPTERIN ALDOLASE (EC 4.1.2.25) (DHNA); 2-AMINO-4-HYDROXY-6- HYDROXYMETHYLDIHYDROPTERIDINE PYROPHOSPHOKINASE (EC 2.7.6.3) (7,8- DIHYDRO-6-HYDROXYMETHYLPTERIN PYROPHOSPHOKINASE) (HPPK) (6- HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE) (PPPK)].;2e-24" "HPPK // 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK);1.2e-22" "d1cbka_ // d.58.30.1 // 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK;1.55e-38" 15640547; (NC_002505) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Vibrio cholerae];2e-21 ; 15595780; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];e-102 "EC:2.7.6.3 // SULD_STRPN BIFUNCTIONAL FOLATE SYNTHESIS PROTEIN [INCLUDES: DIHYDRONEOPTERIN ALDOLASE (EC 4.1.2.25) (DHNA) 2-AMINO-4-HYDROXY-6- HYDROXYMETHYLDIHYDROPTERIDINE PYROPHOSPHOKINASE (EC 2.7.6.3) (7,8- DIHYDRO-6-HYDROXYMETHYLPTERIN PYROPHOSPHOKINASE) (HPPK) (6- HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE) (PPPK)].;3.27e-38 /// EC:4.1.2.25 // SULD_STRPN BIFUNCTIONAL FOLATE SYNTHESIS PROTEIN [INCLUDES: DIHYDRONEOPTERIN ALDOLASE (EC 4.1.2.25) (DHNA) 2-AMINO-4-HYDROXY-6- HYDROXYMETHYLDIHYDROPTERIDINE PYROPHOSPHOKINASE (EC 2.7.6.3) (7,8- DIHYDRO-6-HYDROXYMETHYLPTERIN PYROPHOSPHOKINASE) (HPPK) (6- HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE) (PPPK)].;1.08e-38 /// EC:2.5.1.15 // FAS_YEAST PROBABLE FOLIC ACID SYNTHESIS PROTEIN [INCLUDES: DIHYDRONEOPTERIN ALDOLASE (EC 4.1.2.25) (DHNA) (FASA) FASB DIHYDROPTEROATE SYNTHASE (EC 2.5.1.15) (DHPS) (DIHYDROPTEROATE PYROPHOSPHORYLASE) (FASC) 2- AMINO-4-HYDROXY-6-HYDROXYMETHYLDIHYDROPTERIDINE PYROPHOSPHOKINASE (EC 2.7.6.3) (7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN-PYROPHOSPHOKINASE) (HPPK) (6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE) (PPPK) (FASC)].;4.14e-51" AE004494 "49% similar to 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase FolK [Escherichia coli]." "Biosynthesis of cofactors, prosthetic groups and carriers" 97426617; 0 Class 4 PA0584_cca_at 2.7.7.21 tRNA nucleotidyl transferase PA0584 HD Pseudomonas PA0584 "PA0584 /GENE=cca /DEF=tRNA nucleotidyl transferase /FUNCTION=Transcription, RNA processing and degradation" 3723 // RNA binding // extended:inferred from direct assay; PolyA_pol; 1.8e-56 PolyA_pol // Poly A polymerase family;1.8e-56 /// HD // HD domain;3.1e-06 16130952; (NC_000913) tRNA nucleotidyl transferase [Escherichia coli K12];e-138 ; 15595781; (NC_002516) tRNA nucleotidyl transferase [Pseudomonas aeruginosa];0.0 AE004494 71% similar to tRNA nucleotidyl transferase [Escherichia coli]. "Transcription, RNA processing and degradation" 87033711 Class 2 PA0585_at hypothetical protein PA0585 Pseudomonas PA0585 "PA0585 /DEF=hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15595782; (NC_002516) hypothetical protein [Pseudomonas aeruginosa];5e-94 AE004494 "Hypothetical, unclassified, unknown" Class 4 PA0586_at conserved hypothetical protein PA0586 SpoVR Pseudomonas PA0586 "PA0586 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" SpoVR // SpoVR like protein;0 15595783; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 ; 15641876; (NC_002505) conserved hypothetical protein [Vibrio cholerae];0.0 AE004494 82% similar to hypothetical protein YcgB [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0587_at conserved hypothetical protein PA0587 DUF444 Pseudomonas PA0587 "PA0587 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF444 // Protein of unknown function (DUF444);6.6e-279 15641875; (NC_002505) conserved hypothetical protein [Vibrio cholerae];e-146 ; 15595784; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 AE004494 75% similar to hypothetical protein YeaH [Escherichia coli] "Hypothetical, unclassified, unknown" Class 4 PA0588_at conserved hypothetical protein PA0588 Pseudomonas PA0588 "PA0588 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" 15802197; (NC_002655) yeaG gene product [Escherichia coli O157:H7 EDL933];0.0 ; 15595785; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];0.0 AE004495 88% similar to hypothetical protein YeaG [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0589_at conserved hypothetical protein PA0589 Rhodanese Pseudomonas PA0589 PA0589 /DEF=conserved hypothetical protein /FUNCTION=Energy metabolism Rhodanese // Rhodanese-like domain;1.1e-16 d1gmxa_ // c.46.1.3 // Sulfurtransferase GlpE;8.47e-28 15833522; (NC_002695) protein of glp regulon [Escherichia coli O157:H7];3e-23 ; 15595786; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];1e-58 EC:2.8.1.2 // THTM_HUMAN 3-MERCAPTOPYRUVATE SULFURTRANSFERASE (EC 2.8.1.2) (MST).;1.06e-14 AE004495 72% similar to glpE protein [Escherichia coli]. Energy metabolism Class 4 PA0590_apaH_at 3.6.1.41 bis(5'-nucleosyl)-tetraphosphatase PA0590 Metallophos Pseudomonas PA0590 PA0590 /GENE=apaH /DEF=bis(5'-nucleosyl)-tetraphosphatase /FUNCTION=Nucleotide biosynthesis and metabolism 16787 // hydrolase activity // extended:Unknown; Metallophos; 8.8e-14 /// 8803 // bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity // extended:inferred from electronic annotation; 3.6.1.41; 1.22e-82 3.6.1.41 "EC:3.6.1.41; APAH_SALTY BIS(5-NUCLEOSYL)-TETRAPHOSPHATASE (SYMMETRICAL) (EC 3.6.1.41) (DIADENOSINE TETRAPHOSPHATASE) (AP4A HYDROLASE) (DIADENOSINE 5,5- P1,P4-TETRAPHOSPHATE PYROPHOSPHOHYDROLASE).;3.2e-57 ; EC:3.1.3.16; PPP6_HUMAN SERINE/THREONINE PROTEIN PHOSPHATASE 6 (EC 3.1.3.16) (PP6).;1.7e-22" Metallophos // Calcineurin-like phosphoesterase;8.8e-14 d1g5ba_ // d.159.1.3 // lambda ser/thr protein phosphatase;4.37e-52 15799734; (NC_002655) diadenosine tetraphosphatase [Escherichia coli O157:H7 EDL933];5e-73 ; 15595787; (NC_002516) bis(5'-nucleosyl)-tetraphosphatase [Pseudomonas aeruginosa];e-168 "EC:3.6.1.41 // APAH_SALTY BIS(5-NUCLEOSYL)-TETRAPHOSPHATASE (SYMMETRICAL) (EC 3.6.1.41) (DIADENOSINE TETRAPHOSPHATASE) (AP4A HYDROLASE) (DIADENOSINE 5,5- P1,P4-TETRAPHOSPHATE PYROPHOSPHOHYDROLASE).;1.22e-82 /// EC:3.1.3.16 // PPP6_HUMAN SERINE/THREONINE PROTEIN PHOSPHATASE 6 (EC 3.1.3.16) (PP6).;1.21e-52" AE004495 64% similar to E. coli apaH gene product. Purine metabolism Nucleotide biosynthesis and metabolism Class 2 PA0591_at conserved hypothetical protein PA0591 Pseudomonas PA0591 "PA0591 /DEF=conserved hypothetical protein /FUNCTION=Hypothetical, unclassified, unknown" DUF525 // Protein of unknown function (DUF525);1.5e-80 "15595788; (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa];4e-68 ; 15799735; (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7 EDL933];4e-33" AE004495 72% similar to hypothetical protein ApaG [Escherichia coli]. "Hypothetical, unclassified, unknown" Class 4 PA0592_ksgA_at 2.1.1.- "rRNA (adenine-N6,N6)-dimethyltransferase" PA0592 RrnaAD Pseudomonas PA0592 "PA0592 /GENE=ksgA /DEF=rRNA (adenine-N6,N6)-dimethyltransferase /FUNCTION=Transcription, RNA processing and degradation" "179 // rRNA (adenine-N6,N6-)-dimethyltransferase activity // extended:Unknown; RrnaAD; 1.8e-77" 2.1.1.48 EC:2.1.1.48; ERM_STRSA RRNA ADENINE N-6-METHYLTRANSFERASE (EC 2.1.1.48) (MACROLIDE- LINCOSAMIDE-STREPTOGRAMIN B RESISTANCE PROTEIN).;1e-64 RrnaAD // Ribosomal RNA adenine dimethylase;1.8e-77 d1yub__ // c.66.1.9 // rRNA methyltransferase;3.02e-69 "15595789; (NC_002516) rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa];e-153 ; 15640470; (NC_002505) dimethyladenosine transferase [Vibrio cholerae];4e-75" EC:2.1.1.48 // ERM_STRSA RRNA ADENINE N-6-METHYLTRANSFERASE (EC 2.1.1.48) (MACROLIDE- LINCOSAMIDE-STREPTOGRAMIN B RESISTANCE PROTEIN).;6.01e-67 AE004495 "67% similar to rRNA (adenine-N6,N6-)-dimethyltransferase KsgA [Escherichia coli]." "Transcription, RNA processing and degradation" Class 2 PA0593_pdxA_at pyridoxal phosphate biosynthetic protein PdxA PA0593 PdxA Pseudomonas PA0593 "PA0593 /GENE=pdxA /DEF=pyridoxal phosphate biosynthetic protein PdxA /FUNCTION=Biosynthesis of cofactors, prosthetic groups and carriers" PdxA // Pyridoxal phosphate biosynthetic protein PdxA;3.1e-182 15595790; (NC_002516) pyridoxal phosphate biosynthetic protein PdxA [Pseudomonas aeruginosa];0.0 ; 16128046; (NC_000913) pyridoxine biosynthesis [Escherichia coli K12];e-108 AE004495 72% similar to pyridoxal phosphate biosynthetic protein PdxA [Escherichia coli]. Vitamin B6 metabolism "Biosynthesis of cofactors, prosthetic groups and carriers" Class 2 PA0594_surA_at peptidyl-prolyl cis-trans isomerase SurA PA0594 Rotamase Pseudomonas PA0594 "PA0594 /GENE=surA /DEF=peptidyl-prolyl cis-trans isomerase SurA /FUNCTION=Adaptation, protection; Chaperones & heat shock proteins; Translation, post-translational modification, degradation" 5.2.1.8 EC:5.2.1.8; PIN1_HUMAN PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 (EC 5.2.1.8).;3.5e-29 Rotamase // PPIC-type PPIA